Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FCHSD2	Gene	0	22.11	10.61	56.50	38.63	27.16	32.42	52.68
2	409418	Transcript	0	0.94	2.19	1.06	6.60	1.21	8.93	2.80
3	311172	Transcript	0	0.00	0.00	0.00	1.16	2.19	3.11	0.00
4	409314	Transcript	0	0.00	0.00	0.00	0.01	0.42	0.00	0.00
5	409853	Transcript	0	1.15	0.70	2.59	1.21	2.43	0.60	2.25
6	409263	Transcript	0	0.00	1.63	1.09	3.14	1.04	0.00	3.18
7	ER1a	ExonRegion	0	0.94	2.19	1.06	6.60	1.21	8.93	2.80
8	E1_Ab	KnownBoundary	0	4.27	8.93	4.91	12.54	1.18	12.01	9.83
9	ER1b	ExonRegion	0	6.21	10.53	19.09	23.09	9.47	28.39	24.47
10	E1a_E2a	KnownJunction	0	12.77	17.18	38.81	37.14	18.60	30.95	40.03
11	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	1.16	2.19	3.11	0.00
12	ER2a	ExonRegion	0	21.79	16.63	57.24	36.91	21.14	28.74	54.41
13	E2_Ab	NovelBoundary	0	26.19	20.31	67.99	42.40	17.47	28.54	58.80
14	E2a_E3a	KnownJunction	0	15.17	16.92	51.49	31.05	12.54	20.66	56.74
15	ER2b	ExonRegion	0	21.31	19.40	65.16	38.03	14.33	27.63	66.22
16	ER3a	ExonRegion	0	17.71	23.03	67.72	41.26	18.61	37.61	65.88
17	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
18	E3a_E5a	KnownJunction	0	18.79	19.34	61.61	42.15	23.72	37.89	48.96
19	E4_Aa	NovelBoundary	0	20.08	2.36	19.95	1.46	6.41	4.61	11.97
20	ER4a	ExonRegion	0	0.00	0.00	0.00	0.02	2.20	0.00	0.46
21	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E5_Aa	NovelBoundary	1	8.76	0.00	24.73	0.00	0.00	0.00	0.67
23	ER5a	ExonRegion	0	27.38	10.41	76.76	51.76	29.00	35.16	65.94
24	E5a_E6a	KnownJunction	0	34.56	11.22	86.19	58.22	40.07	30.18	78.97
25	ER6a	ExonRegion	0	50.12	20.56	122.68	74.76	41.97	45.13	88.77
26	E6a_E7a	KnownJunction	0	40.52	24.51	121.95	67.38	42.99	46.95	100.16
27	ER7a	ExonRegion	0	48.89	20.97	117.90	60.62	37.63	51.98	83.78
28	E7a_E8a	KnownJunction	0	47.03	13.92	111.15	46.41	45.71	31.44	75.56
29	ER8a	ExonRegion	0	45.90	13.72	117.91	52.33	47.43	45.87	83.06
30	E8a_E9a	KnownJunction	0	40.87	16.55	101.44	57.84	48.96	44.51	78.95
31	ER9a	ExonRegion	0	49.45	12.73	117.10	61.31	53.95	39.82	79.88
32	E9a_E10a	KnownJunction	0	85.44	10.90	161.47	53.48	63.88	31.54	94.16
33	ER10a	ExonRegion	0	65.47	13.54	137.05	62.76	56.60	55.40	92.29
34	E10a_E11a	KnownJunction	0	83.38	16.31	162.33	70.76	51.80	60.89	111.53
35	ER11a	ExonRegion	1	71.07	8.47	144.07	57.56	79.61	53.27	99.16
36	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E11a_E13a	KnownJunction	0	31.24	6.96	73.46	34.41	37.67	33.42	70.40
38	ER12a	ExonRegion	0	0.00	0.00	0.00	0.03	0.18	0.00	0.00
39	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	1.08	0.00	0.00
40	ER13a	ExonRegion	0	25.73	11.30	72.97	40.48	26.73	25.03	52.80
41	E13a_E14a	KnownJunction	0	25.02	11.93	81.38	40.64	32.67	32.16	60.79
42	ER14a	ExonRegion	0	18.83	9.18	71.58	47.55	31.68	32.21	69.41
43	E14a_E15a	KnownJunction	0	16.51	8.38	66.09	42.61	35.78	36.77	56.92
44	ER15a	ExonRegion	0	22.63	8.61	74.63	41.09	30.24	37.65	72.14
45	E15a_E16a	KnownJunction	0	20.90	7.15	71.77	26.96	19.55	35.46	67.86
46	ER16a	ExonRegion	0	28.26	12.26	84.76	54.88	44.90	36.20	78.14
47	E16a_E17a	KnownJunction	0	21.71	13.19	58.03	40.42	36.70	39.99	54.19
48	E17_Ab	NovelBoundary	0	19.71	14.50	58.04	41.21	40.55	28.01	55.65
49	ER17a	ExonRegion	0	23.40	15.37	66.01	42.46	42.11	41.81	67.12
50	ER17b	ExonRegion	0	24.28	18.11	85.92	56.64	50.24	28.24	88.15
51	E17a_E18a	KnownJunction	0	30.84	16.76	90.52	57.51	47.05	25.51	89.30
52	ER18a	ExonRegion	0	30.08	19.52	72.92	59.11	51.34	37.47	81.58
53	E18_Da	KnownBoundary	0	7.79	2.36	16.25	4.36	5.90	4.50	9.11
54	E18a_E19a	KnownJunction	0	26.77	20.10	49.05	54.43	69.30	31.49	66.67
55	E18a_E20a	KnownJunction	0	0.00	1.63	1.09	3.14	1.04	0.00	3.18
56	ER18b	ExonRegion	0	4.60	2.81	10.37	4.81	7.53	2.41	7.66
57	ER19a	ExonRegion	0	26.88	13.34	60.85	58.02	47.22	58.40	88.30
58	E19a_E20a	KnownJunction	0	25.22	13.77	53.40	45.76	36.68	52.13	75.15
59	ER20a	ExonRegion	0	13.11	9.84	33.58	38.38	19.55	38.41	56.18
60	E20a_E21a	KnownJunction	0	14.79	6.83	26.80	23.68	12.70	21.84	36.06
61	ER21a	ExonRegion	0	13.09	9.85	26.40	29.51	27.88	19.70	43.77
62	E21a_E22a	KnownJunction	0	11.52	10.46	20.12	26.50	37.02	21.20	38.87
63	ER22a	ExonRegion	0	16.74	11.98	44.04	37.30	24.54	31.70	50.85
64	E22_Da	KnownBoundary	0	20.96	17.21	48.92	41.56	15.10	32.94	62.90
65	ER22b	ExonRegion	0	17.43	8.90	45.31	34.30	20.55	31.79	42.71
66	ER22c	ExonRegion	0	2.09	0.00	4.84	4.39	1.81	1.58	3.02