Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	C9orf86	Gene	0	114.10	106.20	12.78	10.64	31.20	21.39
2	471502	Transcript	0	1.40	0.00	0.00	1.35	0.00	0.02
3	432842	Transcript	0	0	0	0	0	0	0
4	455983	Transcript	0	0	0	0	0	0	0
5	371671	Transcript	0	0	0	0	0	0	0
6	371673	Transcript	0	0	0	0	0	0	0
7	371675	Transcript	0	0	0	0	0	0	0
8	371663	Transcript	0	0	0	0	0	0	0
9	484471	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	311502	Transcript	0	0	0	0	0	0	0
11	357466	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	464941	Transcript	0	4.91	1.08	1.18	2.21	0.13	0.00
13	436380	Transcript	0	16.74	5.63	11.50	2.88	20.62	21.47
14	425121	Transcript	0	0	0	0	0	0	0
15	466096	Transcript	0	10.12	4.70	2.46	2.10	0.07	0.00
16	461992	Transcript	0	0	0	0	0	0	0
17	435930	Transcript	0	18.45	10.77	0.46	2.20	2.06	1.75
18	ER1a	ExonRegion	0	1.25	0.00	0.00	1.28	0.00	0.00
19	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
20	Ix_AR1	ActiveIntronRegion	0	29.85	14.23	4.64	2.35	12.42	6.45
21	ER2a	ExonRegion	0	0.60	0.00	0.00	0.74	0.00	0.09
22	E2a_E5a	KnownJunction	0	3.74	0.00	0.00	3.37	0.00	0.00
23	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E3_Ab	KnownBoundary	0	0.00	2.31	0.00	0.00	0.00	0.00
25	ER3b	ExonRegion	0	6.48	8.46	0.87	0.00	0.00	0.00
26	E3_Ac	KnownBoundary	0	37.90	69.35	8.20	0.00	22.72	0.00
27	ER3c	ExonRegion	0	120.61	126.71	20.80	10.51	3.92	3.23
28	E3a_E5a	KnownJunction	0	279.05	283.98	60.23	25.56	35.96	16.62
29	ER4a	ExonRegion	0	1.53	0.43	0.00	0.00	0.38	0.00
30	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER5a	ExonRegion	0	255.47	259.69	55.40	23.70	12.66	11.11
32	ER5b	ExonRegion	0	355.64	361.10	51.72	43.64	13.36	12.22
33	E5a_E6a	KnownJunction	0	596.66	443.78	47.25	47.69	13.82	15.62
34	ER6a	ExonRegion	0	588.64	526.45	102.54	76.69	9.40	11.11
35	ER6b	ExonRegion	0	680.73	592.44	126.71	108.71	10.81	7.58
36	E6_Da	NovelBoundary	1	30.73	26.66	0.00	12.07	0.00	0.00
37	E6a_E7c	KnownJunction	0	856.66	680.46	176.58	159.86	37.29	16.46
38	I6_SR1	SilentIntronRegion	0	18.50	11.23	3.83	5.31	0.00	0.00
39	ER7a	ExonRegion	0	13.93	7.03	3.79	2.96	0.15	0.00
40	E7_Ab	KnownBoundary	1	48.63	6.92	0.00	0.00	0.00	0.00
41	E7_Ac	KnownBoundary	0	28.56	22.95	8.77	2.72	0.00	0.00
42	ER7b	ExonRegion	0	80.13	50.05	11.26	9.89	0.66	0.25
43	ER7c	ExonRegion	0	679.28	636.41	124.25	134.97	15.75	8.05
44	E7_Da	NovelBoundary	1	0.00	0.00	0.00	12.78	0.00	0.00
45	E7a_E8a	KnownJunction	0	598.58	637.20	80.55	101.62	19.98	15.53
46	ER8a	ExonRegion	0	632.46	574.14	62.59	73.54	18.98	5.20
47	E8_Da	NovelBoundary	0	520.07	495.24	50.38	56.00	34.88	0.00
48	E8_Db	NovelBoundary	0	50.74	35.88	3.53	3.10	0.00	0.00
49	E8b_E9a	KnownJunction	0	950.12	860.67	109.98	98.42	34.13	4.87
50	ER8b	ExonRegion	0	744.83	687.90	90.52	75.40	20.79	2.26
51	I8	Intron	0	31.23	13.41	3.23	3.28	0.13	0.67
52	I8_AR1	ActiveIntronRegion	0	26.76	14.04	4.27	3.87	0.00	0.00
53	I8_SR1	SilentIntronRegion	0	28.80	10.95	1.79	1.20	0.00	0.00
54	I8_AR2	ActiveIntronRegion	0	34.13	16.44	3.80	5.47	0.31	1.26
55	I8_SR2	SilentIntronRegion	0	24.82	8.66	0.55	2.84	0.00	0.00
56	I8_AR3	ActiveIntronRegion	0	30.39	11.41	4.17	2.96	0.19	0.58
57	I8_SR3	SilentIntronRegion	0	41.38	18.76	2.62	2.76	0.00	1.27
58	I8_AR4	ActiveIntronRegion	0	29.94	15.45	1.41	0.48	0.00	1.20
59	E9_Aa	NovelBoundary	0	53.93	27.00	3.53	0.00	0.00	0.00
60	ER9a	ExonRegion	0	705.43	620.45	89.54	71.00	27.57	7.40
61	E9_Da	KnownBoundary	0	5.91	3.04	0.00	0.00	0.00	0.00
62	E9a_E9b	KnownJunction	0	26.21	2.92	0.00	2.83	5.16	0.00
63	E9a_E9c	KnownJunction	0	758.26	744.24	82.66	94.99	49.94	22.33
64	ER9b	ExonRegion	0	6.30	2.38	1.13	1.24	0.00	0.00
65	E9_Ab	KnownBoundary	0	0.00	3.26	0.00	0.00	0.00	0.00
66	E9_Ac	KnownBoundary	0	8.32	0.00	2.79	0.00	0.00	0.00
67	ER9c	ExonRegion	0	281.51	240.30	31.14	35.90	10.25	3.09
68	ER9d	ExonRegion	0	698.87	640.44	68.61	74.80	20.20	8.96
69	E9_Db	KnownBoundary	0	19.52	9.84	3.07	4.46	4.91	0.00
70	E9b_E9d	KnownJunction	0	10.97	3.37	0.00	0.00	15.15	0.00
71	E9b_E10b	KnownJunction	0	693.19	649.35	48.84	30.50	10.99	17.38
72	ER9e	ExonRegion	1	26.22	7.14	4.03	1.00	2.67	1.10
73	E9_Dc	KnownBoundary	0	30.43	6.97	3.07	0.00	0.00	5.21
74	ER9f	ExonRegion	0	9.16	3.12	0.94	0.80	0.22	0.16
75	E9_Ad	KnownBoundary	0	18.86	3.04	0.00	3.37	0.00	0.00
76	ER9g	ExonRegion	0	15.12	8.72	4.92	2.58	3.43	3.87
77	E9_Dd	KnownBoundary	0	25.37	17.77	2.39	6.63	8.99	20.57
78	ER9h	ExonRegion	0	24.69	17.00	10.31	5.94	26.63	21.15
79	E9_De	KnownBoundary	0	17.72	15.24	8.99	2.28	173.88	178.83
80	ER9i	ExonRegion	1	24.32	8.14	22.06	4.95	41.01	42.78
81	E9_Df	NovelBoundary	0	16.93	0.00	10.59	0.00	57.35	19.31
82	I9_AR1	ActiveIntronRegion	0	15.00	6.37	12.23	2.20	16.07	13.16
83	ER10a	ExonRegion	0	17.10	8.01	0.36	1.99	0.02	0.27
84	E10_Ab	KnownBoundary	0	31.82	8.32	0.00	2.77	0.00	0.00
85	ER10b	ExonRegion	0	534.76	444.80	42.23	66.01	16.10	6.81
86	E10_Da	KnownBoundary	0	13.80	5.51	6.60	0.00	0.00	0.00
87	E10a_E10c	KnownJunction	0	507.18	539.39	21.12	26.32	42.45	17.80
88	ER10c	ExonRegion	0	15.54	9.63	2.44	1.24	2.47	1.23
89	E10_Db	KnownBoundary	0	730.73	492.54	210.80	166.54	920.58	904.97
90	ER10d	ExonRegion	0	19.80	13.53	0.55	2.41	4.09	3.23
91	E10_Ac	KnownBoundary	0	23.08	16.59	3.07	0.00	0.00	0.00
92	ER10e	ExonRegion	0	271.27	250.18	15.59	17.68	2.92	3.32
93	E10_Dc	KnownBoundary	0	104.54	142.13	0.00	9.46	0.00	9.07
94	E10_Dd	KnownBoundary	0	14.10	15.47	0.00	0.00	0.00	0.00
95	E10d_E16b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
96	E10_De	KnownBoundary	0	96.77	88.08	2.96	2.34	0.00	3.95
97	E10e_E16c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
98	ER10f	ExonRegion	0	149.06	161.47	8.86	7.76	1.52	4.52
99	ER10g	ExonRegion	0	156.24	172.44	8.69	10.77	3.62	1.85
100	ER10h	ExonRegion	0	193.10	195.83	18.94	12.27	3.69	1.85
101	E10f_E11a	KnownJunction	0	291.64	263.96	35.58	18.38	4.99	3.78
102	ER11a	ExonRegion	0	288.06	326.19	25.83	19.68	5.41	3.11
103	E11_Da	KnownBoundary	0	368.23	336.23	24.93	11.58	27.30	7.64
104	E11a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
105	ER11b	ExonRegion	0	361.52	317.27	19.30	18.53	13.84	9.63
106	E11b_E12a	KnownJunction	0	470.90	382.24	26.19	21.26	20.23	35.43
107	ER12a	ExonRegion	0	447.78	406.60	42.14	35.34	13.42	19.31
108	E12a_E13a	KnownJunction	0	462.10	447.43	29.66	36.16	47.86	91.18
109	E12a_E13b	KnownJunction	0	13.20	2.81	3.53	6.63	0.00	0.00
110	ER13a	ExonRegion	0	567.84	491.55	59.85	45.79	21.38	55.44
111	E13_Ab	KnownBoundary	0	757.48	536.24	70.82	51.00	54.44	122.41
112	ER13b	ExonRegion	0	547.58	467.95	52.27	46.95	32.38	96.32
113	E13a_E14a	KnownJunction	0	612.68	451.54	53.62	26.26	54.77	261.10
114	ER14a	ExonRegion	0	470.74	443.28	80.37	43.44	44.30	135.13
115	E14a_E15a	KnownJunction	0	429.57	385.00	53.74	26.32	122.11	325.00
116	E15_Aa	NovelBoundary	0	14.64	3.49	0.00	0.00	9.24	12.68
117	ER15a	ExonRegion	0	340.39	377.60	52.41	28.27	63.22	93.66
118	E15_Da	NovelBoundary	0	405.28	394.28	51.57	30.18	101.46	85.97
119	E15b_E16a	KnownJunction	0	500.25	555.82	127.11	73.13	87.06	46.34
120	ER15b	ExonRegion	0	406.24	426.82	85.13	55.77	50.16	32.02
121	ER16a	ExonRegion	0	194.13	226.87	32.63	22.96	39.95	18.42
122	E16_Ab	KnownBoundary	0	6.27	29.92	0.00	0.00	9.74	13.60
123	E16_Ac	KnownBoundary	1	24.89	74.75	6.43	0.00	16.06	17.38
124	ER16b	ExonRegion	1	42.23	118.42	2.17	0.00	18.08	16.66
125	ER16c	ExonRegion	0	265.63	291.69	7.40	5.68	321.58	146.06
126	E16_Da	KnownBoundary	0	491.33	429.77	8.77	14.74	920.17	877.93
127	ER16d	ExonRegion	0	191.60	265.23	6.00	8.44	496.66	335.96
128	IG36_SR2	SilentIntergenicRegion	0	2.28	7.71	0.00	0.00	0.00	0.00