Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BDNF	Gene	0	0.41	0.25	1.12	0.98	15.36	3.44	2.53
2	314915	Transcript	0	0.00	0.62	0.04	0.00	1.51	0.07	0.00
3	395981	Transcript	0	0.00	0.00	0.00	0.00	1.26	0.00	0.00
4	395983	Transcript	0	0	0	0	0	0	0	0
5	395980	Transcript	0	0	0	0	0	0	0	0
6	356660	Transcript	0	0.00	0.00	0.32	0.17	10.48	1.22	0.41
7	395986	Transcript	0	0.00	0.00	0.00	0.00	0.69	0.00	0.00
8	395978	Transcript	0	0.00	0.00	0.00	0.00	17.45	0.00	0.00
9	ER1a	ExonRegion	0	0.00	0.12	0.08	0.00	2.16	0.14	0.00
10	E1a_E6a	KnownJunction	0	0.00	1.13	0.00	0.00	0.85	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.30	0.00	0.00
12	E2a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	2.21	0.00	0.00
13	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.01	2.96	0.02
14	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.37	0.87
15	ER4a	ExonRegion	0	0.00	0.00	0.03	0.35	4.11	2.43	0.19
16	E4a_E6a	KnownJunction	0	0.00	0.00	0.60	0.00	16.85	0.00	0.63
17	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.23	0.00	0.00
18	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	1.15	0.00	0.00
19	I5_AR8	ActiveIntronRegion	0	3.51	0.33	1.83	0.00	4.04	0.67	7.95
20	I5_AR20	ActiveIntronRegion	0	0.41	0.00	1.17	0.00	8.06	0.00	1.24
21	E6_Ab	NovelBoundary	0	0.00	0.00	2.69	0.00	14.48	5.49	14.56
22	ER6a	ExonRegion	0	0.00	0.66	1.23	0.28	19.95	3.62	3.28
23	ER6b	ExonRegion	0	2.83	1.61	4.03	5.11	39.44	9.33	16.39
24	E6_Da	KnownBoundary	0	0.00	0.00	0.00	2.49	35.41	8.33	8.68
25	E6a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	17.45	0.00	0.00
26	ER6c	ExonRegion	0	0.40	0.00	2.08	3.26	44.97	8.08	9.64
27	E6_Ac	KnownBoundary	0	0.00	0.00	2.70	4.28	63.97	7.45	8.07
28	ER6d	ExonRegion	0	0.42	0.71	4.74	5.85	50.57	4.68	8.52
29	E6_Db	KnownBoundary	0	0.00	0.00	7.73	5.85	48.36	5.41	10.15
30	ER6e	ExonRegion	0	0.30	0.16	1.15	0.60	17.41	3.84	1.32
31	ER6f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	IG48_AR15	ActiveIntergenicRegion	0	4.41	0.57	2.42	0.00	3.93	0.00	12.73
33	IG48_SR8	SilentIntergenicRegion	0	0.03	0.05	0.06	0.00	50.52	0.00	0.21
34	IG48_AR13	ActiveIntergenicRegion	0	0.19	0.00	0.37	0.00	2097.09	0.00	0.57
35	IG48_SR7	SilentIntergenicRegion	0	0.24	0.00	0.08	0.00	185.18	0.00	0.53
36	IG48_AR12	ActiveIntergenicRegion	0	0.15	0.00	0.00	0.00	273.90	0.00	0.00
37	IG48_AR11	ActiveIntergenicRegion	0	1.54	0.00	0.00	0.00	174.83	0.00	0.00
38	IG48_AR10	ActiveIntergenicRegion	0	1.54	0.00	0.00	0.00	157.41	0.00	0.00
39	IG48_AR9	ActiveIntergenicRegion	0	1.54	0.00	0.00	0.00	164.05	0.00	0.00
40	IG48_AR8	ActiveIntergenicRegion	0	1.54	0.00	0.00	0.00	166.22	0.00	0.00
41	IG48_AR7	ActiveIntergenicRegion	0	1.15	0.00	0.00	0.00	167.91	0.00	0.00
42	IG48_SR6	SilentIntergenicRegion	0	0.34	0.00	0.09	0.03	174.72	0.00	0.18
43	IG48_AR6	ActiveIntergenicRegion	0	0.00	0.00	0.67	0.00	1593.10	0.00	0.35
44	IG48_SR5	SilentIntergenicRegion	0	0.62	0.00	0.62	0.00	1269.39	0.00	0.84
45	IG48_AR5	ActiveIntergenicRegion	0	0.10	0.15	0.00	0.00	1365.30	0.00	0.18
46	IG48_SR4	SilentIntergenicRegion	0	0.11	0.00	0.12	0.00	566.68	0.00	0.11