Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	RECK	Gene	0	13.35	7.31	9.42	8.64	17.96	11.45
2	377966	Transcript	0	11.22	7.89	13.87	12.96	5.83	2.92
3	377964	Transcript	0	0	0	0	0	0	0
4	475774	Transcript	0	3.33	0.70	8.86	3.25	6.39	3.00
5	479053	Transcript	0	3.24	0.80	3.05	1.00	6.59	9.60
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
8	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
9	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1c	ExonRegion	0	0.00	0.00	0.00	0.00	0.79	0.00
12	ER1d	ExonRegion	0	0.44	0.95	4.85	0.00	2.29	2.02
13	E1a_E2a	KnownJunction	0	3.37	9.17	6.32	0.00	19.39	25.27
14	I1_AR3	ActiveIntronRegion	0	3.98	2.71	1.09	0.83	26.03	13.64
15	E2_Aa	NovelBoundary	0	0.00	0.00	6.66	0.00	0.00	9.82
16	ER2a	ExonRegion	0	9.70	5.88	12.78	3.54	17.47	8.57
17	E2_Da	NovelBoundary	0	2.77	2.59	3.24	3.26	13.32	4.11
18	E2a_E3a	KnownJunction	0	7.23	0.00	0.00	0.00	33.54	16.46
19	E2a_E4a	KnownJunction	0	3.49	2.42	10.08	6.31	0.00	4.20
20	I2	Intron	0	4.21	1.05	3.23	2.55	13.45	12.27
21	I2_SR1	SilentIntronRegion	0	4.21	1.05	3.23	2.55	13.45	12.27
22	E3_Aa	NovelBoundary	1	7.17	3.26	0.00	3.32	63.68	167.75
23	ER3a	ExonRegion	0	6.46	1.65	13.35	3.29	7.18	1.85
24	E3_Da	NovelBoundary	0	7.11	0.00	3.53	0.00	55.60	47.35
25	E3a_E4a	KnownJunction	0	3.56	3.26	28.58	6.20	0.00	0.00
26	I3	Intron	0	1.66	0.33	2.39	1.01	1.42	6.98
27	I3_SR1	SilentIntronRegion	0	1.66	0.33	2.39	1.02	1.42	6.99
28	ER4a	ExonRegion	0	5.63	6.18	24.07	9.79	3.74	7.16
29	E4_Da	NovelBoundary	0	0.00	3.43	0.00	0.00	27.30	17.55
30	E4a_E5a	KnownJunction	0	0.00	8.55	16.17	17.73	10.15	9.49
31	ER5a	ExonRegion	0	0.00	6.23	8.16	9.61	3.42	3.10
32	E5_Da	NovelBoundary	0	10.00	0.00	0.00	2.50	0.00	0.00
33	E5a_E6a	KnownJunction	0	0.00	3.09	2.96	6.20	0.00	0.00
34	ER6a	ExonRegion	0	3.24	8.41	4.67	7.67	2.19	2.35
35	E6a_E7a	KnownJunction	0	3.01	3.49	2.62	11.42	4.66	9.24
36	I6	Intron	0	3.65	1.34	5.05	3.83	15.11	7.51
37	I6_AR1	ActiveIntronRegion	0	2.11	4.16	11.03	2.15	12.38	2.14
38	I6_AR2	ActiveIntronRegion	0	0.22	1.08	4.12	3.23	15.49	5.25
39	I6_SR2	SilentIntronRegion	0	6.57	2.02	5.25	3.68	19.68	11.08
40	E7_Aa	NovelBoundary	0	3.74	8.61	3.53	0.00	12.74	13.10
41	ER7a	ExonRegion	0	0.88	1.73	6.88	8.84	1.96	1.93
42	E7_Da	NovelBoundary	0	0.00	0.00	0.00	2.28	0.00	12.51
43	E7a_E8a	KnownJunction	0	0.00	0.00	6.89	3.32	0.00	0.00
44	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	6.42	0.00	0.00
45	E8_Aa	NovelBoundary	0	0.00	0.00	8.14	5.65	0.00	0.00
46	ER8a	ExonRegion	0	2.32	0.00	6.18	9.97	0.00	2.72
47	E8_Da	NovelBoundary	0	2.71	0.00	12.69	3.21	3.91	5.21
48	E8a_E9a	KnownJunction	0	3.74	0.00	7.06	0.00	0.00	0.00
49	I8_SR2	SilentIntronRegion	0	3.84	4.58	15.52	16.05	5.32	0.21
50	I8_AR2	ActiveIntronRegion	0	6.36	1.03	13.56	9.30	14.31	3.66
51	E9_Aa	NovelBoundary	0	0.00	5.40	3.53	3.15	0.00	0.00
52	ER9a	ExonRegion	0	3.85	0.37	4.41	13.56	1.97	0.00
53	E9_Da	NovelBoundary	0	0.00	0.00	5.98	5.71	0.00	0.00
54	E9a_E10a	KnownJunction	1	2.65	0.00	0.00	18.38	5.16	0.00
55	I9_SR1	SilentIntronRegion	0	1.33	0.00	5.15	6.77	2.59	0.00
56	E10_Aa	NovelBoundary	0	3.74	0.00	12.52	9.03	0.00	5.21
57	ER10a	ExonRegion	0	12.51	3.13	12.19	22.13	1.65	1.42
58	E10_Da	NovelBoundary	0	10.91	3.49	24.82	9.90	0.00	0.00
59	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	2.45	4.74	0.00
60	E10a_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	4.00	0.00
61	E10a_E12a	KnownJunction	1	3.07	0.00	8.42	30.83	0.00	0.00
62	E11_Aa	NovelBoundary	0	3.07	0.00	9.22	2.99	8.41	13.77
63	ER11a	ExonRegion	0	2.01	0.00	4.56	2.15	2.82	5.01
64	E11_Da	KnownBoundary	1	7.05	0.00	10.08	14.08	5.16	35.01
65	ER11b	ExonRegion	0	6.48	1.59	6.09	1.85	13.05	19.07
66	E11_Ab	KnownBoundary	0	26.39	9.06	12.87	3.37	50.44	14.10
67	ER11c	ExonRegion	0	9.07	4.56	6.82	2.05	17.74	5.27
68	E11_Db	NovelBoundary	1	0.00	0.00	3.53	3.32	39.62	4.20
69	E11_Dc	NovelBoundary	1	0.00	6.41	0.00	0.00	54.27	0.00
70	ER11d	ExonRegion	0	0.00	0.00	0.00	0.15	0.13	0.13
71	I11	Intron	0	4.03	1.52	4.14	1.58	151.21	118.96
72	I11_AR2	ActiveIntronRegion	0	5.34	2.02	5.07	2.09	199.97	157.59
73	E12_Aa	NovelBoundary	0	7.11	0.00	11.78	18.98	0.00	0.00
74	ER12a	ExonRegion	0	7.70	8.50	24.01	32.31	0.61	0.52
75	E12_Da	NovelBoundary	0	0.00	0.00	0.00	6.52	0.00	5.21
76	E12a_E13a	KnownJunction	0	10.48	16.87	19.24	15.50	3.75	0.00
77	ER13a	ExonRegion	0	7.89	8.03	19.82	20.03	3.12	1.40
78	E13a_E14a	KnownJunction	0	13.68	5.29	20.55	20.93	8.99	3.95
79	ER14a	ExonRegion	0	8.25	5.61	21.44	13.37	4.00	1.78
80	E14_Da	NovelBoundary	0	3.43	6.64	0.00	2.39	0.00	0.00
81	E14a_E15a	KnownJunction	0	12.47	3.37	28.35	2.28	15.07	8.31
82	E15_Aa	NovelBoundary	0	0.00	0.00	0.00	3.37	0.00	9.49
83	ER15a	ExonRegion	0	9.92	4.46	15.56	8.52	4.80	5.04
84	E15a_E16a	KnownJunction	0	10.12	0.00	18.27	2.39	4.91	5.12
85	ER16a	ExonRegion	0	7.52	5.81	9.88	5.29	5.68	1.08
86	E16a_E17a	KnownJunction	0	3.49	11.98	5.75	6.58	0.00	8.82
87	ER17a	ExonRegion	0	8.89	10.83	12.30	8.16	5.14	3.36
88	E17a_E18a	KnownJunction	0	9.46	21.37	10.93	11.64	0.00	4.28
89	ER18a	ExonRegion	0	8.62	7.77	21.95	13.91	10.85	3.43
90	E18a_E19a	KnownJunction	0	3.74	13.95	3.24	13.76	0.00	0.00
91	ER19a	ExonRegion	0	13.90	3.14	13.50	12.39	4.07	0.83
92	E19a_E20a	KnownJunction	0	6.45	5.79	5.92	7.72	0.00	0.00
93	ER20a	ExonRegion	0	9.90	11.07	7.47	6.52	2.85	0.73
94	E20_Da	NovelBoundary	0	0.00	0.00	0.00	2.50	20.64	3.53
95	E20a_E21a	KnownJunction	0	6.69	3.37	6.55	9.46	0.00	0.00
96	ER21a	ExonRegion	0	7.44	8.64	4.33	3.86	2.28	0.00
97	E21a_E22a	KnownJunction	0	9.16	5.96	2.45	4.89	8.32	0.00
98	E22_Aa	NovelBoundary	0	9.10	9.45	6.15	5.65	4.00	0.00
99	ER22a	ExonRegion	1	21.20	4.91	13.65	14.58	3.79	0.00
100	E22a_E23a	KnownJunction	1	22.42	0.00	38.14	23.05	8.57	0.00
101	ER23a	ExonRegion	0	23.43	11.84	24.47	23.28	4.51	0.00
102	E23_Da	NovelBoundary	0	3.68	5.40	0.00	0.00	0.00	0.00
103	E23a_E24a	KnownJunction	1	27.66	20.36	12.13	30.94	4.74	0.00
104	ER24a	ExonRegion	0	29.30	14.19	6.18	7.83	51.43	30.16