Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MAPKAP1	Gene	0	72.08	37.32	29.76	17.80	97.66	46.40
2	394057	Transcript	0	0.00	0.52	0.00	0.54	0.00	1.06
3	394063	Transcript	0	0	0	0	0	0	0
4	265960	Transcript	0	0	0	0	0	0	0
5	373505	Transcript	0	0	0	0	0	0	0
6	394060	Transcript	0	11.35	14.53	1.66	1.10	54.05	40.68
7	373511	Transcript	0	4.04	0.00	3.10	0.00	3.32	0.00
8	373503	Transcript	0	0.00	0.00	12.24	0.00	0.00	0.00
9	350766	Transcript	0	0	0	0	0	0	0
10	433483	Transcript	0	0.28	0.00	0.29	0.00	0.00	0.25
11	373496	Transcript	0	0	0	0	0	0	0
12	427078	Transcript	0	0	0	0	0	0	0
13	373498	Transcript	0	0	0	0	0	0	0
14	373497	Transcript	0	0	0	0	0	0	0
15	448439	Transcript	0	0.22	0.00	1.35	0.22	0.92	0.57
16	468896	Transcript	0	0.00	0.00	1.95	0.76	0.00	0.33
17	473837	Transcript	0	1.71	0.34	0.91	0.83	0.00	0.00
18	420643	Transcript	0	0.00	0.54	0.59	0.00	0.00	0.96
19	497932	Transcript	0	0.00	0.46	0.41	0.20	0.00	0.00
20	437973	Transcript	0	0.00	0.00	1.59	1.26	0.58	0.00
21	496063	Transcript	0	1.87	0.55	0.00	2.30	0.00	0.00
22	444226	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
23	483937	Transcript	0	1.68	0.24	2.22	0.49	0.00	0.00
24	496658	Transcript	0	0.00	3.15	0.00	0.00	0.00	0.00
25	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	3.15	0.00	0.00
27	ER1b	ExonRegion	0	1.11	0.00	3.20	0.00	0.00	0.00
28	E1_Af	KnownBoundary	0	0.00	2.76	6.26	0.00	0.00	0.00
29	ER1c	ExonRegion	0	4.46	0.00	10.38	0.00	0.00	0.00
30	E1_Ag	KnownBoundary	1	20.13	3.21	36.89	0.00	12.90	9.07
31	ER1d	ExonRegion	0	6.33	0.00	10.86	0.00	0.00	0.00
32	ER1e	ExonRegion	1	6.33	0.00	11.95	0.00	1.81	0.93
33	ER1f	ExonRegion	1	8.45	0.00	20.90	0.00	5.42	1.85
34	ER1g	ExonRegion	1	14.03	6.62	17.32	2.95	4.28	3.40
35	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E1a_E3a	KnownJunction	1	97.13	20.75	57.95	4.78	9.66	7.05
37	E1a_E4a	KnownJunction	0	0.00	0.00	12.24	0.00	0.00	0.00
38	E1a_E5a	KnownJunction	0	0.00	0.00	6.66	2.66	0.00	0.00
39	I1_SR1	SilentIntronRegion	0	0.68	0.45	6.34	5.24	0.00	0.00
40	ER2a	ExonRegion	0	0.85	0.00	0.88	0.00	0.00	0.75
41	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	I2_AR1	ActiveIntronRegion	0	0.00	0.00	15.36	7.69	0.00	0.00
43	I2_AR4	ActiveIntronRegion	0	2.82	1.39	2.17	2.87	46.99	23.45
44	E3_Aa	NovelBoundary	0	0.00	0.00	13.26	2.61	0.00	0.00
45	ER3a	ExonRegion	0	77.67	32.83	64.21	31.73	7.75	6.08
46	E3_Ab	KnownBoundary	0	82.25	48.60	57.27	45.56	13.98	8.31
47	ER3b	ExonRegion	0	58.55	35.44	75.34	53.05	11.55	19.33
48	E3_Da	KnownBoundary	0	64.65	32.45	74.74	50.95	45.70	79.51
49	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	ER3c	ExonRegion	0	73.97	23.50	118.63	64.70	24.32	35.61
51	E3_Db	NovelBoundary	0	0.00	0.00	12.41	6.04	0.00	0.00
52	E3b_E4a	KnownJunction	0	67.19	18.79	150.74	66.44	51.11	86.64
53	ER4a	ExonRegion	0	62.03	19.69	130.14	49.75	24.71	37.55
54	ER4b	ExonRegion	0	68.47	36.21	99.00	48.83	22.38	37.86
55	E4b_E5a	KnownJunction	0	85.08	85.49	102.86	68.95	28.22	70.94
56	ER4c	ExonRegion	0	78.12	60.33	99.77	63.43	17.41	33.80
57	ER5a	ExonRegion	0	78.19	39.40	88.23	45.26	18.20	17.03
58	E5_Ab	KnownBoundary	1	98.22	19.97	42.35	16.86	45.20	23.59
59	ER5b	ExonRegion	0	81.05	43.93	58.76	29.79	33.69	13.91
60	E5_Da	NovelBoundary	0	46.58	46.23	51.92	30.29	53.52	16.12
61	E5b_E6a	KnownJunction	0	0.00	0.00	2.62	2.28	0.00	0.00
62	E5b_E10a	KnownJunction	0	106.95	93.87	59.89	53.29	50.52	13.27
63	ER5c	ExonRegion	0	81.64	76.18	67.59	45.36	28.83	11.00
64	E6_Aa	NovelBoundary	0	0.00	3.49	12.01	2.28	0.00	8.56
65	ER6a	ExonRegion	0	0.00	0.00	3.24	0.00	0.00	1.00
66	E6_Da	NovelBoundary	0	0.00	3.43	15.83	0.00	0.00	0.00
67	E6a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
68	ER7a	ExonRegion	0	1.41	0.00	1.06	1.58	0.00	0.00
69	E7_Ab	KnownBoundary	0	3.62	6.30	2.96	6.25	0.00	0.00
70	ER7b	ExonRegion	0	1.83	0.12	2.17	1.75	0.00	0.28
71	E7_Da	NovelBoundary	0	6.21	0.00	2.85	6.09	4.33	0.00
72	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
74	ER8a	ExonRegion	0	0.00	1.63	1.78	0.00	0.00	2.87
75	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
76	ER9a	ExonRegion	0	0.00	2.31	0.00	0.00	0.00	0.00
77	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
78	ER10a	ExonRegion	0	88.01	64.94	54.85	38.75	13.07	6.93
79	E10_Ab	KnownBoundary	0	84.78	42.18	45.20	29.69	26.72	4.79
80	ER10b	ExonRegion	0	89.97	52.66	46.44	37.82	36.84	11.11
81	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
82	E10a_E12a	KnownJunction	0	115.27	60.18	22.26	26.81	64.09	32.99
83	ER11a	ExonRegion	0	0.43	0.00	2.70	0.44	1.85	1.13
84	ER12a	ExonRegion	0	110.81	66.94	32.43	29.84	27.66	18.79
85	ER12b	ExonRegion	0	116.28	50.03	69.32	41.40	74.59	36.51
86	E12_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	3.75	0.00
87	E12b_E13a	KnownJunction	0	173.72	66.31	71.04	53.50	270.35	105.28
88	ER12c	ExonRegion	0	0.00	0.00	1.59	1.26	0.58	0.00
89	ER13a	ExonRegion	0	161.90	77.17	129.70	75.32	72.88	45.52
90	E13a_E15a	KnownJunction	0	14.46	20.59	0.00	0.00	75.16	64.73
91	E13a_E16a	KnownJunction	1	133.29	75.59	56.24	57.91	70.17	19.31
92	E13a_E17a	KnownJunction	1	74.36	17.66	43.04	18.32	23.64	29.22
93	ER13b	ExonRegion	0	0.00	1.04	0.00	1.08	0.00	1.85
94	I13	Intron	1	0.59	0.00	1.22	2.72	4.57	21.29
95	I13_SR1	SilentIntronRegion	1	0.59	0.00	1.22	2.73	4.59	21.37
96	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.26
97	I14_SR2	SilentIntronRegion	0	0.26	0.92	7.31	5.54	0.00	0.00
98	I14_AR8	ActiveIntronRegion	0	1.08	0.86	10.13	5.77	0.00	0.00
99	I14_AR14	ActiveIntronRegion	0	9.71	12.05	4.35	0.00	8.50	8.70
100	I14_AR15	ActiveIntronRegion	0	9.89	12.47	4.35	1.47	12.47	17.44
101	I14_AR16	ActiveIntronRegion	1	4.22	7.79	2.17	4.31	16.95	35.64
102	ER15a	ExonRegion	0	8.25	8.48	3.32	2.20	32.93	16.62
103	ER16a	ExonRegion	1	108.08	54.50	44.75	41.72	45.03	4.27
104	E16_Ab	KnownBoundary	1	139.91	46.46	53.51	40.40	98.97	0.00
105	ER16b	ExonRegion	1	126.23	55.35	89.89	48.86	60.28	2.94
106	E16_Da	KnownBoundary	0	3.74	3.32	6.55	0.00	0.00	0.00
107	E16a_E17a	KnownJunction	1	123.28	55.35	118.18	55.46	112.45	18.22
108	E16a_E20a	KnownJunction	0	8.07	0.00	6.20	0.00	4.83	0.00
109	ER16c	ExonRegion	0	3.71	1.02	1.67	0.91	0.00	0.00
110	E16_Db	NovelBoundary	0	19.34	9.79	0.00	10.44	0.00	0.00
111	E17_Aa	NovelBoundary	0	0.00	0.00	9.28	6.14	0.00	0.00
112	ER17a	ExonRegion	0	269.13	122.00	187.49	89.18	107.50	31.25
113	E17_Ab	KnownBoundary	1	350.99	146.24	114.82	95.42	163.06	42.65
114	ER17b	ExonRegion	0	239.89	110.86	138.93	114.25	87.91	26.62
115	E17a_E18a	KnownJunction	0	2.83	0.00	0.00	3.21	0.00	0.00
116	E17a_E20a	KnownJunction	0	233.37	135.83	204.65	139.30	122.36	50.04
117	E17a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
118	ER18a	ExonRegion	0	2.79	1.65	0.00	3.68	0.00	0.00
119	E18a_E19b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
120	I18_AR3	ActiveIntronRegion	0	1.88	1.23	1.41	2.44	76.67	49.98
121	ER19a	ExonRegion	0	1.68	0.24	2.22	0.49	0.00	0.00
122	E19_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
123	ER19b	ExonRegion	0	1.06	1.03	3.15	1.06	0.00	0.00
124	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
125	ER20a	ExonRegion	0	295.86	156.75	145.86	73.71	130.03	56.48
126	E20_Da	NovelBoundary	0	0.00	0.00	12.98	3.15	0.00	0.00
127	E20a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
128	E20a_E23a	KnownJunction	0	290.68	196.52	71.67	52.36	225.15	115.52
129	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
130	E21_Da	NovelBoundary	0	3.31	16.31	3.24	0.00	0.00	0.00
131	E21a_E23a	KnownJunction	0	0.00	6.30	0.00	0.00	0.00	0.00
132	ER22a	ExonRegion	0	0.00	0.00	2.03	1.00	0.00	0.00
133	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
134	E23_Aa	NovelBoundary	0	0.00	0.00	9.79	3.37	0.00	0.00
135	ER23a	ExonRegion	0	241.60	175.02	68.70	57.68	135.60	52.38
136	E23_Da	NovelBoundary	0	5.72	0.00	3.13	5.65	0.00	0.00
137	E23a_E24a	KnownJunction	0	330.32	202.03	96.15	60.79	338.60	161.45
138	ER24a	ExonRegion	0	198.27	137.08	49.97	39.70	134.94	57.13
139	E24_Da	KnownBoundary	0	180.71	77.22	29.49	15.99	128.18	65.91
140	ER24b	ExonRegion	0	104.11	78.83	25.62	15.38	145.29	48.93
141	E24_Db	KnownBoundary	0	94.96	79.08	6.49	10.44	492.50	159.52
142	ER24c	ExonRegion	0	115.39	56.29	12.62	8.29	268.45	155.04
143	E24_Dc	KnownBoundary	0	164.32	56.08	22.54	6.36	418.59	364.71
144	ER24d	ExonRegion	0	151.65	68.77	26.20	15.87	218.08	123.16
145	E24_Dd	KnownBoundary	1	251.39	44.10	31.94	12.94	143.75	36.69
146	ER24e	ExonRegion	0	172.80	79.20	28.68	17.77	433.24	201.58
147	ER24f	ExonRegion	0	0.00	0.00	0.00	0.00	1.81	0.00