Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SPON1	Gene	0	7.52	4.50	36.44	13.47	14.97	32.70	4.66
2	310358	Transcript	0	1.80	1.70	28.00	5.26	14.28	29.57	0.76
3	ER1a	ExonRegion	1	0.00	0.00	4.88	1.28	2.26	18.43	0.00
4	E1a_E2a	KnownJunction	1	0.00	0.00	9.18	2.60	6.52	31.68	0.00
5	ER2a	ExonRegion	1	0.00	0.00	18.53	3.25	7.05	37.32	0.00
6	E2a_E3a	KnownJunction	1	0.00	0.00	26.83	3.33	7.77	32.35	0.00
7	ER3a	ExonRegion	1	0.52	0.69	27.82	3.54	13.19	35.82	0.00
8	E3a_E4a	KnownJunction	1	0.70	0.00	33.27	3.36	22.98	24.15	0.00
9	ER4a	ExonRegion	1	1.63	1.35	32.54	3.35	14.65	33.65	0.00
10	E4a_E5a	KnownJunction	1	1.03	3.26	25.84	4.06	9.84	38.03	0.00
11	ER5a	ExonRegion	1	0.52	1.81	15.06	1.01	5.53	26.61	0.00
12	E5a_E6a	KnownJunction	1	0.00	0.00	12.27	0.00	4.43	13.53	0.00
13	E6_Aa	NovelBoundary	1	0.00	0.00	11.25	0.00	1.01	10.59	0.00
14	ER6a	ExonRegion	1	1.32	0.62	31.99	2.41	15.05	24.97	0.00
15	E6a_E7a	KnownJunction	1	4.51	1.63	38.53	1.08	20.86	36.37	0.00
16	ER7a	ExonRegion	1	2.23	0.94	39.14	2.96	18.32	35.95	0.00
17	E7a_E8a	KnownJunction	0	3.04	0.00	37.82	4.42	15.56	25.73	0.00
18	ER8a	ExonRegion	1	2.23	0.58	41.66	5.58	25.16	30.16	0.00
19	E8a_E9a	KnownJunction	1	0.83	1.63	49.42	5.36	25.52	35.05	0.00
20	E9_Aa	NovelBoundary	1	2.39	0.00	5.29	18.48	0.00	4.26	0.00
21	ER9a	ExonRegion	0	3.13	3.47	49.04	10.41	20.67	37.22	0.25
22	E9_Da	NovelBoundary	0	1.49	2.36	7.21	12.92	0.00	4.77	0.00
23	E9a_E10a	KnownJunction	1	3.45	0.00	52.84	1.68	22.18	36.05	0.00
24	ER10a	ExonRegion	0	1.38	1.57	42.36	7.23	17.78	34.13	0.00
25	E10_Da	NovelBoundary	0	1.75	1.02	5.30	9.43	0.00	3.11	1.78
26	E10a_E11a	KnownJunction	0	0.00	2.73	29.86	4.66	12.91	24.07	0.00
27	E11_Aa	NovelBoundary	1	2.47	2.44	5.35	12.38	0.00	1.07	0.00
28	ER11a	ExonRegion	1	1.49	1.23	47.04	5.64	19.24	30.62	0.00
29	E11_Da	NovelBoundary	0	8.24	0.00	5.14	8.67	0.00	2.63	0.00
30	E11a_E12a	KnownJunction	1	0.00	1.58	37.19	0.00	12.66	32.29	0.00
31	I11_AR1	ActiveIntronRegion	0	3.18	4.70	2.92	8.13	0.00	9.01	1.88
32	E12_Aa	NovelBoundary	0	0.68	5.46	1.64	19.10	0.00	15.73	2.74
33	ER12a	ExonRegion	0	3.37	4.28	20.10	17.43	11.01	29.46	2.79
34	E12_Da	NovelBoundary	0	5.62	7.80	5.59	7.31	0.00	14.55	1.35
35	E12a_E13a	KnownJunction	1	0.00	0.00	9.76	1.68	5.37	22.75	0.00
36	I12	Intron	1	9.03	6.74	11.61	20.77	0.18	8.98	5.04
37	I12_AR1	ActiveIntronRegion	0	11.18	8.25	10.64	24.12	0.18	13.46	4.31
38	I12_SR1	SilentIntronRegion	1	8.61	6.45	11.83	20.14	0.18	8.09	5.19
39	E13_Aa	NovelBoundary	0	5.71	6.62	3.89	22.08	0.00	9.97	2.15
40	ER13a	ExonRegion	0	1.78	6.48	10.98	11.69	12.01	19.12	0.90
41	E13_Da	NovelBoundary	0	2.40	5.07	1.78	8.64	0.00	1.34	0.75
42	E13a_E14a	KnownJunction	1	0.80	0.00	13.61	1.27	12.63	15.22	0.00
43	E14_Aa	NovelBoundary	0	2.64	8.35	2.66	8.86	0.00	3.59	0.62
44	ER14a	ExonRegion	0	2.67	5.49	15.06	13.03	12.60	25.36	4.26
45	E14_Da	NovelBoundary	0	6.23	4.20	5.82	8.61	1.89	9.38	1.38
46	E14a_E15a	KnownJunction	1	0.00	0.00	13.78	2.74	14.50	37.12	0.00
47	I14	Intron	1	7.40	6.62	9.37	21.98	0.18	7.10	5.24
48	I14_SR1	SilentIntronRegion	1	7.42	6.63	9.39	22.03	0.18	7.12	5.25
49	E15_Aa	NovelBoundary	0	8.65	8.83	7.72	20.13	0.00	15.12	6.03
50	ER15a	ExonRegion	0	5.51	3.87	18.62	11.14	17.77	35.91	3.99
51	E15_Da	NovelBoundary	0	3.99	9.54	13.98	24.49	0.00	21.57	8.71
52	E15a_E16a	KnownJunction	1	0.00	0.00	19.00	4.20	17.22	32.00	0.00
53	I15	Intron	1	7.16	5.62	10.95	18.01	1.36	6.21	5.91
54	I15_SR1	SilentIntronRegion	1	11.38	3.95	14.24	27.13	0.58	7.01	6.68
55	I15_AR1	ActiveIntronRegion	1	7.07	5.06	11.20	22.40	1.72	7.65	5.07
56	I15_SR2	SilentIntronRegion	0	5.66	6.45	9.68	13.04	1.51	5.38	5.97
57	E16_Aa	NovelBoundary	0	6.21	9.41	9.14	16.55	0.00	7.34	10.96
58	ER16a	ExonRegion	0	5.16	7.02	25.59	13.72	16.45	32.04	5.64
59	E16_Da	NovelBoundary	0	8.41	4.73	12.24	13.03	0.00	18.06	4.06
60	E16a_E17a	KnownJunction	1	0.00	0.00	28.58	1.38	15.79	17.88	0.00
61	I16	Intron	1	11.13	4.93	12.03	15.58	2.17	5.09	7.35
62	I16_SR1	SilentIntronRegion	1	11.67	4.07	9.47	13.33	1.89	3.01	5.23
63	I16_AR1	ActiveIntronRegion	0	6.78	4.53	11.24	13.07	1.88	5.24	7.87
64	I16_SR2	SilentIntronRegion	1	13.66	6.86	17.50	21.86	2.93	8.88	10.94
65	E17_Aa	NovelBoundary	1	19.29	7.99	33.45	34.08	1.18	14.15	12.81
66	ER17a	ExonRegion	0	12.02	5.79	45.75	17.97	15.87	34.94	7.35
67	IG16	Intergenic	0	9.15	3.53	13.79	11.22	11.63	4.99	5.90
68	IG16_SR1	SilentIntergenicRegion	0	9.21	3.53	13.85	11.28	11.69	5.02	5.92