Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	C9orf93	Gene	0	3.76	2.98	12.43	10.49	4.14	7.89
2	297641	Transcript	0	0.00	0.00	3.53	0.00	0.00	0.00
3	380689	Transcript	0	3.11	1.59	10.24	5.21	0.00	5.86
4	380701	Transcript	0	7.73	3.21	7.06	3.74	9.94	6.06
5	474193	Transcript	0	0.26	0.26	0.81	0.81	0.00	6.41
6	359391	Transcript	0	0.00	0.46	1.21	0.84	0.00	0.21
7	449575	Transcript	0	1.30	0.06	3.66	1.11	0.10	2.12
8	432954	Transcript	0	0.75	1.50	2.88	2.08	5.67	7.86
9	470191	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	498725	Transcript	0	0.00	0.00	0.85	0.95	0.00	0.00
11	430161	Transcript	0	0.00	0.00	0.48	0.00	0.00	0.00
12	486641	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
13	472806	Transcript	0	4.09	1.12	1.40	3.94	4.96	0.36
14	478913	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1a	ExonRegion	0	2.82	0.00	4.45	1.18	0.00	3.15
16	E1_Ab	KnownBoundary	0	10.42	0.00	8.65	11.69	0.00	0.00
17	ER1b	ExonRegion	0	2.46	2.17	12.54	9.09	0.00	8.62
18	E1a_E2a	KnownJunction	0	6.93	6.81	25.45	23.76	0.00	29.55
19	ER1c	ExonRegion	0	5.95	4.16	15.80	27.81	0.00	17.00
20	ER1d	ExonRegion	0	0.53	0.52	1.63	1.62	0.00	2.50
21	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	10.33
22	E2_Aa	NovelBoundary	0	2.95	6.97	3.53	3.37	0.00	0.00
23	ER2a	ExonRegion	0	4.49	5.53	23.25	40.38	0.96	32.42
24	E2_Da	KnownBoundary	0	3.37	6.36	35.29	49.15	4.66	73.38
25	ER2b	ExonRegion	0	4.83	10.86	35.86	30.16	4.15	90.45
26	E2b_E3a	KnownJunction	0	3.74	6.24	44.91	27.30	8.32	57.17
27	ER3a	ExonRegion	0	6.21	8.65	37.65	38.87	4.12	40.22
28	E3a_E4a	KnownJunction	0	5.30	16.09	54.76	30.72	5.16	56.42
29	ER4a	ExonRegion	0	6.74	12.56	32.23	38.17	2.58	19.97
30	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	E4a_E6a	KnownJunction	0	2.83	15.47	42.86	35.29	4.33	68.51
32	E5_Aa	NovelBoundary	0	503.44	172.05	994.55	462.82	601.13	423.14
33	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
34	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	ER6a	ExonRegion	0	11.99	14.06	35.25	38.91	6.57	34.00
36	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	31.46	0.00
37	E6a_E7a	KnownJunction	0	19.58	2.81	21.97	21.26	0.00	35.60
38	ER7a	ExonRegion	0	12.99	15.39	20.11	12.47	0.00	23.81
39	E7a_E8a	KnownJunction	0	0.00	3.21	18.73	5.98	0.00	29.38
40	ER8a	ExonRegion	0	7.43	5.67	23.03	18.48	0.00	5.81
41	E8a_E9a	KnownJunction	0	2.77	5.62	23.40	19.36	0.00	7.14
42	ER9a	ExonRegion	0	1.20	5.94	14.20	9.29	0.00	5.45
43	E9a_E10a	KnownJunction	0	3.74	0.00	3.13	6.58	0.00	23.93
44	ER10a	ExonRegion	0	0.50	2.94	24.86	22.61	0.00	17.60
45	E10a_E11a	KnownJunction	0	0.00	0.00	21.52	31.16	0.00	51.13
46	ER11a	ExonRegion	0	0.00	1.14	25.13	32.48	0.99	16.51
47	E11_Da	NovelBoundary	0	0.00	0.00	0.00	6.63	0.00	0.00
48	E11a_E12a	KnownJunction	0	0.00	0.00	34.27	20.61	0.00	35.26
49	ER12a	ExonRegion	0	3.12	1.53	30.35	24.99	1.19	16.79
50	E12a_E13a	KnownJunction	0	0.00	0.00	23.62	24.47	0.00	56.67
51	ER13a	ExonRegion	0	3.02	8.23	17.18	16.15	0.14	20.00
52	E13a_E14a	KnownJunction	0	10.06	5.29	22.88	13.48	0.00	8.56
53	E13a_E14b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
54	E14_Ab	NovelBoundary	0	0.00	0.00	36.55	5.33	0.00	51.63
55	ER14a	ExonRegion	0	5.49	2.66	28.33	12.58	0.00	20.73
56	ER14b	ExonRegion	0	0.32	0.83	25.77	14.98	0.00	15.95
57	E14a_E15b	KnownJunction	0	0.00	0.00	14.97	14.52	0.00	8.65
58	ER15a	ExonRegion	0	0.00	0.92	2.41	1.68	0.00	0.41
59	ER15b	ExonRegion	0	0.80	4.55	22.59	17.52	0.00	4.75
60	E15a_E16a	KnownJunction	0	0.00	0.00	25.22	9.30	0.00	12.93
61	ER16a	ExonRegion	0	0.96	4.46	30.84	22.77	0.00	9.60
62	E16a_E17a	KnownJunction	0	0.00	6.97	18.90	28.60	0.00	40.63
63	ER17a	ExonRegion	0	1.07	2.86	25.00	24.96	0.73	21.24
64	E17a_E18a	KnownJunction	0	3.07	8.10	19.87	10.77	0.00	42.48
65	E18_Aa	NovelBoundary	0	9.76	0.00	3.47	3.37	0.00	0.00
66	ER18a	ExonRegion	0	2.49	4.88	26.80	14.72	0.00	2.65
67	E18_Ab	KnownBoundary	0	3.01	5.62	20.27	19.36	0.00	5.21
68	ER18b	ExonRegion	0	5.36	0.89	20.65	16.72	0.00	2.23
69	E18a_E19a	KnownJunction	0	7.47	0.00	17.59	23.71	0.00	4.03
70	ER19a	ExonRegion	0	2.36	1.28	34.00	23.88	0.00	3.80
71	E19a_E20a	KnownJunction	0	3.25	0.00	45.77	35.18	0.00	4.20
72	ER20a	ExonRegion	0	2.19	4.43	42.65	28.37	2.38	2.03
73	E20_Ab	KnownBoundary	0	0.00	8.21	39.68	43.12	0.00	4.87
74	ER20b	ExonRegion	0	6.19	10.32	32.55	44.72	1.43	1.53
75	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
76	ER21a	ExonRegion	0	9.10	10.42	60.62	82.13	2.11	0.77
77	E21a_E22a	KnownJunction	0	16.63	14.96	10.08	13.59	8.66	0.00
78	ER22a	ExonRegion	0	9.91	9.34	63.73	62.31	3.82	0.00
79	E22a_E24a	KnownJunction	0	9.28	3.43	7.00	10.11	12.82	0.00
80	ER23a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
81	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
82	E24_Aa	NovelBoundary	0	0.00	0.00	4.90	8.43	0.00	0.00
83	ER24a	ExonRegion	0	6.06	3.67	12.17	10.58	8.28	0.98
84	E24a_E25a	KnownJunction	0	10.18	0.00	13.43	17.73	12.90	0.00
85	ER25a	ExonRegion	0	7.45	0.00	9.84	9.64	9.86	3.87
86	E25a_E29a	KnownJunction	0	7.47	0.00	6.83	0.00	26.14	13.60
87	E26_Aa	NovelBoundary	0	0.00	0.00	0.00	6.04	0.00	0.00
88	ER26a	ExonRegion	0	0.00	0.00	1.69	1.90	0.00	0.00
89	E26a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
90	ER27a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
91	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
92	E29_Ab	NovelBoundary	0	2.53	0.00	0.00	3.37	15.65	8.23
93	ER29a	ExonRegion	0	6.33	0.00	7.39	1.29	10.85	7.03
94	ER29b	ExonRegion	0	9.99	5.69	7.67	4.04	12.36	5.60
95	E29_Da	KnownBoundary	0	0.00	5.85	0.00	0.00	9.82	5.04
96	E29a_E30a	KnownJunction	0	0.00	0.00	3.53	0.00	0.00	0.00
97	E29a_E35a	KnownJunction	0	7.47	0.00	5.35	0.00	35.04	0.00
98	E29_Db	KnownBoundary	0	3.62	0.00	3.30	0.00	17.73	4.37
99	E29b_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
100	ER29c	ExonRegion	0	2.11	4.16	2.17	0.72	11.75	3.70
101	ER29d	ExonRegion	0	0.75	1.50	2.88	2.08	5.67	7.86
102	E29_Dc	NovelBoundary	0	0.00	0.00	7.00	0.00	0.00	10.16
103	E30_Aa	NovelBoundary	0	11.21	0.00	7.06	3.37	5.16	10.33
104	ER30a	ExonRegion	0	3.64	0.00	1.09	0.00	0.00	0.00
105	E30_Da	NovelBoundary	0	10.00	0.00	3.53	3.37	0.00	0.00
106	E30b_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
107	ER30b	ExonRegion	0	5.50	0.00	0.00	0.00	0.00	0.00
108	ER31a	ExonRegion	0	0.00	0.00	1.85	0.00	0.00	0.00
109	E31a_E32a	KnownJunction	0	0.00	0.00	6.94	0.00	0.00	0.00
110	E32_Aa	NovelBoundary	0	0.00	0.00	9.56	3.15	0.00	0.00
111	ER32a	ExonRegion	0	1.01	0.28	9.49	5.57	0.49	10.59
112	ER33a	ExonRegion	0	5.85	1.05	5.62	4.23	2.80	1.44
113	E33a_E34a	KnownJunction	0	3.43	0.00	0.00	6.69	0.00	0.00
114	E34_Aa	NovelBoundary	0	15.00	12.37	11.04	5.55	12.90	11.42
115	ER34a	ExonRegion	0	7.06	0.44	0.00	2.24	3.57	0.00
116	E34_Da	NovelBoundary	0	13.44	6.75	9.34	2.23	13.65	13.27
117	E34a_E35a	KnownJunction	0	0.00	2.98	0.00	2.61	13.48	0.00
118	ER35a	ExonRegion	0	8.38	7.80	12.90	10.01	17.00	7.09
119	E35_Da	KnownBoundary	0	12.77	5.23	23.17	18.32	16.56	28.96
120	ER35b	ExonRegion	0	8.95	6.87	21.11	11.68	13.56	13.67
121	E35b_E36a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
122	E35b_E37a	KnownJunction	0	16.87	6.02	15.37	9.13	32.55	17.80
123	ER36a	ExonRegion	0	0.00	0.00	1.79	0.00	0.00	0.00
124	E36_Da	NovelBoundary	0	0.00	0.00	5.98	5.55	0.00	0.00
125	E36a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
126	E36a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
127	ER36b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
128	ER37a	ExonRegion	0	9.28	4.40	17.38	14.91	23.02	20.19
129	E37_Da	KnownBoundary	0	6.21	8.16	35.01	23.71	33.46	58.18
130	ER37b	ExonRegion	0	6.20	3.51	7.34	9.12	13.57	16.17
131	E37_Db	KnownBoundary	0	3.19	5.29	8.48	6.85	0.00	4.20
132	ER37c	ExonRegion	0	7.73	3.21	7.06	3.74	9.94	6.06
133	E37_Dc	NovelBoundary	0	0.00	0.00	0.00	8.65	0.00	0.00
134	I37_AR3	ActiveIntronRegion	0	8.52	0.00	4.42	0.96	6.23	9.05
135	ER38a	ExonRegion	0	0.00	0.00	2.40	0.00	0.00	0.00
136	E38a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
137	ER39a	ExonRegion	0	0.86	0.00	0.00	1.29	0.00	0.00
138	E39a_E40a	KnownJunction	0	3.56	0.00	0.00	0.00	0.00	0.00
139	ER40a	ExonRegion	0	2.48	0.00	0.00	0.00	0.00	0.00
140	E40a_E41a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
141	ER41a	ExonRegion	0	0.64	0.00	0.00	0.00	0.00	0.00
142	E41a_E42a	KnownJunction	0	3.13	0.00	0.00	0.00	0.00	0.00
143	ER42a	ExonRegion	0	1.39	2.77	0.00	0.00	0.14	0.00
144	E42a_E43a	KnownJunction	0	3.07	0.00	0.00	0.00	0.00	0.00
145	ER43a	ExonRegion	0	3.13	0.00	1.42	0.00	1.36	0.00
146	E43_Da	KnownBoundary	0	0.00	0.00	5.81	0.00	0.00	0.00
147	E43a_E44a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
148	ER43b	ExonRegion	0	0.00	0.00	4.03	0.00	1.06	0.00
149	E43b_E44a	KnownJunction	0	0.00	0.00	3.53	0.00	4.25	0.00
150	E44_Aa	NovelBoundary	0	3.74	0.00	0.00	3.21	9.07	0.00
151	ER44a	ExonRegion	0	1.43	2.34	3.28	1.21	2.81	0.42
152	E44_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	18.23	0.00
153	ER44b	ExonRegion	0	0.00	0.00	0.00	0.00	8.03	1.24
154	ER44c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00