Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC009533.10	Gene	0	1.51	1.86	0.62	3.82	12.41	1.57	0.54
2	341155	Transcript	0	1.81	1.64	1.03	2.81	9.88	0.97	0.76
3	ER1a	ExonRegion	0	0.19	0.00	0.00	0.00	0.40	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	1.10	0.60	0.21	1.30	2.77	1.91	0.00
6	E2a_E3a	KnownJunction	0	0.70	1.10	0.00	0.00	11.34	1.13	0.59
7	ER3a	ExonRegion	0	1.73	4.59	0.00	2.36	6.43	4.41	0.00
8	E3a_E4a	KnownJunction	0	4.62	6.86	0.00	1.68	16.18	1.10	0.89
9	E4_Aa	NovelBoundary	0	0.67	0.00	0.00	0.00	7.84	0.00	0.00
10	ER4a	ExonRegion	0	1.69	2.91	0.33	4.45	17.61	3.37	0.32
11	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER5a	ExonRegion	0	0.15	1.10	0.00	1.10	6.09	0.00	0.00
13	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER6a	ExonRegion	0	1.00	2.37	0.88	5.40	11.74	0.02	0.11
15	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER7a	ExonRegion	0	3.75	5.56	1.36	7.45	45.78	1.03	1.59
17	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER8a	ExonRegion	0	1.77	1.01	1.18	3.41	6.53	1.78	0.98
19	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER9a	ExonRegion	0	1.52	2.06	0.91	1.43	2.60	0.92	0.67
21	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER10a	ExonRegion	0	1.49	2.25	0.68	5.52	3.50	2.43	0.67
23	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER11a	ExonRegion	0	2.32	1.91	0.64	2.87	3.08	2.42	0.23
25	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER12a	ExonRegion	0	1.04	3.67	0.00	11.53	7.49	1.77	0.19
27	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER13a	ExonRegion	0	1.72	6.18	0.00	9.02	24.08	0.47	1.20
29	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER14a	ExonRegion	0	0.75	4.92	0.31	8.57	20.43	0.00	0.61
31	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER15a	ExonRegion	0	0.81	3.38	0.44	7.95	18.69	0.00	0.87
33	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER16a	ExonRegion	0	2.47	1.86	0.89	3.47	32.28	0.77	1.21
35	E16a_E17a	KnownJunction	0	2.47	1.37	0.89	7.18	34.26	0.00	0.67
36	ER17a	ExonRegion	0	2.61	1.56	2.02	3.42	24.08	1.78	0.79
37	E17a_E18a	KnownJunction	0	2.55	2.81	0.55	0.00	5.37	1.45	0.00
38	I17	Intron	0	0.49	0.43	0.08	0.36	7.60	0.86	0.00
39	I17_SR1	SilentIntronRegion	0	0.57	0.29	0.11	0.22	7.80	0.15	0.00
40	I17_AR2	ActiveIntronRegion	0	0.73	1.33	0.00	0.00	7.50	0.00	0.00
41	E18_Aa	NovelBoundary	0	0.98	4.39	0.00	4.14	17.13	1.31	0.00
42	ER18a	ExonRegion	0	1.40	2.56	0.09	3.33	21.79	0.89	0.00
43	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	1.60	0.00	0.00	0.00
44	I18	Intron	0	2.12	1.15	0.48	0.30	14.11	0.29	0.16
45	I18_SR1	SilentIntronRegion	0	2.14	1.16	0.48	0.30	14.19	0.29	0.16
46	E19a_E20a	KnownJunction	0	37.77	10.25	33.55	9.43	56.57	4.34	20.35
47	E20_Aa	NovelBoundary	0	66.61	9.93	52.77	7.18	221.77	2.89	33.42
48	ER19a	ExonRegion	0	0.06	2.43	0.00	1.53	7.54	0.00	0.00
49	ER20a	ExonRegion	0	0.27	1.83	0.70	4.22	8.61	1.62	0.57
50	E20_Da	NovelBoundary	0	1.82	0.00	1.47	0.00	18.88	0.00	1.56
51	E20a_E21a	KnownJunction	0	0.85	0.00	0.69	1.57	10.03	1.55	2.24
52	E20a_E22a	NovelJunction	0	0.00	1.39	0.00	1.35	10.19	1.37	0.76
53	I20	Intron	0	0.33	0.66	0.19	1.90	7.80	0.00	0.00
54	I20_SR1	SilentIntronRegion	0	0.34	0.66	0.19	1.90	7.82	0.00	0.00
55	E21_Aa	NovelBoundary	0	0.88	1.60	0.00	3.17	7.77	0.00	0.00
56	ER21a	ExonRegion	0	1.35	0.37	0.94	2.04	6.54	0.41	0.93
57	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	ER22a	ExonRegion	0	3.40	3.08	1.95	9.43	27.90	0.87	1.10
59	E22_Da	NovelBoundary	0	9.86	3.84	4.34	0.00	19.73	0.00	1.55
60	E22a_E23a	KnownJunction	0	5.94	4.33	2.39	8.21	30.01	1.66	0.80
61	ER23a	ExonRegion	0	1.21	2.29	0.95	11.49	22.89	5.86	0.98
62	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	E24_Aa	NovelBoundary	0	0.00	2.71	0.85	0.00	11.76	0.00	0.00
64	ER24a	ExonRegion	0	3.47	0.03	0.84	0.06	5.53	0.40	0.00
65	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER25a	ExonRegion	0	0.94	0.00	0.00	0.00	5.12	1.57	0.28
67	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER26a	ExonRegion	0	0.97	0.00	0.00	3.27	10.43	2.85	0.51
69	ER27a	ExonRegion	0	0.00	0.00	0.00	2.08	0.11	1.72	0.00