Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CDC2 Gene 0 6.43 0.68 0.49 0.74 447.23 0.41 24.27 2 373811 Transcript 0 0.00 0.98 0.00 0.00 2.14 0.00 0.00 3 307250 Transcript 0 0.97 0.00 0.00 0.00 33.59 0.00 2.98 4 395284 Transcript 0 3.51 0.00 0.08 0.00 208.37 0.08 12.33 5 316629 Transcript 0 0 0 0 0 0 0 0 6 373809 Transcript 0 1.54 1.21 0.00 0.00 21.87 0.00 6.41 7 ER1a ExonRegion 0 0.00 0.33 0.00 0.00 0.25 0.00 0.00 8 E1a_E2b KnownJunction 0 0.00 1.63 0.00 0.00 4.03 0.00 0.00 9 ER1b ExonRegion 0 0.00 1.21 0.00 0.00 7.13 0.00 0.00 10 ER1c ExonRegion 0 0.97 0.00 0.00 0.00 33.59 0.00 2.98 11 ER1d ExonRegion 0 4.39 0.71 0.00 0.00 355.34 0.00 17.17 12 E1b_E2b KnownJunction 0 1.40 1.39 0.00 0.00 26.60 0.00 6.58 13 ER2a ExonRegion 0 1.54 1.21 0.00 0.00 21.87 0.00 6.41 14 ER2b ExonRegion 0 0.81 1.21 0.02 0.06 106.82 0.00 7.84 15 E2a_E3a KnownJunction 0 1.62 0.00 0.00 0.00 200.05 0.00 16.11 16 ER3a ExonRegion 0 4.68 2.11 1.20 1.60 511.89 0.66 34.74 17 E3a_E4a KnownJunction 0 3.97 1.63 1.62 1.49 472.68 1.07 35.01 18 ER4a ExonRegion 0 5.22 1.05 0.94 1.75 592.30 1.22 42.66 19 E4a_E5b KnownJunction 0 9.95 0.00 1.60 0.00 635.45 1.37 38.21 20 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 2.07 0.00 0.56 21 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4b ExonRegion 0 0.00 0.00 0.00 0.00 9.18 0.00 0.00 23 I4_SR1 SilentIntronRegion 0 1.11 1.63 0.37 0.00 98.32 0.00 1.26 24 ER5a ExonRegion 0 3.46 0.00 0.34 0.00 177.76 0.31 10.96 25 ER5b ExonRegion 0 11.82 0.00 0.29 0.60 837.39 0.69 51.57 26 E5a_E6a KnownJunction 0 10.58 0.00 0.00 0.00 646.54 0.00 38.35 27 E5b_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER6a ExonRegion 0 10.91 0.00 0.00 1.25 668.45 0.00 46.55 30 ER6b ExonRegion 0 6.79 0.57 0.54 1.11 716.28 0.65 43.15 31 E6a_E7a KnownJunction 0 4.86 2.55 0.00 0.00 593.93 1.05 37.15 32 ER7a ExonRegion 0 8.98 2.55 0.61 0.67 876.88 0.59 26.77 33 E7a_E8a KnownJunction 0 16.59 2.81 0.00 0.00 1151.81 0.00 28.83 34 ER8a ExonRegion 0 11.44 0.34 0.59 0.00 645.06 0.32 23.36 35 E8_Da KnownBoundary 0 8.31 0.00 0.00 0.00 276.03 0.00 15.79 36 ER8b ExonRegion 0 5.12 0.27 0.45 0.96 214.39 0.27 14.84 37 IG43_SR1 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 13.59 0.00 0.21 38 IG43_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 10.26 0.00 1.35