Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PDDC1	Gene	0	54.81	53.69	42.00	51.60	96.00	25.04	92.33
2	397472	Transcript	0	0.48	2.85	0.00	0.00	0.47	0.00	0.62
3	319863	Transcript	0	0	0	0	0	0	0	0
4	354286	Transcript	1	2.19	14.82	2.90	12.60	11.80	1.39	13.82
5	IG30_AR4	ActiveIntergenicRegion	0	5.60	2.00	3.04	0.91	9.84	0.00	8.49
6	IG30_SR2	SilentIntergenicRegion	0	5.39	0.78	3.34	1.57	7.56	0.00	6.82
7	ER1a	ExonRegion	0	11.16	43.45	10.41	56.37	72.80	18.79	32.99
8	E1a_E2a	KnownJunction	1	5.42	41.98	2.66	33.89	5.83	17.13	26.61
9	E1a_E3a	NovelJunction	0	0.00	4.49	0.89	8.45	0.00	2.49	0.89
10	ER2a	ExonRegion	1	6.15	58.19	8.03	39.66	39.88	17.93	44.09
11	E2a_E3a	KnownJunction	1	9.33	98.44	11.97	69.49	32.46	22.94	64.53
12	ER3a	ExonRegion	1	40.51	121.84	40.79	102.11	101.22	39.84	167.36
13	E3a_E4a	KnownJunction	1	35.05	98.33	32.09	81.44	285.37	43.68	187.63
14	E3a_E5a	KnownJunction	1	2.19	14.82	2.90	12.60	11.80	1.39	13.82
15	ER4a	ExonRegion	1	21.80	97.20	24.07	58.24	119.94	44.65	119.70
16	E4a_E5a	KnownJunction	1	23.63	91.03	30.49	46.43	67.54	37.04	112.13
17	ER5a	ExonRegion	1	36.23	91.42	38.03	64.16	88.60	40.70	150.38
18	E5_Da	NovelBoundary	1	5.01	17.86	0.59	2.68	7.91	2.33	10.86
19	E5a_E6a	KnownJunction	1	35.55	84.17	28.64	72.90	84.21	34.92	138.77
20	E6_Aa	NovelBoundary	0	5.59	17.23	5.65	17.23	5.16	14.61	11.48
21	ER6a	ExonRegion	0	25.70	78.28	22.43	71.30	48.83	29.65	85.09
22	E6a_E7a	KnownJunction	0	39.91	76.19	40.93	83.20	68.42	45.18	134.69
23	E6a_E8b	KnownJunction	0	0.95	2.57	0.00	0.00	0.95	0.00	1.25
24	I6	Intron	1	2.73	11.31	3.07	4.97	15.29	2.85	21.04
25	I6_AR1	ActiveIntronRegion	1	2.76	11.41	3.10	5.00	15.41	2.87	21.21
26	E7_Aa	NovelBoundary	1	4.26	29.19	7.26	15.20	12.10	11.85	33.88
27	ER7a	ExonRegion	1	32.78	79.04	36.48	78.43	86.50	32.99	124.47
28	E7_Da	NovelBoundary	1	17.82	44.40	18.39	52.45	22.52	22.19	117.37
29	E7a_E8a	KnownJunction	0	23.78	48.55	20.12	46.89	54.61	16.37	58.06
30	I7	Intron	0	3.45	13.39	2.50	9.46	20.96	3.14	15.28
31	I7_AR1	ActiveIntronRegion	0	3.52	13.64	2.55	9.63	21.36	3.21	15.54
32	E8_Aa	NovelBoundary	1	20.38	32.45	27.42	32.43	47.40	13.67	111.77
33	ER8a	ExonRegion	0	52.24	71.32	46.07	63.44	77.02	26.45	138.17
34	E8_Ab	KnownBoundary	0	89.16	69.30	78.69	68.00	105.67	17.23	161.19
35	ER8b	ExonRegion	0	64.60	76.35	68.84	81.25	99.06	38.15	174.19
36	E8_Da	KnownBoundary	1	48.52	79.76	49.56	69.84	125.29	37.14	169.30
37	E8a_E8c	KnownJunction	0	0.00	3.13	0.00	0.00	0.00	0.00	0.00
38	ER8c	ExonRegion	0	63.44	43.96	45.33	45.67	105.88	23.07	81.25
39	E8_Ac	KnownBoundary	0	23.73	50.86	14.10	53.26	34.35	20.50	39.78
40	ER8d	ExonRegion	0	21.29	41.99	18.04	36.42	26.71	17.67	44.20
41	ER8e	ExonRegion	0	10.88	18.71	8.81	19.30	25.66	4.76	16.84
42	IG29_AR2	ActiveIntergenicRegion	0	3.13	3.12	4.94	1.28	3.48	1.86	7.58