Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LRDD	Gene	0	18.66	16.62	9.93	8.45	37.21	10.86	15.21
2	347755	Transcript	0	11.62	8.09	8.30	5.42	32.48	10.30	12.60
3	407926	Transcript	0	23.22	7.26	11.61	4.48	20.49	5.26	11.87
4	IG34_AR1	ActiveIntergenicRegion	0	11.64	8.15	9.66	9.01	3.85	4.34	1.49
5	ER1a	ExonRegion	0	0.23	0.25	0.68	1.25	14.14	0.15	1.11
6	E1a_E2a	KnownJunction	0	2.25	1.16	1.34	2.63	14.62	2.17	3.24
7	ER2a	ExonRegion	0	21.54	20.13	13.50	9.26	30.27	13.52	14.04
8	E2_Da	NovelBoundary	0	3.69	1.34	4.05	0.00	18.26	1.18	1.78
9	E2a_E3a	KnownJunction	0	36.28	8.67	14.47	7.12	23.19	6.99	19.48
10	E2a_E3b	KnownJunction	0	14.69	4.28	9.47	4.63	10.97	6.41	11.58
11	I2	Intron	0	1.46	0.86	1.36	0.00	11.84	0.43	0.12
12	I2_AR1	ActiveIntronRegion	0	1.47	0.87	1.37	0.00	11.89	0.43	0.12
13	ER3a	ExonRegion	0	31.62	13.10	16.58	6.32	38.28	7.36	16.12
14	E3_Ab	KnownBoundary	0	23.38	13.82	15.45	6.91	27.71	12.30	12.28
15	ER3b	ExonRegion	0	23.89	18.29	16.41	13.72	36.68	14.12	18.32
16	E3_Da	NovelBoundary	0	5.62	5.31	4.07	1.46	17.31	1.61	4.20
17	E3a_E4a	KnownJunction	0	9.06	7.80	3.91	6.80	14.85	2.57	9.75
18	I3	Intron	0	8.22	5.86	4.17	2.35	13.83	3.63	3.98
19	I3_AR1	ActiveIntronRegion	0	8.27	5.91	4.20	2.37	13.92	3.66	4.01
20	E4_Aa	NovelBoundary	0	9.13	6.65	3.68	1.68	13.35	1.29	6.03
21	ER4a	ExonRegion	0	26.41	19.62	10.64	10.68	38.44	13.59	18.99
22	E4a_E5a	KnownJunction	0	26.62	7.12	16.32	11.08	31.77	3.48	15.45
23	ER5a	ExonRegion	0	30.95	15.37	12.82	13.74	52.98	10.66	18.34
24	E5a_E6a	KnownJunction	0	30.66	20.44	15.35	16.15	63.37	13.19	16.29
25	ER6a	ExonRegion	0	14.02	14.54	8.80	13.69	33.16	8.82	15.37
26	E6a_E7a	KnownJunction	0	21.46	19.81	11.98	14.71	79.35	6.73	20.72
27	ER7a	ExonRegion	0	24.83	23.28	12.62	9.69	47.48	7.68	15.58
28	E7a_E8a	KnownJunction	0	20.36	24.98	11.22	5.36	37.53	9.46	17.97
29	ER8a	ExonRegion	0	28.15	23.13	13.18	6.00	52.02	11.15	17.90
30	E8a_E9a	KnownJunction	0	23.97	18.55	7.67	7.31	43.50	9.38	15.49
31	ER9a	ExonRegion	0	13.70	18.24	7.75	6.94	44.48	10.47	17.62
32	E9a_E10a	KnownJunction	0	12.92	24.48	7.30	5.72	43.78	14.34	12.15
33	ER10a	ExonRegion	0	11.82	17.48	7.92	6.44	40.55	9.31	14.54
34	E10_Da	KnownBoundary	0	13.34	14.48	14.89	11.49	56.23	12.70	19.39
35	E10a_E11a	KnownJunction	0	1.75	0.00	3.78	0.00	0.00	1.42	0.00
36	ER10b	ExonRegion	0	9.03	10.31	8.91	7.03	46.60	12.11	15.09
37	E10b_E11a	KnownJunction	0	11.13	9.67	6.52	4.61	39.86	12.38	11.12
38	ER11a	ExonRegion	0	15.37	14.01	7.03	6.51	42.58	8.66	13.91
39	E11a_E12a	KnownJunction	0	16.41	16.37	14.05	6.72	44.79	7.72	17.86
40	ER12a	ExonRegion	0	13.84	16.74	8.49	9.22	48.75	7.49	16.20
41	E12a_E13a	KnownJunction	1	20.14	25.40	8.45	9.45	47.88	6.46	21.25
42	ER13a	ExonRegion	0	15.65	11.28	6.57	4.55	42.65	10.07	16.68
43	E13a_E14a	KnownJunction	1	12.27	6.49	5.02	2.63	25.06	14.71	10.30
44	ER14a	ExonRegion	0	9.90	11.22	6.14	7.25	39.43	10.94	13.01
45	E14a_E15a	KnownJunction	0	13.35	9.59	6.74	8.48	35.02	12.54	11.84
46	ER15a	ExonRegion	0	17.56	16.67	7.18	6.75	38.61	16.92	13.20
47	E15a_E16a	KnownJunction	1	25.20	28.24	11.37	1.25	54.64	17.74	19.16
48	ER16a	ExonRegion	0	12.92	13.19	4.18	3.88	23.89	7.23	12.08
49	IG33_AR2	ActiveIntergenicRegion	0	2.31	2.43	3.39	0.00	9.58	0.00	6.75