Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	RFX3	Gene	0	11.89	3.58	34.42	12.77	68.72	25.56
2	449190	Transcript	0	0.00	1.04	1.19	2.96	2.08	0.00
3	381985	Transcript	0	0	0	0	0	0	0
4	381986	Transcript	0	0	0	0	0	0	0
5	302303	Transcript	0	0	0	0	0	0	0
6	381992	Transcript	0	0	0	0	0	0	0
7	382004	Transcript	0	18.09	4.13	36.76	13.09	115.84	43.30
8	397849	Transcript	0	16.87	9.79	45.54	27.57	0.00	0.00
9	451859	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	457373	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
11	358730	Transcript	0	0	0	0	0	0	0
12	381984	Transcript	0	0.00	0.00	6.33	0.00	6.38	0.00
13	420720	Transcript	0	0	0	0	0	0	0
14	442560	Transcript	0	0.00	0.00	1.37	0.00	0.00	0.00
15	458034	Transcript	0	0.02	0.06	4.90	0.87	0.03	0.01
16	449234	Transcript	0	0	0	0	0	0	0
17	ER1a	ExonRegion	0	0.00	2.08	2.37	2.55	0.00	0.00
18	ER1b	ExonRegion	0	5.32	8.60	12.87	16.16	0.00	0.76
19	E1_Ac	KnownBoundary	0	6.99	27.50	20.38	28.76	0.00	0.00
20	ER1c	ExonRegion	0	10.15	14.02	31.33	26.35	0.00	0.00
21	E1a_E2a	KnownJunction	0	3.74	0.00	3.30	3.32	0.00	0.00
22	E1a_E5a	KnownJunction	0	16.87	9.79	45.54	27.57	0.00	0.00
23	I1	Intron	0	1.25	0.46	10.51	4.29	1.34	2.43
24	I1_SR3	SilentIntronRegion	0	0.51	0.50	18.22	3.88	0.00	0.00
25	I1_SR4	SilentIntronRegion	0	4.88	3.86	5.02	5.66	10.96	7.88
26	I1_SR5	SilentIntronRegion	0	0.63	0.29	10.21	4.05	1.83	1.36
27	I1_AR5	ActiveIntronRegion	0	0.80	0.00	13.34	2.19	0.00	0.47
28	I1_SR6	SilentIntronRegion	0	1.57	0.70	11.46	4.36	1.61	3.79
29	I1_AR6	ActiveIntronRegion	0	0.40	0.38	13.69	7.00	1.33	0.10
30	I1_SR7	SilentIntronRegion	0	1.76	0.29	10.52	3.86	0.00	3.79
31	I1_AR7	ActiveIntronRegion	0	0.00	0.00	8.60	6.94	0.66	4.40
32	I1_SR9	SilentIntronRegion	0	0.00	0.37	9.68	4.29	0.06	0.34
33	I1_AR9	ActiveIntronRegion	0	0.00	2.92	25.51	10.80	0.54	0.80
34	I1_SR10	SilentIntronRegion	0	1.28	0.00	12.90	4.68	2.89	5.10
35	I1_AR10	ActiveIntronRegion	1	3.34	0.00	18.33	8.98	12.65	47.12
36	I1_SR11	SilentIntronRegion	0	1.84	0.33	9.10	4.28	1.48	1.84
37	I1_AR11	ActiveIntronRegion	0	0.00	0.00	19.05	7.50	0.00	3.17
38	I1_AR12	ActiveIntronRegion	0	0.00	0.00	23.78	7.31	1.45	6.08
39	I1_AR13	ActiveIntronRegion	1	0.57	0.00	10.89	3.52	0.31	12.20
40	I1_SR12	SilentIntronRegion	0	0.30	0.29	22.17	5.59	0.25	0.26
41	I1_AR14	ActiveIntronRegion	0	0.00	0.00	8.90	4.56	0.00	0.00
42	I1_SR13	SilentIntronRegion	0	0.34	1.98	10.54	4.14	0.00	0.00
43	I1_AR15	ActiveIntronRegion	0	0.00	0.00	11.21	4.66	0.00	0.00
44	I1_AR16	ActiveIntronRegion	0	0.00	0.00	13.04	0.00	0.00	0.00
45	I1_SR14	SilentIntronRegion	0	2.29	0.72	8.96	5.23	0.67	0.20
46	ER2a	ExonRegion	0	1.13	0.00	4.12	2.35	0.00	0.00
47	E2_Da	NovelBoundary	0	3.56	0.00	8.99	10.06	0.00	0.00
48	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	3.37	4.16	0.00
49	E2a_E5a	KnownJunction	0	0.00	0.00	3.47	0.00	0.00	0.00
50	I2	Intron	0	0.40	0.39	11.33	4.91	0.00	0.00
51	I2_SR1	SilentIntronRegion	0	0.43	0.43	11.99	5.20	0.00	0.00
52	E3_Aa	NovelBoundary	0	0.00	0.00	17.65	6.04	0.00	0.00
53	E3_Ab	NovelBoundary	0	3.56	0.00	15.88	6.58	0.00	0.00
54	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
55	ER3b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
56	E3_Da	NovelBoundary	0	0.00	0.00	9.11	5.93	0.00	0.00
57	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
58	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
59	ER4a	ExonRegion	0	0.00	0.00	4.35	2.15	0.00	0.00
60	ER4b	ExonRegion	0	1.38	0.00	5.15	4.12	1.18	0.00
61	E4_Da	NovelBoundary	0	0.00	0.00	13.78	3.37	0.00	0.00
62	E4a_E5a	KnownJunction	0	0.00	0.00	3.36	3.37	0.00	0.00
63	I4	Intron	0	1.87	0.39	10.95	3.55	0.34	0.56
64	I4_SR1	SilentIntronRegion	0	2.70	0.69	12.25	3.23	0.40	0.77
65	I4_SR2	SilentIntronRegion	0	1.81	0.00	17.50	8.29	0.00	0.00
66	I4_AR2	ActiveIntronRegion	0	1.16	0.00	9.48	4.50	0.00	0.00
67	I4_SR1	SilentIntronRegion	0	1.22	0.40	7.92	4.13	12.47	7.57
68	I4_AR3	ActiveIntronRegion	0	13.59	8.23	5.92	0.53	51.46	22.91
69	Ix	Intron	0	1.23	0.35	14.25	4.71	0.74	0.38
70	Ix_AR3	ActiveIntronRegion	0	2.11	0.00	16.93	0.00	0.00	0.00
71	Ix_AR2	ActiveIntronRegion	0	1.65	0.05	17.35	6.44	0.00	0.00
72	Ix_SR1	SilentIntronRegion	0	1.13	0.72	10.86	3.60	0.50	0.05
73	Ix_AR1	ActiveIntronRegion	0	0.22	0.00	22.08	5.89	4.84	3.41
74	Ix_AR4	ActiveIntronRegion	0	1.02	0.33	0.77	1.73	78.22	34.35
75	Ix	Intron	0	0.79	0.00	12.20	7.26	0.00	0.00
76	Ix_SR1	SilentIntronRegion	0	0.79	0.00	12.26	7.29	0.00	0.00
77	Ix	Intron	0	3.20	0.23	5.18	3.04	15.88	3.41
78	Ix_SR1	SilentIntronRegion	0	3.20	0.23	5.18	3.04	15.88	3.41
79	I4_AR1	ActiveIntronRegion	0	6.70	1.74	5.08	1.80	180.29	100.18
80	I4_AR2	ActiveIntronRegion	0	0.92	0.00	9.31	1.92	3.68	2.09
81	ER5a	ExonRegion	0	10.56	6.23	39.11	22.02	0.00	0.00
82	ER5b	ExonRegion	0	8.65	0.97	18.47	16.01	0.00	0.00
83	E5_Da	NovelBoundary	0	0.00	3.26	0.00	5.98	0.00	0.00
84	E5a_E6a	KnownJunction	0	7.17	0.00	17.65	25.34	0.00	0.00
85	ER6a	ExonRegion	0	9.82	1.14	51.74	22.55	0.04	0.00
86	E6_Da	NovelBoundary	0	0.00	6.97	7.06	6.74	0.00	0.00
87	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
88	E6a_E8a	KnownJunction	0	5.48	11.25	66.26	19.08	0.00	0.00
89	ER7a	ExonRegion	0	0.00	0.00	3.59	0.00	3.36	0.00
90	E7_Da	KnownBoundary	0	0.00	0.00	7.06	0.00	9.07	0.00
91	ER7b	ExonRegion	0	0.00	0.00	6.33	0.00	6.38	0.00
92	I7_AR2	ActiveIntronRegion	0	0.43	0.86	6.26	2.22	129.58	31.65
93	E8_Aa	NovelBoundary	0	3.74	0.00	10.02	9.08	0.00	0.00
94	ER8a	ExonRegion	0	7.37	2.83	77.13	27.94	0.00	0.00
95	E8_Da	KnownBoundary	0	9.94	3.09	183.53	40.18	0.00	0.00
96	ER8b	ExonRegion	0	4.37	4.58	117.62	30.90	0.00	0.00
97	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
98	E8b_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
99	E8b_E10a	KnownJunction	0	3.74	6.97	51.86	17.34	0.00	0.00
100	E8b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
101	E9_Aa	NovelBoundary	0	3.56	0.00	3.07	12.83	0.00	0.00
102	ER9a	ExonRegion	0	0.00	0.00	2.73	0.00	0.00	0.00
103	E9_Ab	KnownBoundary	0	0.00	0.00	15.83	0.00	0.00	0.00
104	ER9b	ExonRegion	0	1.42	0.00	6.31	0.00	0.00	0.00
105	ER9c	ExonRegion	0	0.00	0.00	0.83	0.00	0.00	0.00
106	I9_AR1	ActiveIntronRegion	0	0.47	0.00	8.18	0.48	3.20	7.38
107	ER10a	ExonRegion	0	2.67	6.32	45.80	26.91	1.04	0.00
108	E10a_E11a	KnownJunction	0	2.89	0.00	51.52	28.17	4.58	0.00
109	ER10b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
110	ER11a	ExonRegion	0	8.23	4.12	66.60	24.19	4.05	0.00
111	E11_Da	NovelBoundary	0	0.00	0.00	0.00	5.49	0.00	0.00
112	E11b_E12a	KnownJunction	0	2.59	6.47	76.62	26.43	8.49	0.00
113	ER11b	ExonRegion	0	2.11	4.16	65.80	24.62	7.23	0.00
114	E12_Aa	NovelBoundary	0	0.00	0.00	14.06	0.00	0.00	0.00
115	ER12a	ExonRegion	0	4.64	4.36	55.34	20.73	3.96	0.17
116	E12a_E13a	KnownJunction	1	5.78	5.12	65.07	9.19	4.83	3.53
117	ER13a	ExonRegion	0	6.82	3.51	68.79	14.32	2.67	0.99
118	E13a_E14a	KnownJunction	0	6.03	0.00	58.52	18.16	13.48	0.00
119	ER14a	ExonRegion	0	5.01	0.39	49.58	21.50	1.31	1.25
120	E14a_E15a	KnownJunction	0	7.47	0.00	40.08	6.74	0.00	0.00
121	ER15a	ExonRegion	0	4.30	8.56	78.90	24.11	5.66	1.02
122	E15a_E16b	KnownJunction	0	6.03	4.72	55.62	18.00	18.06	3.61
123	ER16a	ExonRegion	0	0.02	0.06	4.90	0.87	0.03	0.01
124	E16_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
125	ER16b	ExonRegion	0	1.70	14.35	55.86	20.94	7.06	1.85
126	E16a_E17a	KnownJunction	0	2.83	9.06	67.46	37.14	17.40	4.87
127	ER17a	ExonRegion	0	0.34	5.83	59.32	20.99	4.72	3.61
128	E17a_E18a	KnownJunction	0	0.00	18.45	58.12	19.52	9.49	18.81
129	E18_Aa	NovelBoundary	0	0.00	0.00	14.00	0.00	0.00	0.00
130	ER18a	ExonRegion	0	2.17	6.41	33.79	22.89	11.66	4.10
131	E18a_E19a	KnownJunction	1	7.47	6.97	61.08	25.45	46.45	4.11
132	E19_Aa	NovelBoundary	0	0.00	9.00	0.00	0.00	26.55	0.00
133	ER19a	ExonRegion	0	5.33	8.61	48.76	21.59	42.35	8.70
134	E19_Da	NovelBoundary	0	3.74	4.72	26.64	13.70	22.39	5.12
135	E19_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	79.16	20.07
136	E19b_E20a	KnownJunction	0	3.01	3.43	56.13	27.73	4.08	0.00
137	ER19b	ExonRegion	0	2.11	6.99	46.81	21.54	4.60	0.00
138	I19_AR1	ActiveIntronRegion	0	0.79	0.00	1.68	2.15	25.63	7.31
139	I19_SR1	SilentIntronRegion	0	1.94	1.05	6.70	2.94	20.21	4.48
140	E20_Aa	NovelBoundary	0	0.00	0.00	13.61	0.00	0.00	0.00
141	ER20a	ExonRegion	0	4.69	1.42	33.31	12.76	2.25	1.78
142	E20_Da	KnownBoundary	0	2.95	2.81	12.81	6.36	4.08	0.00
143	E20a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
144	E20a_E21a	KnownJunction	1	0.00	0.00	24.48	0.00	0.00	0.00
145	ER20b	ExonRegion	0	2.39	0.82	9.08	4.01	4.41	0.57
146	E20_Ab	KnownBoundary	0	2.53	0.00	2.39	0.00	8.99	0.00
147	ER20c	ExonRegion	0	4.03	2.08	4.74	0.00	3.62	0.00
148	ER20d	ExonRegion	0	1.73	0.50	18.53	3.11	4.25	1.54
149	E20_Dc	KnownBoundary	0	0.00	0.00	25.16	9.19	0.00	3.78
150	ER20e	ExonRegion	0	0.68	0.00	12.98	2.44	0.56	3.30
151	I20	Intron	0	2.10	0.77	11.03	4.11	8.05	4.93
152	I20_SR1	SilentIntronRegion	0	0.58	0.16	9.35	3.50	0.00	0.00
153	I20_AR1	ActiveIntronRegion	0	1.36	1.93	23.44	4.91	0.67	0.00
154	I20_SR2	SilentIntronRegion	0	4.22	0.52	9.43	1.84	8.16	3.61
155	I20_AR2	ActiveIntronRegion	0	0.35	0.00	4.19	3.83	5.62	7.32
156	I20_AR3	ActiveIntronRegion	0	2.11	0.00	17.38	2.37	13.02	6.94
157	I20_SR3	SilentIntronRegion	0	1.40	0.00	18.16	4.66	10.57	1.71
158	I20_AR4	ActiveIntronRegion	0	1.19	1.64	14.65	4.12	123.18	72.43
159	I20_SR4	SilentIntronRegion	0	3.75	0.66	15.63	6.57	0.18	0.99
160	E21_Aa	NovelBoundary	0	0.00	0.00	9.34	6.42	0.00	0.00
161	ER21a	ExonRegion	0	0.00	0.00	30.16	9.97	1.18	0.17
162	E21a_E22a	KnownJunction	0	0.00	0.00	45.77	18.49	4.91	0.00
163	ER22a	ExonRegion	0	4.30	0.75	22.44	10.16	7.31	1.76
164	E22_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
165	ER22b	ExonRegion	0	18.09	4.13	36.76	13.09	115.84	43.30