Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 GLB1L3 Gene 0 1.14 0.18 2.39 1.05 60.81 0.46 1.40 2 410100 Transcript 0 0.20 0.00 0.56 0.41 19.54 0.00 0.76 3 389887 Transcript 0 0.00 0.00 0.00 0.00 3.73 0.00 0.00 4 299136 Transcript 0 0.01 0.00 0.51 0.15 13.12 0.00 0.32 5 IG30 Intergenic 0 0.07 0.03 0.55 0.44 8.55 0.08 0.29 6 IG30_AR3 ActiveIntergenicRegion 0 0.29 0.00 4.12 4.23 165.89 0.00 3.32 7 ER1a ExonRegion 0 0.14 0.00 1.39 1.63 66.10 0.00 3.04 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 31.70 0.00 0.86 9 ER1b ExonRegion 0 0.00 0.00 0.27 0.51 12.04 0.00 0.07 10 E1a_E2b KnownJunction 0 0.00 0.00 0.88 0.00 7.19 0.00 0.00 11 ER2a ExonRegion 0 0.00 0.00 0.30 0.58 5.59 0.00 0.15 12 E2_Ab KnownBoundary 0 0.00 0.00 1.31 3.36 18.51 0.00 0.89 13 ER2b ExonRegion 0 0.17 0.00 0.59 2.76 28.99 0.00 0.91 14 E2_Da KnownBoundary 0 0.85 0.00 2.26 3.25 80.13 0.00 0.59 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2c ExonRegion 0 0.77 0.00 2.82 2.49 72.05 0.00 1.35 17 E2b_E3b KnownJunction 0 0.92 0.00 3.06 2.49 67.08 0.00 1.78 18 ER3a ExonRegion 0 0.05 0.00 0.18 0.17 5.13 0.00 0.09 19 ER3b ExonRegion 0 0.57 0.00 2.49 1.16 60.21 0.00 0.46 20 E3a_E4a KnownJunction 0 0.83 0.00 1.62 1.33 56.36 0.00 0.00 21 ER4a ExonRegion 0 0.21 0.00 2.24 1.05 55.53 0.00 0.04 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER5a ExonRegion 0 0.58 0.00 2.39 0.90 43.01 0.00 0.54 24 E5a_E6a KnownJunction 0 1.69 0.00 2.89 1.03 51.15 0.00 1.92 25 ER6a ExonRegion 0 0.56 0.00 5.52 0.78 93.30 0.00 2.91 26 E6a_E7a KnownJunction 0 0.00 0.00 3.81 1.25 78.77 0.00 2.98 27 I6 Intron 0 0.04 0.00 0.35 0.16 13.58 0.00 0.18 28 I6_SR1 SilentIntronRegion 0 0.00 0.00 0.46 0.00 15.21 0.00 0.18 29 I6_SR3 SilentIntronRegion 0 0.00 0.00 0.25 0.43 16.21 0.00 0.32 30 ER7a ExonRegion 0 0.45 0.00 3.37 0.20 101.97 0.00 2.65 31 E7a_E8a KnownJunction 0 0.87 0.00 3.55 1.38 92.26 0.00 1.92 32 ER8a ExonRegion 0 0.20 0.00 2.27 0.00 82.14 0.00 1.07 33 E8a_E9a KnownJunction 0 0.00 0.00 4.35 0.00 76.26 0.00 0.69 34 ER9a ExonRegion 0 0.00 0.00 4.23 0.00 98.99 0.00 1.94 35 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 3.32 0.00 0.00 36 E9a_E11a KnownJunction 0 0.00 0.00 1.25 0.00 89.56 0.00 2.79 37 E9a_E15a NovelJunction 0 0.00 0.00 0.00 0.00 13.42 0.00 0.00 38 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 4.15 0.00 0.00 39 ER11a ExonRegion 0 0.00 0.00 2.07 0.50 87.61 0.00 1.09 40 E11a_E12a KnownJunction 0 0.00 0.00 5.50 1.68 101.27 0.00 0.00 41 ER12a ExonRegion 0 0.00 0.00 3.64 0.38 65.97 0.00 1.03 42 E12a_E13a KnownJunction 0 0.00 0.00 0.73 0.00 24.94 0.00 0.70 43 E12a_E14a NovelJunction 0 0.00 0.00 0.00 0.00 8.67 0.00 0.00 44 E12b_E13b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER12b ExonRegion 0 0.00 0.00 0.85 0.00 1.82 0.00 0.00 46 I12 Intron 0 0.16 0.00 0.52 0.00 14.06 0.00 0.00 47 I12_AR1 ActiveIntronRegion 0 0.16 0.00 0.52 0.00 14.11 0.00 0.00 48 ER13a ExonRegion 0 0.00 0.00 1.35 0.00 29.96 0.00 0.67 49 ER13b ExonRegion 0 0.31 0.00 3.50 0.00 72.87 0.00 0.14 50 E13a_E14a KnownJunction 0 0.98 0.00 3.26 0.00 84.21 0.00 0.00 51 I13 Intron 0 0.00 0.00 0.00 0.00 14.03 0.00 0.23 52 I13_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 14.16 0.00 0.24 53 ER14a ExonRegion 0 0.84 0.00 1.49 0.00 56.49 0.00 0.91 54 E14a_E15a KnownJunction 0 0.00 0.00 0.72 0.00 43.52 0.00 0.00 55 ER15a ExonRegion 0 0.00 0.00 1.11 0.00 81.61 0.00 0.00 56 E15a_E16a KnownJunction 0 0.00 0.00 2.41 0.00 82.00 0.00 0.00 57 ER16a ExonRegion 0 0.00 0.00 2.45 0.00 73.79 0.00 0.00 58 E16a_E17a KnownJunction 0 0.00 0.00 3.78 0.00 46.82 0.00 0.00 59 E16a_E18a NovelJunction 0 0.00 0.00 0.00 1.46 19.83 0.00 0.00 60 ER17a ExonRegion 0 0.25 0.00 3.88 0.00 61.78 0.00 0.00 61 E17a_E18a KnownJunction 0 0.95 0.00 2.82 0.00 74.90 0.00 0.82 62 ER18a ExonRegion 0 0.44 0.00 4.86 0.41 89.41 0.00 0.72 63 E18a_E19a KnownJunction 0 0.00 0.00 6.19 1.63 83.31 0.00 0.70 64 ER19a ExonRegion 0 0.98 0.00 3.87 0.52 89.04 0.00 1.65 65 E19a_E20a KnownJunction 0 0.67 0.00 3.20 0.00 85.66 0.00 2.34 66 ER20a ExonRegion 0 1.46 0.00 1.77 0.81 120.19 0.42 1.94 67 E20a_E21a KnownJunction 0 0.75 0.00 2.92 0.00 86.36 2.73 2.95 68 ER21a ExonRegion 0 5.68 1.09 5.01 2.39 75.71 2.80 2.09 69 ER21b ExonRegion 0 0.66 0.00 0.00 0.00 10.23 0.00 0.00