Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COL2A1	Gene	0	3.19	0.11	4.29	17.75	16.10	1.13	0.69
2	380518	Transcript	0	0	0	0	0	0	0	0
3	354516	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	337299	Transcript	0	0	0	0	0	0	0	0
5	395281	Transcript	0	0	0	0	0	0	0	0
6	360091	Transcript	0	0.05	0.00	0.00	0.00	0.30	0.00	0.00
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.62	0.00	0.00
8	ER1b	ExonRegion	0	0.04	0.00	0.31	0.00	1.10	0.00	0.00
9	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	1.18	0.00	0.00
10	ER1c	ExonRegion	0	0.95	0.00	0.48	1.07	4.45	0.51	0.00
11	E1a_E3a	KnownJunction	0	0.88	0.00	0.69	0.00	8.25	1.66	0.00
12	ER1d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	0	2.28	0.00	0.94	1.86	8.79	2.80	0.00
16	E3a_E6a	KnownJunction	0	4.72	0.00	0.89	0.00	1.18	1.47	0.00
17	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER3b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E5a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER6a	ExonRegion	0	4.48	0.00	0.68	0.00	9.72	1.23	0.00
24	ER7a	ExonRegion	0	4.45	0.00	0.35	0.00	17.64	0.26	0.00
25	E7a_E8b	KnownJunction	0	2.02	0.00	0.00	0.00	16.00	0.00	0.00
26	ER8a	ExonRegion	0	0.19	0.00	0.00	0.00	1.21	0.00	0.00
27	ER8b	ExonRegion	0	3.46	0.00	0.11	0.00	13.97	0.54	0.00
28	E8a_E9a	KnownJunction	0	2.65	0.00	0.00	0.00	7.49	1.21	0.00
29	ER9a	ExonRegion	0	4.82	0.31	1.27	0.00	12.54	1.23	0.00
30	E9a_E10a	KnownJunction	0	4.96	1.18	1.48	0.00	21.23	0.00	0.00
31	ER10a	ExonRegion	0	4.51	0.74	0.97	0.93	14.85	0.10	0.00
32	E10a_E11a	KnownJunction	0	2.97	0.00	0.00	0.00	9.71	0.00	0.00
33	ER11a	ExonRegion	0	2.26	0.58	2.04	1.21	11.37	0.00	0.00
34	E11a_E12a	KnownJunction	0	0.93	1.63	1.80	0.00	10.74	0.00	0.00
35	ER12a	ExonRegion	0	2.49	1.05	0.98	0.00	14.67	0.00	0.00
36	E12a_E13a	KnownJunction	0	3.49	0.00	0.57	0.00	16.11	0.00	0.00
37	ER13a	ExonRegion	0	3.03	0.00	0.15	0.00	11.62	0.00	0.00
38	E13a_E14a	KnownJunction	0	0.90	0.00	0.62	0.00	9.29	0.00	0.00
39	ER14a	ExonRegion	0	0.51	0.00	0.68	0.00	6.66	0.00	0.00
40	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	11.50	0.00	0.00
41	ER15a	ExonRegion	0	1.98	0.00	0.72	1.04	11.17	0.00	0.00
42	E15a_E16a	KnownJunction	0	2.62	0.00	0.86	1.68	11.94	0.00	0.00
43	ER16a	ExonRegion	0	2.56	0.00	0.41	1.80	12.19	0.00	0.00
44	E16a_E17a	KnownJunction	0	2.25	0.00	0.00	1.63	12.93	0.00	0.00
45	ER17a	ExonRegion	0	0.46	0.00	0.93	0.67	10.20	0.00	0.00
46	E17a_E18a	KnownJunction	0	1.00	0.00	0.69	0.00	11.04	0.00	0.00
47	ER18a	ExonRegion	0	0.00	0.00	1.61	1.25	9.48	0.11	0.00
48	E18a_E19a	KnownJunction	0	0.00	0.00	2.23	1.68	7.88	0.00	0.00
49	ER19a	ExonRegion	0	0.91	0.00	0.80	0.72	9.63	1.23	0.00
50	E19a_E20a	KnownJunction	0	1.37	0.00	0.76	0.00	11.69	1.31	0.00
51	ER20a	ExonRegion	0	3.31	0.00	0.68	0.00	11.18	0.49	0.00
52	E20a_E21a	KnownJunction	0	4.11	0.00	0.00	0.00	9.71	0.00	0.00
53	ER21a	ExonRegion	0	4.00	0.00	0.51	0.00	9.34	0.20	0.00
54	E21a_E22a	KnownJunction	0	0.82	0.00	1.35	0.00	9.75	0.00	0.00
55	ER22a	ExonRegion	0	2.97	0.70	2.27	0.72	9.71	0.78	0.00
56	E22a_E23a	KnownJunction	0	4.86	1.31	1.49	1.68	12.26	0.00	0.00
57	ER23a	ExonRegion	0	5.02	0.51	1.10	2.13	13.59	1.14	0.00
58	E23a_E24a	KnownJunction	0	3.66	0.00	0.89	1.27	16.83	1.63	0.00
59	ER24a	ExonRegion	0	2.76	0.93	0.44	1.37	12.28	0.71	0.00
60	E24a_E25a	KnownJunction	0	4.76	0.00	0.65	3.28	7.58	1.55	0.00
61	ER25a	ExonRegion	0	3.29	0.00	1.14	2.56	10.09	1.11	0.49
62	E25a_E26a	KnownJunction	0	0.00	0.00	0.68	1.49	9.68	0.00	0.82
63	ER26a	ExonRegion	0	1.22	0.00	0.55	0.82	6.56	0.00	0.22
64	E26a_E27a	KnownJunction	0	1.03	0.00	0.00	2.95	8.78	0.00	0.00
65	ER27a	ExonRegion	0	1.89	0.00	0.50	4.04	6.85	0.00	0.15
66	E27a_E28a	KnownJunction	0	1.00	0.00	0.89	4.25	5.07	0.00	0.62
67	ER28a	ExonRegion	0	1.20	0.00	0.24	3.72	7.73	0.00	0.44
68	E28a_E29a	KnownJunction	0	1.70	0.00	0.00	4.06	7.84	0.00	0.00
69	ER29a	ExonRegion	0	2.06	0.00	0.00	4.76	10.24	0.00	0.00
70	E29a_E30a	KnownJunction	0	1.03	0.00	0.00	2.76	13.85	0.00	0.00
71	ER30a	ExonRegion	0	1.02	0.00	0.00	2.38	11.98	0.00	0.00
72	E30a_E31a	KnownJunction	0	0.73	0.00	0.00	0.00	15.75	0.00	0.00
73	ER31a	ExonRegion	0	1.32	0.00	0.58	0.32	15.31	0.75	0.00
74	E31a_E32a	KnownJunction	0	2.07	0.00	1.55	1.22	19.09	1.66	0.00
75	ER32a	ExonRegion	0	0.84	0.00	1.33	1.25	20.80	0.98	0.00
76	E32a_E33a	KnownJunction	0	0.70	0.00	0.00	0.00	20.89	0.00	0.00
77	ER33a	ExonRegion	0	0.94	0.00	0.00	0.18	16.99	0.14	0.00
78	E33a_E34a	KnownJunction	0	0.78	0.00	0.00	0.00	10.93	0.00	0.00
79	ER34a	ExonRegion	0	2.99	0.00	0.60	0.00	11.85	1.23	0.00
80	E34a_E35a	KnownJunction	0	3.49	0.00	1.58	0.00	16.51	1.26	0.00
81	ER35a	ExonRegion	0	2.36	0.00	1.35	0.00	15.62	0.44	0.00
82	E35a_E36a	KnownJunction	0	1.03	0.00	0.00	0.00	15.19	0.00	0.00
83	ER36a	ExonRegion	0	2.36	0.00	0.10	0.00	15.87	0.00	0.00
84	E36a_E37a	KnownJunction	0	4.97	0.00	0.00	0.00	8.44	0.00	0.00
85	ER37a	ExonRegion	0	3.59	0.00	0.00	1.39	7.41	0.00	0.00
86	E37a_E38a	KnownJunction	0	1.69	0.00	0.00	1.68	3.92	0.00	0.00
87	ER38a	ExonRegion	0	1.54	0.00	0.00	0.99	5.50	0.00	0.00
88	E38a_E39a	KnownJunction	0	1.69	0.00	0.00	0.00	7.10	0.00	0.00
89	ER39a	ExonRegion	0	3.27	0.00	0.00	2.49	7.98	0.00	0.00
90	E39a_E40a	KnownJunction	0	2.77	0.00	0.00	2.57	5.00	0.00	0.00
91	ER40a	ExonRegion	0	3.60	0.00	0.45	0.76	9.91	0.00	0.00
92	E40a_E41a	KnownJunction	0	1.75	0.00	0.83	0.00	15.70	0.00	0.00
93	ER41a	ExonRegion	0	1.71	0.00	0.59	0.00	8.34	0.00	0.00
94	E41a_E42a	KnownJunction	0	0.92	0.00	0.00	0.00	3.20	0.00	0.00
95	ER42a	ExonRegion	0	1.57	0.00	1.04	0.46	5.74	0.00	0.00
96	E42a_E43a	KnownJunction	0	2.77	0.00	0.82	1.68	6.92	0.00	0.00
97	ER43a	ExonRegion	0	4.04	0.00	0.33	1.55	4.06	0.00	0.00
98	E43a_E44a	KnownJunction	0	4.44	0.00	0.00	1.68	3.16	0.00	0.00
99	ER44a	ExonRegion	0	2.96	0.00	0.01	1.04	7.69	0.00	0.00
100	E44a_E45a	KnownJunction	0	1.69	0.00	0.00	0.00	9.77	0.00	0.00
101	ER45a	ExonRegion	0	4.72	0.57	0.63	0.24	8.89	0.58	0.00
102	E45a_E46a	KnownJunction	0	3.19	0.00	0.00	1.68	4.24	0.00	0.00
103	ER46a	ExonRegion	0	2.39	0.00	0.48	0.53	9.46	0.86	0.00
104	E46a_E47a	KnownJunction	0	3.05	0.00	0.00	0.00	1.18	0.00	0.00
105	ER47a	ExonRegion	0	2.92	0.00	0.86	0.87	8.69	0.42	0.00
106	E47a_E48a	KnownJunction	0	1.72	0.00	0.59	0.00	11.11	1.66	0.00
107	ER48a	ExonRegion	0	1.29	0.00	1.00	0.14	16.30	0.89	0.00
108	E48a_E49a	KnownJunction	0	2.47	0.00	0.82	0.00	15.54	0.00	0.00
109	ER49a	ExonRegion	0	2.15	0.81	2.36	13.75	12.11	0.00	0.24
110	E49a_E50a	KnownJunction	0	3.24	0.00	5.06	12.11	17.84	1.07	1.39
111	ER50a	ExonRegion	0	2.60	0.02	4.37	23.99	17.16	0.50	0.55
112	E50a_E51a	KnownJunction	0	3.40	0.00	5.82	35.22	9.54	1.42	0.54
113	ER51a	ExonRegion	0	2.33	0.00	9.31	37.62	18.81	1.19	1.92
114	E51a_E52a	KnownJunction	0	0.85	0.00	6.47	26.87	16.71	1.50	1.68
115	ER52a	ExonRegion	0	3.17	0.00	7.93	37.18	18.25	1.59	1.51
116	E52a_E53a	KnownJunction	0	3.74	0.00	7.80	40.07	10.88	1.66	0.73
117	ER53a	ExonRegion	0	2.98	0.00	9.16	34.78	15.70	2.86	0.60
118	E53a_E54a	KnownJunction	0	2.47	0.00	11.50	39.07	20.61	1.02	0.00
119	ER54a	ExonRegion	0	5.35	0.00	9.65	52.14	24.21	2.89	1.41
120	E54a_E55a	KnownJunction	0	6.93	0.00	13.28	69.11	37.67	7.66	1.55
121	ER55a	ExonRegion	0	9.66	0.00	15.67	89.10	43.09	3.65	2.34
122	E55a_E56a	KnownJunction	0	10.61	0.00	12.93	80.49	48.57	5.65	2.87
123	ER56a	ExonRegion	0	7.43	0.00	16.64	82.38	53.82	4.11	2.90
124	E56a_E57a	KnownJunction	0	3.09	0.00	11.83	89.10	54.04	5.20	1.43
125	ER57a	ExonRegion	0	4.07	0.00	12.61	41.45	26.70	2.06	2.57