Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	ATRX	Gene	0	165.47	69.45	106.66	74.33	211.34	208.45
2	343347	Transcript	0	2.99	2.32	2.33	4.04	7.36	5.55
3	480283	Transcript	0	0.00	0.00	0.89	0.00	0.37	2.66
4	373344	Transcript	0	0	0	0	0	0	0
5	395603	Transcript	0	0.00	10.35	12.75	2.50	0.00	0.00
6	400862	Transcript	0	0	0	0	0	0	0
7	395605	Transcript	0	0	0	0	0	0	0
8	373341	Transcript	0	0.00	0.00	7.72	9.89	0.00	0.25
9	400861	Transcript	0	3.87	1.39	13.40	15.34	0.00	0.00
10	493470	Transcript	0	8.09	2.45	12.45	11.72	1.78	0.76
11	460639	Transcript	0	10.41	10.10	4.81	7.43	0.00	0.00
12	341401	Transcript	0	0	0	0	0	0	0
13	400866	Transcript	0	0.76	2.26	5.91	1.66	9.94	7.41
14	479487	Transcript	0	1.28	0.42	6.30	2.77	4.83	4.16
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	0.00	0.26	0.00	0.00	0.00	0.00
17	ER1c	ExonRegion	0	8.05	5.60	19.14	14.24	0.00	0.68
18	E1a_E2a	KnownJunction	0	19.64	7.99	69.85	56.93	0.00	0.00
19	E1a_E4b	NovelJunction	0	0.00	0.00	9.91	0.00	0.00	4.45
20	ER1d	ExonRegion	0	15.67	8.31	63.35	48.98	0.00	0.00
21	ER2a	ExonRegion	0	23.39	4.93	89.98	79.55	0.00	2.49
22	E2a_E4b	KnownJunction	0	12.53	13.95	86.81	93.25	0.00	0.00
23	ER3a	ExonRegion	0	0.00	0.00	0.00	1.23	0.00	0.00
24	ER4a	ExonRegion	0	7.74	2.77	26.79	29.44	0.00	0.00
25	ER4b	ExonRegion	0	34.17	8.57	121.27	116.88	0.00	2.96
26	E4a_E5a	KnownJunction	1	48.39	6.97	221.90	151.59	0.00	10.41
27	ER5a	ExonRegion	0	28.44	4.98	198.23	137.06	1.43	3.74
28	E5a_E6a	KnownJunction	0	25.97	3.49	182.56	142.62	8.66	5.21
29	ER6a	ExonRegion	0	27.89	9.53	158.88	101.52	2.88	4.66
30	E6a_E7a	KnownJunction	0	56.70	26.21	282.98	172.15	4.08	3.44
31	E6a_E9a	KnownJunction	0	0.00	10.35	12.75	2.50	0.00	0.00
32	E6a_E9b	KnownJunction	0	8.98	6.97	7.00	12.13	0.00	0.00
33	ER7a	ExonRegion	0	29.47	13.52	169.02	104.23	2.16	17.16
34	E7_Da	KnownBoundary	0	0.00	0.00	12.52	3.37	0.00	4.03
35	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E7a_E9a	KnownJunction	1	22.42	11.81	85.67	22.40	0.00	43.91
37	E7a_E9b	NovelJunction	0	0.00	10.12	13.72	6.63	0.00	17.21
38	ER7b	ExonRegion	0	0.00	0.00	7.72	9.89	0.00	0.25
39	ER8a	ExonRegion	0	0.00	0.00	2.68	0.00	1.12	7.98
40	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
41	ER9a	ExonRegion	0	25.34	32.20	89.07	36.08	2.26	29.16
42	ER9b	ExonRegion	0	36.83	33.57	72.84	41.07	3.56	19.53
43	E9a_E10a	KnownJunction	1	23.44	9.22	93.59	48.17	3.58	58.01
44	ER10a	ExonRegion	0	30.15	23.37	92.65	62.12	1.41	38.77
45	E10a_E11a	KnownJunction	1	64.96	39.54	116.18	87.65	5.16	142.47
46	ER11a	ExonRegion	1	51.14	23.25	174.90	107.06	4.18	65.16
47	E11_Da	KnownBoundary	0	87.61	58.44	100.19	33.82	14.73	70.52
48	E11a_E11b	KnownJunction	0	13.86	16.59	63.42	21.26	4.16	4.03
49	ER11b	ExonRegion	1	88.92	48.07	186.88	86.12	6.04	47.08
50	E11_Ab	KnownBoundary	0	134.19	33.35	279.05	159.75	8.91	117.12
51	ER11c	ExonRegion	1	247.04	92.31	198.47	154.45	23.91	336.22
52	E11_Db	KnownBoundary	1	461.86	217.50	272.73	219.01	187.28	2375.30
53	ER11d	ExonRegion	1	345.05	140.72	117.25	91.72	35.51	254.21
54	E11_Ac	KnownBoundary	0	231.44	112.49	111.40	68.73	102.38	134.16
55	ER11e	ExonRegion	1	242.41	80.20	94.22	68.30	59.84	201.69
56	E11c_E12a	KnownJunction	1	215.48	83.52	58.92	47.74	51.44	365.55
57	ER12a	ExonRegion	1	206.04	86.40	90.03	46.33	17.73	92.05
58	E12_Da	KnownBoundary	0	5.60	2.53	5.18	22.56	8.49	0.00
59	E12a_E13a	KnownJunction	0	287.54	100.17	87.10	48.56	30.71	86.48
60	ER12b	ExonRegion	0	8.09	2.45	12.45	11.72	1.78	0.76
61	ER13a	ExonRegion	1	276.73	92.92	107.91	67.01	39.11	141.30
62	E13a_E14a	KnownJunction	1	320.32	129.70	87.21	60.95	36.12	126.86
63	ER14a	ExonRegion	1	421.48	206.17	190.13	139.26	20.58	148.74
64	E14a_E15a	KnownJunction	1	288.51	198.66	73.72	62.42	56.68	318.95
65	I14_AR2	ActiveIntronRegion	1	2.11	2.08	5.43	15.08	0.00	0.00
66	ER15a	ExonRegion	1	401.47	253.09	186.10	192.35	17.10	205.31
67	E15a_E16a	KnownJunction	1	460.18	328.47	238.35	154.47	30.05	426.33
68	ER16a	ExonRegion	1	366.43	209.55	188.46	110.95	19.26	149.52
69	E16a_E17a	KnownJunction	0	496.87	202.43	153.59	120.87	26.14	74.05
70	ER17a	ExonRegion	0	263.90	125.39	92.20	89.50	14.43	23.95
71	E17a_E18a	KnownJunction	0	370.09	135.49	103.26	102.82	40.04	58.77
72	ER18a	ExonRegion	0	212.31	63.26	95.48	70.03	33.91	32.07
73	E18a_E19a	KnownJunction	0	218.97	87.41	142.43	54.21	104.21	90.51
74	ER19a	ExonRegion	0	148.79	62.69	94.35	52.70	85.83	81.07
75	E19_Da	KnownBoundary	0	20.79	0.00	0.00	6.63	0.00	0.00
76	E19a_E20a	KnownJunction	1	265.49	94.27	167.82	48.50	95.14	71.20
77	ER19b	ExonRegion	0	10.41	10.10	4.81	7.43	0.00	0.00
78	ER20a	ExonRegion	0	159.79	59.35	111.88	50.50	95.42	88.16
79	E20_Ab	KnownBoundary	0	102.50	39.65	74.34	51.44	220.66	183.03
80	ER20b	ExonRegion	0	88.14	35.10	110.02	42.88	116.80	70.72
81	E20a_E21a	KnownJunction	0	110.03	55.63	180.17	71.55	163.56	105.03
82	ER21a	ExonRegion	0	92.21	39.91	108.97	66.07	109.48	95.55
83	E21a_E22a	KnownJunction	0	105.75	32.17	185.63	83.84	263.19	202.67
84	ER22a	ExonRegion	0	91.57	43.46	84.57	38.51	189.01	175.95
85	E22a_E23a	KnownJunction	0	119.37	33.92	41.84	44.75	405.61	314.84
86	ER23a	ExonRegion	0	122.63	43.01	64.01	53.33	292.36	301.53
87	E23a_E24a	KnownJunction	0	107.62	64.40	40.93	37.41	329.20	336.75
88	ER24a	ExonRegion	0	188.73	76.57	77.29	60.39	349.31	422.27
89	E24a_E25a	KnownJunction	0	3.74	2.76	0.00	2.56	24.89	16.29
90	E24a_E26b	KnownJunction	0	245.30	59.68	51.80	45.24	729.64	1102.35
91	ER25a	ExonRegion	0	1.39	0.75	1.61	2.15	11.93	10.44
92	E25_Da	KnownBoundary	0	0.00	0.00	3.53	0.00	22.47	16.96
93	ER25b	ExonRegion	0	0.76	2.26	5.91	1.66	9.94	7.41
94	ER26a	ExonRegion	0	1.28	0.42	6.30	2.77	4.83	4.16
95	E26_Ab	KnownBoundary	0	0.00	0.00	13.83	3.04	9.32	8.98
96	ER26b	ExonRegion	1	348.44	132.04	103.98	62.11	857.92	2031.04
97	E26a_E27a	KnownJunction	1	404.86	146.52	97.11	52.36	233.14	987.66
98	ER27a	ExonRegion	1	385.54	196.93	104.03	66.66	878.41	2343.73
99	E27b_E28a	KnownJunction	0	698.19	354.46	188.65	119.84	183.95	377.38
100	ER27b	ExonRegion	1	520.09	289.47	149.90	79.71	210.33	490.57
101	ER28a	ExonRegion	0	298.72	170.95	84.48	56.91	18.23	37.87
102	E28a_E29a	KnownJunction	0	183.48	174.81	65.81	47.09	11.49	15.62
103	ER29a	ExonRegion	0	116.30	71.04	70.00	51.09	5.26	23.49
104	E29a_E30a	KnownJunction	0	118.16	83.81	99.22	78.68	32.79	52.14
105	ER30a	ExonRegion	0	92.94	47.01	93.95	48.14	9.16	28.84
106	E30a_E31a	KnownJunction	0	54.65	28.35	51.57	23.76	8.99	22.08
107	ER31a	ExonRegion	0	73.37	32.95	118.79	69.21	6.78	19.00
108	E31a_E32a	KnownJunction	0	71.64	21.43	77.87	55.62	23.64	61.04
109	ER32a	ExonRegion	0	51.08	29.59	125.79	67.37	9.68	22.43
110	E32a_E33a	KnownJunction	1	57.48	29.87	89.26	94.17	13.90	61.29
111	ER33a	ExonRegion	0	68.42	40.83	168.64	108.89	5.52	15.62
112	E33a_E34a	KnownJunction	0	116.29	69.18	235.73	182.91	3.50	5.21
113	ER34a	ExonRegion	0	74.88	51.47	182.43	131.91	6.46	1.75
114	E34a_E35a	KnownJunction	0	139.31	72.05	306.43	209.50	13.07	4.70
115	ER35a	ExonRegion	0	79.85	62.64	158.25	114.64	4.42	3.29
116	E35a_E36a	KnownJunction	0	57.67	71.43	118.35	97.00	3.58	3.78
117	ER36a	ExonRegion	0	75.19	53.69	142.30	100.33	10.02	3.95
118	E36_Da	NovelBoundary	0	0.00	0.00	46.00	20.50	5.16	0.00
119	E36a_E37a	KnownJunction	0	112.56	102.42	197.65	142.08	17.06	10.41
120	I36_AR2	ActiveIntronRegion	0	7.42	0.00	17.91	17.29	0.00	0.00
121	E37_Aa	NovelBoundary	0	14.88	0.00	40.59	40.62	8.32	0.00
122	ER37a	ExonRegion	0	87.07	74.99	338.12	293.48	15.04	6.64
123	E37a_E38a	KnownJunction	0	139.43	57.93	197.59	165.78	37.54	13.77
124	ER38a	ExonRegion	1	109.41	80.80	249.84	194.65	50.77	16.46
125	E38_Da	KnownBoundary	1	69.23	48.37	51.23	17.67	155.90	56.92
126	ER38b	ExonRegion	0	212.12	76.51	54.95	34.81	614.79	327.90
127	ER38c	ExonRegion	0	0.00	0.00	0.00	0.00	22.08	16.66