Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	TUSC3	Gene	0	68.69	15.64	48.09	20.11	143.34	39.72
2	382030	Transcript	0	0.00	0.00	0.00	0.00	0.34	0.00
3	382020	Transcript	0	66.38	25.23	30.27	8.17	255.36	67.60
4	351598	Transcript	1	63.86	4.47	21.93	6.14	101.61	45.29
5	359666	Transcript	0	0	0	0	0	0	0
6	398166	Transcript	0	0.90	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	0.00	0.00	1.38	0.00	0.00	0.00
9	E1_Ac	KnownBoundary	0	3.43	0.00	0.00	0.00	0.00	0.00
10	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1c	ExonRegion	0	0.00	0.00	3.10	0.00	0.00	0.00
12	ER1d	ExonRegion	1	3.35	4.46	12.25	0.27	1.51	0.00
13	E1_Ae	KnownBoundary	0	0.00	8.72	20.04	2.50	4.91	0.00
14	ER1e	ExonRegion	0	18.32	8.30	56.10	18.82	29.54	4.18
15	E1a_E2a	KnownJunction	0	38.74	9.34	58.41	23.87	48.11	30.98
16	I1_AR2	ActiveIntronRegion	0	0.00	2.08	12.41	0.31	13.43	1.85
17	ER2a	ExonRegion	0	44.76	15.70	98.08	58.57	63.27	14.92
18	E2a_E3a	KnownJunction	0	47.96	21.77	61.65	57.58	78.32	13.27
19	ER3a	ExonRegion	1	57.86	15.42	83.73	44.49	83.78	8.57
20	E3a_E4a	KnownJunction	1	93.76	19.24	90.45	70.74	233.73	14.61
21	ER4a	ExonRegion	1	81.89	13.50	108.47	54.42	121.82	11.97
22	E4a_E5a	KnownJunction	1	89.66	0.00	115.50	58.99	209.17	46.93
23	ER5a	ExonRegion	1	100.51	9.33	88.53	43.65	124.12	16.48
24	E5a_E6a	KnownJunction	0	154.86	31.10	149.66	47.14	148.74	42.31
25	ER6a	ExonRegion	0	164.82	31.28	106.11	58.14	138.47	26.02
26	E6_Da	NovelBoundary	0	0.00	0.00	24.93	5.76	0.00	0.00
27	E6a_E7a	KnownJunction	0	198.72	33.69	57.27	30.83	297.73	74.30
28	ER7a	ExonRegion	0	183.49	41.97	96.57	32.15	145.32	30.00
29	E7a_E8a	KnownJunction	1	257.35	67.89	120.11	32.84	319.46	54.07
30	ER8a	ExonRegion	0	208.71	41.25	88.03	48.92	233.09	42.18
31	E8a_E9a	KnownJunction	1	235.72	26.10	47.87	20.55	453.13	112.25
32	I8	Intron	0	0.55	0.29	11.17	4.10	0.68	0.61
33	I8_SR1	SilentIntronRegion	0	0.76	0.75	17.63	6.82	0.00	0.00
34	I8_SR2	SilentIntronRegion	0	0.32	0.43	12.94	5.51	0.65	0.85
35	ER9a	ExonRegion	0	213.71	61.55	91.63	41.71	427.10	90.38
36	E9a_E12a	KnownJunction	1	128.89	15.75	52.37	21.26	134.92	18.39
37	E9a_E13a	KnownJunction	0	97.49	43.70	36.55	8.48	425.58	109.06
38	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.68	0.00
39	I10	Intron	0	0.42	0.00	13.71	14.86	0.00	0.00
40	I10_AR1	ActiveIntronRegion	0	0.00	0.00	22.66	25.68	0.00	0.00
41	I10_SR1	SilentIntronRegion	0	0.50	0.00	12.04	12.82	0.00	0.00
42	ER11a	ExonRegion	0	0.90	0.00	0.00	0.00	0.00	0.00
43	I11_AR1	ActiveIntronRegion	0	2.34	3.95	15.18	2.15	0.00	0.00
44	I11_AR2	ActiveIntronRegion	0	1.20	1.17	29.56	11.94	0.00	0.00
45	I11_AR3	ActiveIntronRegion	0	0.00	4.81	10.62	6.63	0.00	0.00
46	I11_AR4	ActiveIntronRegion	1	0.00	5.40	2.24	8.55	0.00	0.00
47	I11_AR5	ActiveIntronRegion	0	0.00	0.00	8.43	7.27	0.00	0.00
48	ER12a	ExonRegion	0	89.34	13.67	37.28	20.98	78.41	11.40
49	ER12b	ExonRegion	0	69.21	8.93	19.90	12.28	54.57	13.18
50	E12_Db	NovelBoundary	0	3.68	0.00	8.71	17.83	4.91	0.00
51	E12b_E13a	KnownJunction	1	58.51	0.00	23.97	0.00	148.66	77.41
52	I12	Intron	0	6.81	1.38	24.55	10.07	12.28	5.59
53	I12_SR1	SilentIntronRegion	0	0.00	0.00	7.66	5.51	0.90	0.00
54	I12_AR2	ActiveIntronRegion	0	10.35	0.00	26.42	14.05	27.40	7.38
55	I12_SR2	SilentIntronRegion	0	2.46	1.96	33.09	14.30	5.86	4.19
56	I12_AR3	ActiveIntronRegion	0	5.46	2.23	31.21	11.20	12.47	15.84
57	I12_SR3	SilentIntronRegion	0	1.29	0.00	29.99	8.84	0.00	0.80
58	I12_AR4	ActiveIntronRegion	0	8.64	1.14	19.69	8.46	13.46	1.77
59	E13_Aa	NovelBoundary	0	63.63	16.42	15.48	5.55	252.20	45.50
60	ER13a	ExonRegion	0	257.63	70.55	117.63	40.59	758.24	242.33
61	E13_Da	KnownBoundary	0	265.85	106.53	248.37	80.69	1128.42	818.41
62	ER13b	ExonRegion	0	35.26	6.75	23.98	7.87	85.13	26.13
63	IG10_SR1	SilentIntergenicRegion	0	7.04	0.85	7.98	1.76	54.92	32.22
64	IG10_AR1	ActiveIntergenicRegion	0	8.76	0.70	5.01	4.02	25.49	8.20
65	IG10_AR2	ActiveIntergenicRegion	0	3.31	1.25	7.70	4.43	60.03	22.73