Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MADD	Gene	0	62.88	41.68	81.42	37.94	89.77	53.81	42.07
2	342922	Transcript	0	0.89	0.19	2.74	0.20	0.69	0.00	0.30
3	349238	Transcript	0	0	0	0	0	0	0	0
4	311027	Transcript	0	0	0	0	0	0	0	0
5	395342	Transcript	0	0	0	0	0	0	0	0
6	395349	Transcript	0	0	0	0	0	0	0	0
7	395344	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	406482	Transcript	0	0	0	0	0	0	0	0
9	402799	Transcript	0	0	0	0	0	0	0	0
10	407859	Transcript	0	0	0	0	0	0	0	0
11	395336	Transcript	0	1.15	0.00	1.19	0.00	0.20	0.61	0.00
12	405573	Transcript	0	0	0	0	0	0	0	0
13	402192	Transcript	0	0	0	0	0	0	0	0
14	ER1a	ExonRegion	0	0.28	0.39	1.80	0.40	0.49	0.00	0.03
15	E1a_E4a	KnownJunction	0	1.50	0.00	3.68	0.00	0.90	0.00	0.57
16	ER2a	ExonRegion	0	0.28	0.00	0.35	0.00	0.12	0.00	0.00
17	ER2b	ExonRegion	0	3.03	2.65	2.78	0.90	5.26	0.00	1.47
18	E2a_E4a	KnownJunction	0	3.02	5.31	2.05	1.41	4.24	0.00	2.28
19	ER3a	ExonRegion	0	1.15	0.00	1.19	0.00	0.20	0.61	0.00
20	ER3b	ExonRegion	0	5.38	0.00	3.42	0.00	5.55	1.23	1.38
21	ER3c	ExonRegion	0	6.34	3.21	5.25	1.95	6.09	8.23	1.95
22	E3a_E4a	KnownJunction	1	3.34	5.67	4.07	1.14	2.28	10.93	0.00
23	ER4a	ExonRegion	0	24.16	25.97	39.89	13.13	21.22	18.55	12.19
24	E4a_E5a	KnownJunction	0	42.79	37.88	45.51	18.88	35.20	30.95	17.14
25	ER5a	ExonRegion	0	37.96	51.42	64.38	38.39	50.89	61.51	32.03
26	E5a_E6a	KnownJunction	1	60.83	78.24	124.75	59.09	52.93	61.93	28.23
27	ER6a	ExonRegion	0	70.69	80.13	110.53	54.50	96.28	71.48	53.46
28	E6a_E7a	KnownJunction	0	71.87	73.38	113.17	55.21	138.22	71.23	64.13
29	ER7a	ExonRegion	0	102.86	73.79	144.87	65.98	161.70	90.52	79.32
30	E7a_E8a	KnownJunction	0	103.68	67.60	138.50	51.12	144.06	94.58	70.77
31	ER8a	ExonRegion	0	106.87	60.64	148.78	50.70	125.36	76.73	71.15
32	E8_Da	NovelBoundary	1	40.49	0.00	52.09	0.00	0.00	0.00	0.00
33	E8a_E9a	KnownJunction	0	94.38	59.61	135.67	47.52	168.08	61.93	72.47
34	ER9a	ExonRegion	0	92.66	60.46	158.79	43.41	149.43	74.92	72.19
35	E9a_E10a	KnownJunction	0	121.02	57.77	177.90	49.44	215.61	93.64	70.57
36	ER10a	ExonRegion	0	99.16	48.25	142.95	46.76	139.04	65.99	64.24
37	E10a_E11a	KnownJunction	0	172.27	35.73	213.20	44.78	151.25	79.60	68.72
38	E11_Aa	NovelBoundary	1	66.59	1.13	82.60	0.00	0.00	0.00	0.00
39	ER11a	ExonRegion	0	179.34	52.53	180.94	57.42	165.76	86.35	70.06
40	E11a_E12a	KnownJunction	0	169.44	57.69	158.16	59.79	201.25	77.00	65.81
41	ER12a	ExonRegion	0	136.68	62.65	147.70	71.56	173.51	79.36	72.39
42	E12a_E13a	KnownJunction	0	142.62	68.33	183.95	71.93	169.78	79.86	80.31
43	ER13a	ExonRegion	0	153.48	64.85	193.59	70.60	166.34	96.44	87.45
44	E13a_E14a	KnownJunction	0	91.98	47.31	96.20	68.30	158.23	63.38	61.08
45	ER14a	ExonRegion	0	103.69	57.33	128.70	46.42	123.65	63.01	70.98
46	E14a_E15a	KnownJunction	0	58.65	63.97	69.22	36.06	67.82	55.88	48.15
47	ER15a	ExonRegion	0	60.68	47.00	81.96	39.62	72.13	38.12	51.88
48	E15_Da	KnownBoundary	0	40.82	39.38	58.42	32.48	50.37	51.83	38.78
49	E15a_E16a	KnownJunction	1	14.10	19.81	26.02	5.77	39.37	5.92	18.77
50	ER15b	ExonRegion	0	31.19	25.14	45.36	30.21	38.35	35.54	26.94
51	E15b_E16a	KnownJunction	0	27.12	16.87	37.15	26.90	26.33	21.95	17.57
52	I15	Intron	0	6.23	5.05	6.75	7.40	1.45	12.35	3.99
53	I15_AR1	ActiveIntronRegion	0	6.28	5.09	6.80	7.46	1.46	12.43	4.02
54	E16_Aa	NovelBoundary	1	5.49	6.33	5.02	2.44	2.07	18.79	10.86
55	ER16a	ExonRegion	0	40.05	34.46	70.16	26.37	66.97	40.92	35.60
56	E16a_E17a	KnownJunction	0	35.15	32.71	53.16	24.11	52.28	34.09	31.23
57	ER17a	ExonRegion	0	33.77	23.75	55.88	25.56	61.15	39.71	27.39
58	E17a_E18a	KnownJunction	1	1.92	2.86	18.74	2.55	3.00	8.12	0.00
59	E17a_E19a	KnownJunction	0	42.31	21.83	43.69	31.59	46.15	36.98	30.76
60	ER18a	ExonRegion	1	2.89	1.90	23.96	1.06	5.30	5.99	1.79
61	E18a_E19a	KnownJunction	1	5.14	0.00	21.67	1.35	2.14	7.24	2.26
62	ER19a	ExonRegion	0	43.32	32.55	67.05	35.74	90.77	40.91	30.73
63	E19a_E20a	KnownJunction	0	34.51	29.98	38.33	28.58	76.49	30.50	25.98
64	ER20a	ExonRegion	0	34.04	33.17	54.48	26.43	75.15	36.19	29.65
65	E20a_E21a	KnownJunction	0	33.20	45.27	46.33	21.08	55.65	43.92	29.88
66	ER21a	ExonRegion	0	34.27	35.56	62.61	24.13	74.02	44.61	32.85
67	E21a_E22a	KnownJunction	0	41.77	29.29	86.18	36.76	64.52	44.73	38.24
68	ER22a	ExonRegion	0	46.39	30.87	78.26	30.14	70.79	40.76	33.41
69	E22a_E23a	KnownJunction	0	0.00	0.00	2.39	1.35	6.73	0.00	0.89
70	E22a_E24a	KnownJunction	0	62.35	27.30	78.91	23.95	81.65	24.74	30.97
71	E22a_E25a	NovelJunction	0	4.22	7.62	9.13	9.94	3.16	7.93	3.02
72	ER23a	ExonRegion	0	0.00	0.00	2.07	1.25	7.02	0.07	1.01
73	E23a_E24a	KnownJunction	0	0.00	0.00	0.89	0.00	3.32	0.00	0.85
74	ER24a	ExonRegion	0	60.39	37.95	86.58	28.90	103.40	31.40	47.01
75	E24a_E25a	KnownJunction	0	53.67	47.81	70.34	25.98	98.62	29.94	48.01
76	ER25a	ExonRegion	0	55.19	40.10	72.48	33.67	75.05	29.51	40.23
77	E25a_E26a	KnownJunction	0	46.28	22.49	62.70	21.02	52.56	16.64	28.09
78	ER26a	ExonRegion	0	60.21	32.82	86.59	32.63	98.01	56.58	50.85
79	E26a_E27a	KnownJunction	0	69.68	47.18	103.05	39.55	85.23	63.86	61.09
80	ER27a	ExonRegion	0	47.53	50.07	81.35	40.50	93.85	65.09	48.21
81	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	1.03	0.00	0.00	0.00
82	E27a_E29a	KnownJunction	0	52.92	50.65	89.11	38.50	88.64	62.55	46.16
83	ER28a	ExonRegion	0	0.00	0.00	0.00	1.25	0.66	0.04	0.00
84	E28a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
85	ER29a	ExonRegion	0	62.53	58.53	87.75	37.26	109.26	54.78	45.01
86	E29a_E30a	KnownJunction	0	62.37	39.96	82.20	47.63	99.20	50.60	43.78
87	ER30a	ExonRegion	0	67.38	51.07	91.13	63.08	122.72	62.70	58.42
88	E30_Da	NovelBoundary	1	23.50	0.00	39.35	0.00	0.00	0.00	2.58
89	E30a_E31a	KnownJunction	0	66.71	38.86	102.53	82.90	104.89	79.27	70.20
90	ER31a	ExonRegion	0	82.96	43.44	97.33	64.92	153.65	60.38	60.70
91	E31a_E32a	KnownJunction	0	88.62	31.16	84.43	53.83	165.04	65.04	50.07
92	ER32a	ExonRegion	0	62.54	47.85	79.00	60.40	162.06	66.67	63.99
93	E32a_E33a	KnownJunction	0	72.28	57.27	105.49	53.26	138.16	39.72	60.79
94	E33_Aa	NovelBoundary	0	13.94	9.17	9.59	10.89	2.28	9.92	2.62
95	ER33a	ExonRegion	0	85.16	62.82	96.83	54.20	156.50	54.61	70.83
96	E33a_E34a	KnownJunction	0	109.57	32.00	102.99	43.21	169.65	56.12	48.38
97	ER34a	ExonRegion	0	127.09	48.78	120.41	38.54	184.24	53.10	72.15
98	E34a_E35a	KnownJunction	0	111.54	54.15	112.03	30.21	177.94	47.62	60.18
99	ER35a	ExonRegion	0	128.31	50.66	130.82	40.61	179.41	77.21	61.60
100	E35a_E36a	KnownJunction	1	215.58	27.11	169.02	52.58	175.02	79.70	54.52
101	E35a_E37a	KnownJunction	0	5.26	9.30	12.53	3.93	3.07	13.64	6.28
102	ER36a	ExonRegion	1	154.46	47.52	131.73	52.19	142.08	65.49	50.93
103	E36a_E37a	KnownJunction	0	97.07	50.20	83.88	43.81	98.60	61.13	36.16
104	ER37a	ExonRegion	0	94.34	46.45	93.51	41.68	143.53	68.92	46.95
105	E37a_E38a	KnownJunction	0	58.87	33.65	61.17	35.03	117.78	44.62	38.82
106	ER38a	ExonRegion	0	48.13	34.04	51.12	37.90	72.52	65.62	30.59
107	ER39a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00