Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	YPEL4	Gene	0	1.14	2.89	3.89	15.40	15.33	34.37	2.55
2	300022	Transcript	0	0.73	1.72	2.38	12.65	5.51	28.84	0.73
3	IG43	Intergenic	0	0.29	0.90	1.23	2.32	12.88	0.77	2.73
4	IG43_AR1	ActiveIntergenicRegion	0	0.29	1.45	1.34	3.06	20.22	0.88	3.95
5	ER1a	ExonRegion	0	0.05	0.57	0.10	1.17	2.38	3.50	0.00
6	E1a_E2a	KnownJunction	0	0.78	1.58	0.89	6.04	0.00	16.08	0.00
7	I1	Intron	0	0.12	0.74	1.11	3.11	13.27	1.53	2.18
8	I1_AR1	ActiveIntronRegion	0	0.12	0.74	1.11	3.12	13.28	1.53	2.18
9	ER2a	ExonRegion	0	1.04	4.12	3.25	14.68	10.11	38.10	2.49
10	E2_Da	NovelBoundary	0	1.03	4.10	2.30	1.30	11.34	8.47	2.41
11	E2a_E3a	KnownJunction	0	0.00	3.18	2.39	11.41	1.13	28.97	0.00
12	I2	Intron	0	0.00	3.76	0.89	3.31	16.42	0.54	2.95
13	I2_AR1	ActiveIntronRegion	0	0.00	4.22	0.26	3.38	15.67	1.04	2.36
14	I2_SR1	SilentIntronRegion	0	0.00	3.42	1.47	3.30	17.40	0.11	3.54
15	E3_Aa	NovelBoundary	0	0.00	4.78	4.17	4.17	20.36	1.66	2.91
16	ER3a	ExonRegion	0	0.37	1.82	1.15	13.83	1.82	30.82	0.00
17	E3_Da	NovelBoundary	0	0.00	1.50	0.00	4.58	28.26	6.00	2.22
18	E3a_E4a	KnownJunction	0	0.87	0.00	1.48	12.81	1.18	18.55	0.00
19	I3	Intron	0	0.35	2.58	2.25	4.69	19.98	3.75	1.11
20	I3_AR1	ActiveIntronRegion	0	0.35	2.60	2.26	4.71	20.10	3.77	1.12
21	E4_Aa	NovelBoundary	0	1.03	4.23	1.31	7.07	14.62	0.00	1.50
22	ER4a	ExonRegion	0	1.43	0.85	5.60	16.40	11.49	38.48	0.47
23	E4_Da	NovelBoundary	0	0.92	1.26	0.00	7.59	22.89	7.32	4.89
24	E4a_E5a	KnownJunction	0	0.58	0.00	1.54	18.18	0.00	44.03	0.00
25	I4	Intron	0	0.26	0.41	2.50	3.75	22.74	3.71	3.61
26	I4_AR1	ActiveIntronRegion	0	0.26	0.41	2.52	3.77	22.93	3.74	3.63
27	E5_Aa	NovelBoundary	0	0.00	1.63	1.70	6.69	20.61	1.37	5.98
28	ER5a	ExonRegion	0	1.47	3.38	5.04	19.36	21.50	41.00	3.59
29	IG42	Intergenic	0	0.58	1.06	2.30	4.00	24.59	2.95	3.61
30	IG42_SR1	SilentIntergenicRegion	0	0.60	1.01	1.76	2.48	22.99	2.17	3.52
31	IG42_AR1	ActiveIntergenicRegion	0	0.53	1.19	3.59	7.58	28.35	4.80	3.83