Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FGFR2	Gene	0	22.31	6.27	75.68	87.54	197.82	3.65	29.15
2	336553	Transcript	0	3.80	1.21	23.09	25.32	32.53	0.00	5.81
3	369062	Transcript	0	0.09	0.00	0.63	0.23	2.16	0.00	0.00
4	357555	Transcript	0	0	0	0	0	0	0	0
5	358487	Transcript	0	0	0	0	0	0	0	0
6	345309	Transcript	0	0	0	0	0	0	0	0
7	369061	Transcript	0	0.00	0.00	0.73	0.00	0.00	0.00	0.00
8	369060	Transcript	0	0.00	1.23	0.00	4.82	0.00	0.00	0.00
9	351936	Transcript	0	0	0	0	0	0	0	0
10	356226	Transcript	0	0	0	0	0	0	0	0
11	369058	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	369059	Transcript	0	0	0	0	0	0	0	0
13	360144	Transcript	0	1.13	0.46	1.29	0.00	2.20	0.00	0.67
14	328075	Transcript	0	0	0	0	0	0	0	0
15	359354	Transcript	0	1.25	0.41	5.82	1.71	5.55	0.00	0.69
16	369056	Transcript	0	0	0	0	0	0	0	0
17	346997	Transcript	0	0	0	0	0	0	0	0
18	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	1.49	0.00	0.00	0.00
21	ER1c	ExonRegion	0	0.00	0.00	0.00	1.25	0.00	0.00	0.00
22	ER1d	ExonRegion	0	0.05	0.05	0.28	6.61	0.08	0.00	0.45
23	E1_Ae	KnownBoundary	0	0.62	0.00	2.54	7.42	0.00	0.00	0.00
24	ER1e	ExonRegion	0	7.43	4.74	18.98	54.04	31.45	3.23	6.99
25	E1a_E2a	KnownJunction	0	9.73	5.39	49.99	111.15	127.30	3.89	19.69
26	ER2a	ExonRegion	0	14.10	6.50	56.81	133.08	121.13	4.11	28.23
27	E2_Ab	KnownBoundary	0	10.23	4.31	45.41	90.54	108.21	4.82	16.87
28	E2_Ac	KnownBoundary	0	11.97	3.97	49.06	100.70	100.81	2.87	17.26
29	ER2b	ExonRegion	0	18.57	7.49	78.52	164.18	159.07	6.13	32.66
30	ER2c	ExonRegion	0	22.49	10.28	82.01	163.08	170.18	3.78	40.36
31	E2a_E3a	KnownJunction	0	14.85	5.25	40.50	104.57	129.86	3.51	16.77
32	E2a_E4a	KnownJunction	0	6.04	4.52	27.07	28.99	40.57	0.00	6.94
33	E2a_E5a	KnownJunction	0	2.47	0.00	5.65	17.77	14.82	0.00	2.31
34	ER3a	ExonRegion	0	14.93	4.76	50.29	126.62	145.86	5.06	25.44
35	E3a_E4a	KnownJunction	0	13.25	4.54	45.30	140.95	184.28	1.61	18.00
36	ER4a	ExonRegion	0	16.15	9.50	80.90	142.09	228.53	3.13	40.32
37	E4_Da	NovelBoundary	0	1.03	1.47	9.74	36.09	7.19	0.00	2.01
38	E4a_E5a	KnownJunction	0	21.76	7.36	87.36	118.58	225.92	0.00	50.16
39	ER5a	ExonRegion	0	30.76	8.98	99.46	130.69	277.71	3.31	43.92
40	E5a_E6a	KnownJunction	0	31.66	17.39	106.80	142.96	341.46	3.81	53.99
41	ER6a	ExonRegion	0	32.45	15.66	109.89	142.04	279.67	4.03	48.25
42	E6a_E7a	KnownJunction	0	0.00	0.00	1.78	0.00	0.00	0.00	0.00
43	E6a_E8a	KnownJunction	0	25.79	14.84	85.32	115.76	211.39	2.63	34.84
44	E6a_E12a	KnownJunction	0	0.00	0.00	0.73	0.00	0.00	0.00	0.00
45	ER7a	ExonRegion	0	2.49	0.83	9.85	3.41	11.10	0.00	1.38
46	ER8a	ExonRegion	0	22.72	12.18	90.43	99.55	212.76	3.41	37.69
47	E8a_E9a	KnownJunction	0	15.14	3.76	40.64	32.13	28.47	0.00	18.76
48	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	E8a_E11a	KnownJunction	1	3.67	0.00	39.02	29.26	101.92	2.63	0.85
50	E8a_E13a	KnownJunction	0	0.00	1.23	0.00	4.82	0.00	0.00	0.00
51	ER9a	ExonRegion	0	18.90	5.57	55.00	32.09	48.25	0.30	39.93
52	E9a_E11a	NovelJunction	0	0.00	0.00	8.92	11.59	13.56	0.00	0.00
53	E9a_E12a	KnownJunction	0	19.53	8.01	48.21	27.50	31.14	1.66	30.81
54	I9	Intron	1	4.97	0.74	19.39	4.53	33.11	0.00	1.31
55	I9_SR1	SilentIntronRegion	0	5.77	0.77	18.92	5.56	30.33	0.00	1.36
56	I9_AR1	ActiveIntronRegion	1	3.61	0.68	20.38	2.77	38.21	0.00	1.24
57	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	ER10a	ExonRegion	0	0.26	0.00	1.88	0.69	6.48	0.00	0.00
59	ER11a	ExonRegion	1	7.13	1.27	52.28	47.52	164.34	2.87	1.91
60	E11a_E12a	KnownJunction	1	2.90	0.00	50.48	57.46	185.46	2.41	0.00
61	I11	Intron	0	4.50	0.60	16.15	3.79	22.98	0.00	1.54
62	I11_AR1	ActiveIntronRegion	1	8.43	0.00	24.53	5.71	30.84	0.00	1.67
63	I11_AR2	ActiveIntronRegion	1	8.53	0.00	17.82	11.10	30.45	0.00	0.74
64	I11_AR3	ActiveIntronRegion	0	9.78	0.00	21.09	8.73	29.87	0.00	1.97
65	I11_AR4	ActiveIntronRegion	0	7.12	0.00	20.36	8.93	24.89	0.00	2.15
66	ER12a	ExonRegion	0	24.05	9.05	115.66	107.81	214.12	3.12	41.15
67	E12_Da	NovelBoundary	0	11.32	1.00	30.68	21.13	62.29	1.02	6.52
68	E12a_E13a	KnownJunction	0	6.54	3.13	27.68	45.70	60.79	1.66	9.75
69	E12b_E13a	KnownJunction	0	20.80	2.36	66.97	56.21	195.81	1.66	28.06
70	ER12b	ExonRegion	0	19.72	3.64	66.27	60.89	186.94	1.23	26.76
71	ER13a	ExonRegion	0	22.97	11.35	97.49	120.55	215.73	3.82	34.58
72	E13a_E14a	KnownJunction	0	26.85	8.72	95.33	104.38	230.27	3.03	30.53
73	ER14a	ExonRegion	0	19.80	8.10	94.18	123.00	234.31	6.14	41.45
74	E14a_E15a	KnownJunction	0	24.72	6.73	98.22	160.24	283.57	2.97	43.54
75	ER15a	ExonRegion	0	25.67	7.73	104.59	139.45	280.92	6.03	44.87
76	E15a_E16a	KnownJunction	0	23.72	8.07	103.34	130.55	275.14	2.79	42.84
77	ER16a	ExonRegion	0	26.24	5.50	110.45	128.43	264.70	4.31	38.95
78	E16a_E17a	KnownJunction	0	36.05	9.27	103.31	114.78	368.89	2.60	38.84
79	ER17a	ExonRegion	0	42.40	7.70	152.59	163.03	326.95	5.72	40.80
80	E17a_E18a	KnownJunction	0	32.18	7.99	122.95	159.54	271.31	2.52	26.94
81	ER18a	ExonRegion	0	40.39	7.48	121.56	139.94	272.82	1.42	30.56
82	E18a_E19a	KnownJunction	0	39.74	6.78	116.24	151.44	301.81	0.00	32.99
83	ER19a	ExonRegion	0	34.07	7.48	106.46	134.55	428.83	3.94	42.42
84	E19a_E20a	KnownJunction	0	42.68	8.38	149.52	148.65	440.17	4.37	53.01
85	ER20a	ExonRegion	0	42.23	6.69	122.52	153.67	367.96	4.86	50.87
86	E20a_E21a	KnownJunction	0	1.95	0.00	0.00	0.00	0.97	0.00	0.00
87	E20a_E22a	KnownJunction	0	5.01	1.31	30.54	29.94	33.01	0.00	7.77
88	E20a_E23a	KnownJunction	0	30.41	5.36	63.49	118.31	246.27	1.61	33.29
89	ER21a	ExonRegion	1	22.84	9.83	15.62	7.88	49.17	8.81	10.30
90	E21_Da	NovelBoundary	0	26.85	40.41	23.01	30.48	39.95	37.89	16.25
91	ER21b	ExonRegion	0	1.13	0.46	1.29	0.00	2.20	0.00	0.67
92	ER22a	ExonRegion	0	2.60	1.10	15.63	20.70	32.05	0.00	3.85
93	E22_Da	NovelBoundary	0	7.41	0.00	21.58	33.00	64.76	1.50	7.48
94	E23_Aa	NovelBoundary	0	9.13	2.36	13.82	26.96	63.65	1.63	3.37
95	ER23a	ExonRegion	0	52.80	10.82	150.95	192.35	557.34	6.29	61.20
96	E23_Da	KnownBoundary	0	42.94	7.59	98.45	205.35	430.35	4.40	44.13
97	ER23b	ExonRegion	0	37.96	5.53	113.70	144.67	388.71	3.25	51.60
98	E23_Db	KnownBoundary	0	33.33	6.59	95.22	88.56	195.90	3.22	37.13
99	ER23c	ExonRegion	0	26.50	5.10	94.03	70.79	240.53	3.73	31.82
100	ER24a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00