Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CARS	Gene	0	174.71	276.13	248.04	440.74	266.38	264.11	248.56
2	278224	Transcript	0	0	0	0	0	0	0	0
3	401769	Transcript	0	0	0	0	0	0	0	0
4	397114	Transcript	0	0	0	0	0	0	0	0
5	397111	Transcript	0	66.39	105.81	91.89	177.23	73.62	128.65	82.40
6	380525	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.25	0.00	0.00	0.00
8	ER1b	ExonRegion	0	53.98	80.54	65.15	158.48	137.12	72.82	120.60
9	E1a_E2a	KnownJunction	1	19.08	87.22	17.76	105.22	28.42	50.33	47.58
10	E1a_E3a	KnownJunction	0	134.99	119.38	145.11	253.19	283.57	134.88	226.55
11	ER2a	ExonRegion	0	14.26	59.36	14.05	67.25	12.77	45.23	30.54
12	E2a_E3a	KnownJunction	0	12.42	43.11	19.76	49.14	26.28	49.79	31.66
13	ER3a	ExonRegion	0	100.00	150.51	105.12	252.13	135.01	152.00	147.38
14	E3a_E4a	KnownJunction	0	5.59	23.22	8.36	43.29	2.19	22.65	16.74
15	E3a_E4b	KnownJunction	0	76.72	177.83	91.47	255.90	83.06	149.17	113.71
16	ER4a	ExonRegion	0	22.00	39.10	25.77	81.16	10.06	42.14	37.82
17	E4_Ab	KnownBoundary	0	37.07	50.89	39.43	99.94	11.71	60.19	49.17
18	ER4b	ExonRegion	0	202.81	291.51	247.04	460.23	175.53	278.61	289.23
19	E4a_E5a	KnownJunction	0	250.67	271.31	312.44	436.25	285.56	243.23	320.64
20	ER5a	ExonRegion	0	323.83	373.20	400.45	578.94	371.68	358.23	325.41
21	E5a_E6a	KnownJunction	0	312.19	436.71	381.75	602.75	254.96	422.93	292.76
22	ER6a	ExonRegion	0	261.86	374.85	352.44	499.30	278.82	335.71	280.40
23	E6a_E7a	KnownJunction	0	350.74	298.31	414.41	427.09	315.50	272.15	280.57
24	ER7a	ExonRegion	0	238.35	337.56	347.74	482.49	345.15	291.75	299.98
25	E7a_E8a	KnownJunction	0	196.84	343.00	340.00	502.97	364.05	345.40	303.97
26	ER8a	ExonRegion	0	199.90	372.38	339.73	526.04	366.91	315.72	350.09
27	E8a_E9a	KnownJunction	0	215.70	352.41	366.69	529.98	518.99	335.16	367.24
28	E8a_E10a	NovelJunction	0	1.80	4.20	2.57	18.31	0.00	14.10	0.00
29	ER9a	ExonRegion	0	209.96	333.12	359.49	545.06	425.52	299.65	389.71
30	E9a_E10a	KnownJunction	0	174.06	314.42	304.85	552.69	382.82	287.80	359.95
31	ER10a	ExonRegion	0	170.10	365.41	281.76	570.66	344.69	271.82	349.57
32	E10_Da	NovelBoundary	1	81.36	12.85	123.13	3.71	2.28	1.15	2.89
33	E10a_E11a	KnownJunction	0	203.23	359.21	331.42	601.96	337.38	283.01	418.08
34	ER11a	ExonRegion	0	165.79	311.69	266.49	509.65	305.89	262.67	320.77
35	E11a_E12a	KnownJunction	0	154.83	257.25	205.91	423.22	294.57	190.09	238.76
36	ER12a	ExonRegion	0	172.27	304.18	266.82	480.85	302.01	248.32	275.90
37	E12a_E13a	KnownJunction	0	119.00	308.22	228.45	481.03	280.07	248.30	260.90
38	ER13a	ExonRegion	0	200.91	329.94	306.98	526.19	332.21	317.34	314.02
39	E13a_E14a	KnownJunction	0	172.49	343.76	290.74	587.71	310.06	364.13	301.03
40	ER14a	ExonRegion	0	145.32	342.44	259.69	575.51	313.47	348.86	294.43
41	E14a_E15a	KnownJunction	0	220.59	346.42	316.18	521.23	459.86	285.52	296.27
42	E14a_E16a	NovelJunction	0	1.02	7.22	0.89	13.14	0.00	7.96	0.00
43	ER15a	ExonRegion	0	264.45	364.73	387.65	590.82	379.13	335.85	362.34
44	E15a_E16a	KnownJunction	0	303.62	400.30	469.54	649.62	446.33	361.93	403.16
45	ER16a	ExonRegion	0	270.14	368.04	366.60	623.17	399.76	343.02	326.44
46	E16a_E17a	KnownJunction	0	285.80	313.68	363.76	578.10	412.00	334.65	286.27
47	ER17a	ExonRegion	0	242.21	312.27	323.00	570.21	356.42	314.46	281.29
48	E17a_E18a	KnownJunction	0	209.91	323.77	257.44	567.42	327.88	333.09	255.94
49	ER18a	ExonRegion	0	212.33	340.19	273.98	543.30	325.22	325.02	264.86
50	E18a_E19a	KnownJunction	0	234.24	315.63	308.33	514.24	389.20	292.65	266.13
51	ER19a	ExonRegion	0	235.92	305.36	331.14	555.39	369.47	327.70	301.25
52	E19a_E20a	KnownJunction	0	193.14	301.20	290.53	553.23	337.70	309.89	282.63
53	ER20a	ExonRegion	0	183.05	263.71	253.23	446.32	228.97	302.80	232.20
54	E20a_E21a	KnownJunction	0	149.34	172.76	188.19	314.28	153.26	245.46	150.69
55	E20a_E22a	NovelJunction	0	0.00	1.63	0.00	6.18	0.00	9.43	0.00
56	ER21a	ExonRegion	0	203.92	221.65	246.57	378.72	270.54	282.16	233.45
57	E21_Da	NovelBoundary	1	52.44	63.34	54.91	80.73	16.30	52.18	10.56
58	E21a_E22a	KnownJunction	0	224.90	248.34	306.98	404.39	471.04	296.62	341.17
59	I21	Intron	1	63.90	61.46	56.35	88.19	24.08	47.32	11.24
60	I21_AR1	ActiveIntronRegion	0	64.13	61.69	56.56	88.53	24.17	47.49	11.28
61	E22_Aa	NovelBoundary	1	120.12	188.63	115.71	232.12	52.10	113.74	33.38
62	ER22a	ExonRegion	0	258.98	345.14	317.91	563.43	384.52	385.05	315.31
63	E22_Da	NovelBoundary	0	55.29	55.17	60.17	107.90	46.15	83.48	50.26
64	E22a_E23a	KnownJunction	0	213.98	263.58	213.26	426.82	185.78	332.34	177.18
65	E22b_E23a	KnownJunction	0	60.55	105.01	90.65	169.29	72.43	128.26	74.65
66	ER22b	ExonRegion	0	72.23	106.60	93.14	185.17	74.81	129.04	90.14
67	ER23a	ExonRegion	0	109.87	218.01	144.70	367.06	158.49	269.93	144.36
68	ER23b	ExonRegion	0	0.48	2.43	0.85	2.96	2.43	3.22	1.94