Order SeqName SeqType IsAE Frontal_mRNA Amygdala_mRNA Frontal_Ribo Amygdala_Ribo Frontal_Ampl Amygdala_Ampl 1 C9orf84 Gene 0 1.02 0.70 2.18 2.43 2.74 5.09 2 374283 Transcript 0 0.59 0.38 0.98 2.64 5.35 6.53 3 374287 Transcript 0 0 0 0 0 0 0 4 318737 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 5 394778 Transcript 0 5.59 0.00 1.71 5.20 0.02 0.00 6 394777 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 7 394779 Transcript 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.00 0.00 0.00 2.10 0.00 0.00 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.00 0.07 0.00 0.00 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 12 ER2a ExonRegion 0 0.00 0.10 0.00 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 14 I2_AR1 ActiveIntronRegion 0 2.11 4.16 8.69 6.46 0.00 0.34 15 ER3a ExonRegion 0 0.00 3.75 0.00 0.02 1.11 1.13 16 E3_Da NovelBoundary 0 0.00 7.26 3.53 7.72 0.00 0.00 17 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 19 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 20 E5_Aa NovelBoundary 0 3.19 0.00 0.00 5.00 9.07 5.21 21 ER5a ExonRegion 0 5.59 0.00 1.71 5.20 0.02 0.00 22 E5_Ab KnownBoundary 0 9.70 0.00 6.43 6.96 0.00 0.00 23 ER5b ExonRegion 0 1.97 0.00 1.57 4.51 3.14 0.11 24 E5_Da NovelBoundary 0 6.39 0.00 0.00 5.49 0.00 0.00 25 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 26 E6_Aa NovelBoundary 0 0.00 0.00 3.13 2.34 9.07 12.93 27 ER6a ExonRegion 0 0.00 0.85 3.57 0.00 2.19 2.23 28 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 29 E7_Aa NovelBoundary 0 0.00 0.00 16.28 19.30 0.00 8.65 30 ER7a ExonRegion 0 0.00 0.42 6.55 6.50 0.73 4.47 31 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 32 E8_Aa NovelBoundary 0 0.00 0.00 6.49 3.32 0.00 16.71 33 ER8a ExonRegion 0 0.00 0.00 1.21 3.19 0.94 1.83 34 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 35 ER9a ExonRegion 0 0.00 0.00 1.47 0.00 0.00 7.54 36 E9_Da NovelBoundary 0 0.00 0.00 2.90 0.00 10.15 0.00 37 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 38 ER10a ExonRegion 0 0.00 0.00 3.08 0.00 0.00 0.00 39 E10_Da NovelBoundary 0 0.00 0.00 14.52 0.00 0.00 0.00 40 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 41 ER11a ExonRegion 0 0.00 0.00 4.59 12.13 0.00 0.00 42 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 43 E12_Aa NovelBoundary 0 0.00 0.00 0.00 2.88 0.00 18.64 44 ER12a ExonRegion 0 0.00 1.37 1.51 0.00 0.00 1.38 45 E12_Da NovelBoundary 0 0.00 0.00 2.56 0.00 0.00 26.11 46 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 47 ER13a ExonRegion 0 0.00 0.09 1.74 0.00 0.00 1.38 48 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 49 E14_Aa NovelBoundary 0 0.00 0.00 3.36 0.00 29.55 91.09 50 ER14a ExonRegion 0 0.66 0.65 2.81 2.02 23.75 70.54 51 E14_Da KnownBoundary 0 0.00 0.00 0.00 0.00 43.95 57.93 52 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 53 ER14b ExonRegion 0 1.17 0.77 1.96 3.19 10.70 13.06 54 E14_Db NovelBoundary 0 0.00 0.00 0.00 0.00 12.90 0.00 55 E15_Aa NovelBoundary 0 0.00 0.00 12.92 18.87 0.00 0.00 56 ER15a ExonRegion 0 0.00 0.00 3.56 3.15 0.00 0.00 57 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 58 ER16a ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 59 E16_Da NovelBoundary 0 6.63 3.49 9.56 5.93 0.00 0.00 60 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 61 ER17a ExonRegion 0 0.00 0.89 1.87 0.00 0.00 0.00 62 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 63 E17a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 64 E18_Aa NovelBoundary 0 0.00 3.26 12.92 5.60 0.00 0.00 65 ER18a ExonRegion 0 1.39 0.00 1.57 3.04 0.00 0.00 66 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 67 E19_Aa NovelBoundary 0 2.83 0.00 2.62 5.93 0.00 0.00 68 ER19a ExonRegion 0 4.56 0.00 0.92 2.84 0.00 0.00 69 E19_Da NovelBoundary 0 0.00 0.00 3.53 12.13 0.00 0.00 70 E19a_E20a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 71 I19 Intron 0 0.91 0.45 4.54 6.52 0.13 1.20 72 I19_SR1 SilentIntronRegion 0 0.91 0.45 4.55 6.54 0.13 1.20 73 ER20a ExonRegion 0 0.00 0.00 0.00 2.12 0.00 0.00 74 E20_Da NovelBoundary 0 0.00 0.00 10.30 2.28 0.00 0.00 75 E20a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 76 ER21a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 77 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 78 ER22a ExonRegion 0 0.00 1.76 1.84 5.49 0.00 0.00 79 E22a_E23a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 80 E23_Aa NovelBoundary 0 0.00 0.00 9.05 9.79 0.00 0.00 81 ER23a ExonRegion 0 1.36 0.00 1.40 1.39 0.00 0.00 82 E23a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 83 ER24a ExonRegion 0 0.00 0.00 0.14 0.00 0.00 0.00 84 E24a_E25a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 85 E25_Aa NovelBoundary 0 0.00 0.00 9.17 3.04 0.00 0.00 86 ER25a ExonRegion 0 0.00 0.00 1.23 2.68 0.00 2.31 87 E25_Da NovelBoundary 0 0.00 0.00 2.73 0.00 0.00 8.73 88 E25a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 89 E26_Aa NovelBoundary 0 0.00 0.00 3.42 10.11 0.00 0.00 90 ER26a ExonRegion 0 0.00 0.00 1.76 0.00 0.00 0.00 91 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 92 I26_AR1 ActiveIntronRegion 0 0.00 0.43 1.21 0.45 4.97 13.41 93 I26_SR2 SilentIntronRegion 0 0.00 0.00 2.17 0.00 5.13 14.16 94 E27_Aa NovelBoundary 0 0.00 0.00 10.19 3.04 15.65 17.88 95 ER27a ExonRegion 0 0.00 0.00 2.50 0.00 0.00 6.18 96 E27_Da NovelBoundary 0 0.00 0.00 0.00 3.32 9.24 4.28 97 E27a_E28a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 98 E28_Aa NovelBoundary 0 0.00 3.26 21.69 18.70 4.25 0.00 99 ER28a ExonRegion 0 6.40 3.16 1.10 1.06 0.10 0.21 100 E28_Da NovelBoundary 0 0.00 0.00 15.09 12.13 0.00 0.00 101 E28a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 102 I28_AR1 ActiveIntronRegion 0 1.28 2.12 0.00 3.67 23.50 12.41 103 E29_Aa NovelBoundary 0 6.21 6.81 0.00 3.37 15.40 7.81 104 ER29a ExonRegion 0 2.34 1.15 2.92 1.88 5.56 3.51 105 E29a_E30a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 106 I29_AR2 ActiveIntronRegion 0 0.00 0.00 9.66 7.26 2.34 0.34 107 I29_AR3 ActiveIntronRegion 0 3.21 0.00 6.38 5.61 1.66 10.26 108 I29_SR3 SilentIntronRegion 0 3.04 0.00 4.12 4.32 4.36 28.44 109 ER30a ExonRegion 0 1.28 0.00 1.19 3.43 1.66 2.69 110 E30_Da KnownBoundary 0 0.00 0.00 2.68 2.61 0.00 4.03 111 ER30b ExonRegion 0 0.04 0.00 0.71 5.28 0.00 0.64 112 E30_Db KnownBoundary 0 0.00 0.00 0.00 6.36 0.00 0.00 113 ER30c ExonRegion 0 0.35 4.39 0.00 4.43 0.00 1.30 114 E30_Dc KnownBoundary 0 0.00 10.46 0.00 2.28 0.00 5.21 115 ER30d ExonRegion 0 0.87 2.05 1.43 2.24 0.00 1.42 116 IG34_AR1 ActiveIntergenicRegion 0 4.05 0.00 4.23 6.30 6.82 7.71