Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MLLT3	Gene	0	18.89	7.45	21.63	13.07	59.07	38.77
2	380338	Transcript	0	20.26	9.52	43.46	23.88	102.71	86.89
3	475957	Transcript	0	5.31	1.95	2.58	0.32	42.82	17.10
4	468513	Transcript	0	0.00	0.00	1.25	0.00	0.03	0.00
5	380323	Transcript	0	0.00	0.00	0.00	0.00	0.11	0.00
6	488705	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	380321	Transcript	0	0	0	0	0	0	0
8	491137	Transcript	0	0.00	0.00	0.45	0.46	0.00	0.00
9	355930	Transcript	0	0	0	0	0	0	0
10	429426	Transcript	0	0	0	0	0	0	0
11	469261	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1a	ExonRegion	0	2.98	0.00	2.72	0.12	0.85	0.45
13	E1_Ab	KnownBoundary	0	14.46	0.00	3.24	0.00	0.00	3.69
14	ER1b	ExonRegion	0	5.37	2.03	15.54	8.21	10.42	7.15
15	E1a_E2a	KnownJunction	0	13.02	3.49	17.99	11.26	9.32	13.60
16	ER2a	ExonRegion	0	22.08	8.08	40.22	29.79	56.89	33.71
17	E2a_E3a	KnownJunction	1	35.19	9.62	74.17	48.94	127.93	52.47
18	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
19	I2_SR1	SilentIntronRegion	0	0.72	0.32	10.16	4.21	0.03	0.08
20	I2_AR2	ActiveIntronRegion	0	0.00	0.00	10.14	9.84	0.00	0.95
21	I2_SR2	SilentIntronRegion	0	0.59	0.00	12.10	7.96	6.53	4.35
22	I2_AR3	ActiveIntronRegion	0	6.12	2.80	22.73	3.90	67.26	90.56
23	I2_AR5	ActiveIntronRegion	0	3.38	0.66	12.17	2.07	27.37	8.28
24	I2_SR5	SilentIntronRegion	0	5.05	2.38	10.28	3.52	1.20	0.96
25	I2_AR7	ActiveIntronRegion	0	0.43	1.27	10.79	2.91	10.33	14.71
26	I2_AR8	ActiveIntronRegion	0	0.61	0.37	5.01	1.60	29.29	28.35
27	I2_SR1	SilentIntronRegion	0	6.95	2.84	4.19	3.82	34.27	10.75
28	I2_AR1	ActiveIntronRegion	0	26.02	7.14	9.27	7.87	106.87	45.91
29	I2_SR2	SilentIntronRegion	0	8.97	4.60	3.10	0.00	3.36	3.24
30	I2_AR2	ActiveIntronRegion	1	10.83	2.60	6.62	2.25	16.81	32.38
31	I2_AR3	ActiveIntronRegion	0	0.65	0.00	1.34	1.33	16.10	7.96
32	I2_SR4	SilentIntronRegion	0	3.63	0.00	7.14	2.96	15.55	4.88
33	I2_AR6	ActiveIntronRegion	0	8.31	3.06	4.77	1.48	42.94	22.60
34	I2_AR7	ActiveIntronRegion	0	5.02	0.59	10.62	6.34	0.62	0.20
35	I2_AR8	ActiveIntronRegion	0	0.42	0.00	13.47	1.01	0.00	0.00
36	I2_AR11	ActiveIntronRegion	0	0.00	0.46	3.02	1.44	25.29	16.02
37	ER3a	ExonRegion	0	25.16	8.89	62.45	36.67	102.12	81.28
38	E3_Da	NovelBoundary	0	11.21	0.00	10.59	3.37	21.72	0.00
39	E3a_E4a	KnownJunction	0	25.25	24.75	71.04	28.27	277.34	303.84
40	I3_AR4	ActiveIntronRegion	0	0.00	0.00	0.46	0.91	26.83	14.18
41	E4_Aa	NovelBoundary	0	0.00	0.00	3.53	0.00	102.96	85.38
42	ER4a	ExonRegion	0	23.03	14.08	52.29	29.71	104.88	95.11
43	E4_Da	NovelBoundary	0	0.00	2.81	12.35	0.00	291.16	202.00
44	E4a_E5a	KnownJunction	0	19.58	5.96	31.37	18.05	77.99	61.79
45	ER5a	ExonRegion	0	24.24	10.55	65.95	48.61	144.73	113.35
46	E5a_E10a	KnownJunction	1	47.90	7.14	37.34	12.72	5.08	0.00
47	I5_AR1	ActiveIntronRegion	0	1.57	0.00	10.90	0.00	0.45	0.00
48	I5_AR2	ActiveIntronRegion	0	0.00	0.00	12.60	0.00	0.93	0.00
49	E6_Aa	NovelBoundary	0	3.74	0.00	24.82	2.94	0.00	0.00
50	ER6a	ExonRegion	0	0.00	0.00	3.37	0.00	0.00	0.00
51	E6_Da	NovelBoundary	0	3.74	0.00	12.81	12.18	0.00	0.00
52	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
53	ER7a	ExonRegion	0	0.00	0.00	1.62	0.00	0.12	0.00
54	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
55	I7_AR2	ActiveIntronRegion	0	0.00	0.00	9.28	0.00	0.00	0.00
56	I7_AR3	ActiveIntronRegion	0	1.31	0.00	18.07	2.45	0.00	0.00
57	E8_Aa	NovelBoundary	0	0.00	0.00	16.51	0.00	0.00	0.00
58	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.11	0.00
59	E8_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	4.08	0.00
60	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	1.81	0.00
61	ER8c	ExonRegion	0	0.00	0.00	0.00	0.00	1.81	0.00
62	ER8d	ExonRegion	0	0.00	0.15	0.00	0.00	1.43	0.00
63	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	E8a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
66	E9_Aa	NovelBoundary	0	0.00	0.00	25.62	2.83	0.00	0.00
67	ER9a	ExonRegion	0	0.00	0.00	1.36	1.37	0.00	0.00
68	E9_Da	NovelBoundary	0	0.00	0.00	10.99	2.28	0.00	0.00
69	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
70	E10_Aa	NovelBoundary	1	9.70	0.00	9.56	2.28	106.04	28.13
71	ER10a	ExonRegion	0	39.59	29.50	71.15	40.82	6.54	6.60
72	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	54.10	14.10
73	E10a_E11a	KnownJunction	0	45.73	21.54	33.24	22.02	9.57	19.23
74	E11_Ab	NovelBoundary	0	5.97	2.59	9.22	2.72	0.00	0.00
75	ER11a	ExonRegion	0	38.00	19.51	42.85	31.72	6.93	6.89
76	E11_Ac	KnownBoundary	0	27.90	13.56	39.16	36.10	14.57	5.12
77	ER11b	ExonRegion	0	29.11	16.95	39.79	30.05	8.75	6.53
78	ER11c	ExonRegion	0	17.82	13.56	34.18	31.62	22.61	8.92
79	E11_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	11.65	5.21
80	E11a_E12a	KnownJunction	0	18.92	7.59	24.59	14.19	16.98	13.85
81	ER11d	ExonRegion	0	10.61	3.89	5.15	0.64	85.64	34.20
82	E11_Db	NovelBoundary	0	13.68	6.47	0.00	0.00	0.00	0.00
83	ER12a	ExonRegion	0	18.36	23.53	65.42	52.21	15.15	5.60
84	E12b_E13a	KnownJunction	0	25.01	8.16	44.34	11.64	17.15	29.97
85	E12b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
86	ER12b	ExonRegion	0	22.07	11.33	43.65	28.01	17.59	13.30
87	E13_Aa	NovelBoundary	0	0.00	0.00	9.51	3.37	0.00	0.00
88	ER13a	ExonRegion	0	20.91	13.48	40.34	33.06	12.33	10.16
89	E13a_E14a	KnownJunction	0	23.86	15.58	17.82	27.02	14.73	5.21
90	E13a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
91	ER14a	ExonRegion	0	26.63	6.72	30.38	16.87	23.23	9.67
92	E14a_E15a	KnownJunction	0	16.21	14.01	24.76	9.46	68.67	32.83
93	ER15a	ExonRegion	1	25.50	9.32	35.98	6.48	42.53	26.84
94	E15_Da	KnownBoundary	1	33.56	3.15	47.76	8.65	72.75	66.75
95	ER15b	ExonRegion	1	15.35	5.56	33.94	6.58	28.93	16.61
96	E15_Db	KnownBoundary	0	3.43	6.41	30.51	9.19	28.30	18.89
97	ER15c	ExonRegion	0	7.13	2.31	20.74	5.69	29.92	27.87
98	E15_Dc	KnownBoundary	1	20.85	0.00	39.68	10.06	118.53	120.65
99	ER15d	ExonRegion	1	21.36	4.02	54.42	12.53	80.76	55.41
100	E15_Dd	KnownBoundary	1	33.08	8.27	65.41	8.05	164.72	78.42
101	ER15e	ExonRegion	0	51.40	19.40	26.74	15.91	127.28	97.86
102	E15_De	KnownBoundary	1	16.81	3.37	9.68	7.99	94.31	18.30
103	ER15f	ExonRegion	0	10.64	3.38	10.16	5.41	27.89	13.30