Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	C9orf117	Gene	0	3.39	2.16	0.74	0.55	0.77	0.03
2	496009	Transcript	0	0.53	0.16	0.00	0.00	0.07	0.00
3	373295	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	373293	Transcript	0	3.74	0.00	0.00	0.00	0.00	0.00
5	464092	Transcript	0	0.96	0.56	0.09	0.09	0.54	0.04
6	461104	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	0.80	0.00	0.00	0.82	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
10	Ix_AR1	ActiveIntronRegion	0	8.07	2.80	2.37	0.48	3.62	1.25
11	ER2a	ExonRegion	0	5.81	2.32	1.21	0.60	1.01	0.00
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3b	KnownJunction	0	2.65	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	8.58	5.26	2.52	1.49	0.00	0.00
15	E3_Ab	KnownBoundary	0	16.39	17.77	7.06	5.82	0.00	0.00
16	ER3b	ExonRegion	0	4.02	11.47	3.99	2.83	0.00	0.00
17	E3_Da	NovelBoundary	0	7.11	5.23	0.00	3.37	0.00	0.00
18	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
19	Ix	Intron	0	6.09	6.00	3.14	0.35	0.29	0.59
20	Ix_SR1	SilentIntronRegion	0	6.12	6.02	3.15	0.35	0.29	0.60
21	E4_Aa	NovelBoundary	0	11.09	4.95	3.02	3.37	4.41	9.24
22	ER4a	ExonRegion	0	1.28	4.19	1.85	0.00	0.51	0.00
23	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	Ix_AR1	ActiveIntronRegion	0	8.62	4.28	1.14	0.63	0.00	0.00
25	E5_Aa	NovelBoundary	0	12.71	6.24	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	3.98	2.43	0.00	0.00	0.00	0.00
27	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
29	ER5b	ExonRegion	0	0.95	1.45	0.00	0.00	0.00	0.00
30	E6_Aa	NovelBoundary	0	0.00	10.46	0.00	0.00	0.00	0.00
31	ER6a	ExonRegion	0	1.22	5.53	0.92	0.43	0.00	0.00
32	E6_Ab	KnownBoundary	0	0.00	6.97	2.79	3.10	0.00	0.00
33	E6_Da	KnownBoundary	0	2.83	6.97	0.00	0.00	0.00	0.00
34	E6a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	ER6b	ExonRegion	0	2.11	8.66	2.17	2.15	0.00	0.00
36	ER6c	ExonRegion	0	12.29	4.17	3.01	3.40	0.75	0.00
37	E6_Ac	KnownBoundary	0	21.81	3.49	3.53	0.00	0.00	0.00
38	E6_Ad	KnownBoundary	0	10.18	6.64	0.00	0.00	0.00	0.00
39	ER6d	ExonRegion	0	19.29	6.45	2.32	0.00	0.12	0.00
40	ER6e	ExonRegion	0	10.54	3.21	0.11	1.20	2.01	0.00
41	E6b_E7a	KnownJunction	0	7.05	0.00	0.00	0.00	0.00	0.00
42	E6b_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
43	E6b_E8c	KnownJunction	0	3.74	0.00	0.00	0.00	0.00	0.00
44	ER7a	ExonRegion	0	4.40	2.53	0.00	0.00	0.00	0.00
45	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
46	E7a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
47	E7a_E8c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
48	E8_Aa	NovelBoundary	0	12.41	31.16	0.00	3.37	0.00	0.00
49	ER8a	ExonRegion	0	0.00	0.81	0.00	0.00	0.35	0.00
50	E8_Ab	KnownBoundary	0	0.00	0.00	2.56	0.00	8.66	0.00
51	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	0.25	0.00
52	E8_Da	KnownBoundary	0	0.00	5.96	0.00	0.00	9.74	0.00
53	E8_Db	KnownBoundary	0	2.95	5.06	0.00	0.00	34.79	13.10
54	ER8c	ExonRegion	0	0.00	0.00	0.00	0.00	1.81	0.00
55	ER8d	ExonRegion	0	2.87	1.67	0.28	0.27	1.63	0.11
56	E8_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
57	ER8e	ExonRegion	0	3.05	0.00	1.83	0.00	1.00	0.00
58	E8_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	5.08	0.00
59	ER8f	ExonRegion	0	0.74	1.10	0.38	0.00	0.44	0.00
60	E8_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
61	ER8g	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00