Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CASK	Gene	0	16.07	10.43	23.02	15.05	44.70	22.13
2	378154	Transcript	0	0.57	0.56	6.52	0.58	1.50	0.00
3	378163	Transcript	0	0	0	0	0	0	0
4	378158	Transcript	0	0	0	0	0	0	0
5	442742	Transcript	0	0	0	0	0	0	0
6	318588	Transcript	0	0	0	0	0	0	0
7	361962	Transcript	0	0	0	0	0	0	0
8	468986	Transcript	0	0.88	0.69	4.53	2.87	1.21	3.92
9	378166	Transcript	0	0	0	0	0	0	0
10	421587	Transcript	0	3.49	6.97	32.11	12.56	0.00	5.21
11	477823	Transcript	0	1.31	0.00	2.24	2.44	11.24	4.94
12	486402	Transcript	0	1.11	0.16	0.98	1.36	1.59	1.80
13	469265	Transcript	0	0.00	0.00	0.10	0.00	0.00	3.44
14	378179	Transcript	0	0.05	0.05	1.35	0.08	0.01	0.00
15	472704	Transcript	0	0.45	0.00	1.39	0.45	0.00	1.58
16	378168	Transcript	0	0	0	0	0	0	0
17	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
18	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
19	ER1b	ExonRegion	0	0.92	0.96	2.44	0.94	0.20	0.00
20	E1_Ac	KnownBoundary	0	11.21	0.00	3.53	0.00	5.16	0.00
21	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E1_Ae	KnownBoundary	0	0.00	0.00	6.94	0.00	0.00	0.00
23	ER1c	ExonRegion	0	7.67	1.20	11.32	3.97	1.81	0.00
24	ER1d	ExonRegion	0	8.45	0.00	15.21	6.46	1.81	0.00
25	E1_Af	KnownBoundary	0	6.39	2.42	24.76	25.17	7.32	0.00
26	ER1e	ExonRegion	0	5.14	0.90	20.20	14.15	1.99	0.00
27	ER1f	ExonRegion	0	4.71	4.43	41.61	23.86	8.48	4.27
28	E1a_E2a	KnownJunction	0	6.21	9.17	56.24	15.61	32.88	17.71
29	I1_AR2	ActiveIntronRegion	0	0.00	0.00	4.35	5.39	0.00	0.00
30	ER2a	ExonRegion	0	9.66	9.74	33.65	20.44	12.13	18.77
31	E2_Da	NovelBoundary	0	0.00	2.76	17.48	7.56	0.00	0.00
32	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	E2a_E3b	KnownJunction	0	6.69	10.46	62.33	39.80	26.30	54.66
34	ER3a	ExonRegion	0	3.52	2.77	18.10	11.49	4.82	9.87
35	ER3b	ExonRegion	0	5.39	13.77	46.16	44.23	21.11	30.48
36	E3_Da	KnownBoundary	0	0.00	0.00	0.00	3.37	5.16	8.82
37	E3a_E4a	KnownJunction	0	9.52	23.45	75.08	56.28	4.33	13.35
38	ER3c	ExonRegion	0	1.31	0.00	2.24	2.44	11.24	4.94
39	E3_Db	NovelBoundary	0	2.71	0.00	8.82	0.00	8.41	22.00
40	ER4a	ExonRegion	0	8.39	13.45	47.91	26.43	0.56	4.53
41	E4_Da	NovelBoundary	0	0.00	0.00	0.00	3.26	29.47	59.44
42	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.21
43	E4a_E6a	KnownJunction	0	10.24	14.68	19.07	21.48	4.83	5.21
44	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.60
45	ER6a	ExonRegion	0	8.68	10.56	50.71	45.24	1.68	2.69
46	E6a_E7a	KnownJunction	0	12.65	23.62	105.37	60.41	3.91	0.00
47	I6_AR1	ActiveIntronRegion	0	4.57	2.08	2.17	5.92	0.00	0.00
48	I6_AR2	ActiveIntronRegion	0	2.96	0.10	1.30	6.46	0.00	0.00
49	I6_AR4	ActiveIntronRegion	0	1.53	1.88	7.64	4.17	13.59	5.35
50	I6_AR1	ActiveIntronRegion	0	2.11	0.00	0.00	0.00	10.85	5.55
51	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	6.74	0.00	5.21
52	ER7a	ExonRegion	0	6.76	16.34	51.55	25.01	3.48	7.51
53	E7a_E9a	KnownJunction	0	5.72	15.47	34.90	20.66	8.32	23.09
54	ER8a	ExonRegion	0	0.00	0.00	0.00	1.68	0.00	0.00
55	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
56	E9_Ab	NovelBoundary	0	6.51	5.62	33.13	27.19	13.15	13.27
57	ER9a	ExonRegion	0	6.05	10.95	32.19	23.50	5.26	10.60
58	ER9b	ExonRegion	0	7.29	5.61	34.82	29.17	6.73	11.30
59	E9a_E10a	KnownJunction	0	9.64	0.00	32.85	14.79	12.74	9.32
60	ER10a	ExonRegion	0	7.98	5.13	46.49	31.86	8.01	8.86
61	E10_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	4.41	0.00
62	E10a_E11a	KnownJunction	0	2.47	0.00	45.60	21.59	25.55	4.70
63	ER10b	ExonRegion	0	3.32	0.47	2.93	2.41	4.76	5.40
64	ER11a	ExonRegion	0	8.09	1.68	51.60	41.57	20.90	8.79
65	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.21
66	E11a_E13a	KnownJunction	0	7.17	2.59	47.70	36.97	17.81	10.41
67	I11	Intron	0	3.22	0.95	0.99	0.00	7.71	6.77
68	I11_SR1	SilentIntronRegion	0	3.24	0.96	1.00	0.00	7.75	6.80
69	E12_Aa	NovelBoundary	0	6.87	24.97	6.66	3.37	34.63	35.43
70	ER12a	ExonRegion	0	0.00	0.00	0.21	0.00	0.00	1.67
71	E12_Da	NovelBoundary	0	3.43	11.53	0.00	0.00	0.00	0.00
72	E13_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	38.54	4.62
73	ER13a	ExonRegion	0	13.26	10.84	72.17	24.08	12.84	6.44
74	E13_Da	NovelBoundary	0	6.39	0.00	3.53	2.56	43.45	24.68
75	E13a_E14a	KnownJunction	0	2.59	3.49	46.79	21.04	0.00	0.00
76	E13a_E15a	KnownJunction	0	3.49	6.97	32.11	12.56	0.00	5.21
77	E14a_E15a	KnownJunction	0	3.25	0.00	24.31	8.86	0.00	0.00
78	ER14a	ExonRegion	0	3.99	2.08	50.57	22.74	0.90	0.00
79	ER15a	ExonRegion	0	7.51	13.08	53.40	31.40	5.94	3.96
80	E15a_E16b	KnownJunction	0	8.50	21.99	70.99	38.77	4.66	0.00
81	ER16a	ExonRegion	0	0.05	0.05	1.35	0.08	0.01	0.00
82	E16_Ab	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
83	ER16b	ExonRegion	0	12.56	22.29	61.20	41.55	1.20	1.39
84	E16a_E17a	KnownJunction	0	5.78	11.98	51.23	56.82	0.00	10.07
85	ER17a	ExonRegion	0	9.83	7.18	23.84	26.78	0.00	4.00
86	E17a_E18a	KnownJunction	0	22.11	2.36	2.62	9.95	0.00	3.53
87	ER18a	ExonRegion	0	15.31	15.58	36.22	36.28	1.21	4.82
88	E18_Ab	KnownBoundary	0	12.89	8.49	38.60	48.50	4.74	15.11
89	ER18b	ExonRegion	0	14.31	7.69	36.18	27.43	0.40	2.98
90	E18_Da	NovelBoundary	0	0.00	0.00	3.53	6.74	0.00	0.00
91	E18a_E19a	KnownJunction	1	43.50	3.04	63.64	31.43	0.00	10.41
92	ER19a	ExonRegion	0	16.62	13.39	58.91	32.86	1.17	8.25
93	E19_Da	NovelBoundary	0	0.00	0.00	10.59	0.00	0.00	0.00
94	E19a_E20a	KnownJunction	0	17.84	20.02	53.28	38.44	8.41	12.85
95	E20_Ab	NovelBoundary	0	15.06	0.00	43.32	31.92	12.49	12.59
96	ER20a	ExonRegion	0	14.78	9.23	57.33	32.79	5.42	6.48
97	ER20b	ExonRegion	0	18.69	8.62	49.84	23.86	3.64	7.68
98	E20a_E21a	KnownJunction	0	28.86	10.24	44.74	24.30	3.75	9.57
99	ER21a	ExonRegion	0	21.05	11.17	39.36	32.16	5.06	7.54
100	E21_Da	KnownBoundary	0	0.00	0.00	6.20	0.00	10.32	0.00
101	E21a_E22a	KnownJunction	0	0.00	0.00	11.84	9.35	0.00	0.00
102	E21a_E23a	KnownJunction	0	26.75	7.93	37.17	40.73	3.83	23.84
103	ER21b	ExonRegion	0	0.57	0.56	6.52	0.58	1.50	0.00
104	E21_Db	NovelBoundary	0	3.74	3.43	17.59	3.37	4.33	5.04
105	ER22a	ExonRegion	0	0.00	0.00	5.38	4.21	0.26	0.00
106	E22_Da	NovelBoundary	0	0.00	0.00	5.01	5.33	0.00	0.00
107	E22a_E23a	KnownJunction	0	0.00	0.00	5.52	0.00	0.00	0.00
108	E22a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
109	E23_Aa	NovelBoundary	0	0.00	0.00	10.13	0.00	0.00	0.00
110	ER23a	ExonRegion	0	13.78	3.87	30.54	34.29	3.06	10.75
111	E23a_E24a	KnownJunction	0	3.13	0.00	9.85	22.24	5.08	10.41
112	ER24a	ExonRegion	0	10.33	2.91	34.24	23.50	2.92	8.48
113	E24_Da	NovelBoundary	0	3.31	0.00	6.38	10.44	0.00	0.00
114	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
115	E24a_E26a	KnownJunction	0	21.87	15.41	28.69	25.23	0.00	4.95
116	ER25a	ExonRegion	0	0.90	0.00	2.78	0.91	0.00	3.16
117	ER26a	ExonRegion	0	15.42	6.75	31.54	25.41	2.46	8.89
118	E26a_E27a	KnownJunction	1	11.09	20.19	11.39	3.04	0.00	47.44
119	E26a_E27b	KnownJunction	0	3.74	0.00	53.91	12.02	0.00	4.62
120	E27_Aa	NovelBoundary	0	0.00	0.00	0.00	5.38	0.00	0.00
121	E27_Ab	NovelBoundary	1	5.78	8.10	8.20	5.06	0.00	27.96
122	ER27a	ExonRegion	1	9.50	12.21	14.12	5.92	1.02	20.48
123	ER27b	ExonRegion	1	17.77	12.21	69.39	19.12	9.37	11.59
124	E27a_E28a	KnownJunction	0	16.87	8.49	69.22	21.15	29.55	8.90
125	E28_Aa	NovelBoundary	0	0.00	0.00	0.00	5.44	0.00	0.00
126	ER28a	ExonRegion	0	16.40	21.96	60.19	29.26	6.87	12.78
127	E28a_E29a	KnownJunction	0	21.33	34.53	42.41	21.69	8.99	15.62
128	ER29a	ExonRegion	0	18.36	17.24	37.23	17.20	7.86	3.59
129	E29a_E30a	KnownJunction	0	15.06	2.92	12.18	18.43	8.66	25.69
130	ER30a	ExonRegion	0	17.09	18.23	21.57	14.95	13.65	7.96
131	E30a_E31a	KnownJunction	0	32.18	22.22	31.94	9.35	40.95	12.01
132	ER31a	ExonRegion	0	20.03	23.99	23.75	11.85	29.80	19.65
133	E31_Da	KnownBoundary	1	18.86	8.61	13.95	13.97	186.95	42.73
134	ER31b	ExonRegion	0	23.02	14.98	28.46	15.47	133.25	95.29
135	E31_Db	KnownBoundary	1	58.45	15.92	14.06	18.32	226.32	156.91
136	ER31c	ExonRegion	0	59.18	43.41	76.83	45.09	176.80	173.27
137	E31_Dc	KnownBoundary	0	56.88	27.11	95.52	62.09	512.48	342.21
138	E31_Dd	KnownBoundary	0	24.28	14.96	16.62	26.53	152.74	72.03
139	ER31d	ExonRegion	0	48.46	25.69	73.17	53.76	228.47	153.90
140	ER31e	ExonRegion	0	48.34	32.97	46.04	33.15	220.60	158.06
141	E31_De	KnownBoundary	0	36.45	38.64	20.72	8.48	409.52	280.16
142	ER31f	ExonRegion	0	22.29	11.47	18.35	13.18	67.75	21.46
143	IG29_SR2	SilentIntergenicRegion	0	0.50	0.00	0.00	0.00	5.51	8.25