Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	BRAF	Gene	0	10.79	13.18	97.65	64.18	7.95	5.55
2	288602	Transcript	0	2.85	3.38	32.93	9.47	4.24	1.88
3	469930	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	497784	Transcript	1	0.00	12.81	15.52	54.33	0.50	0.00
5	496384	Transcript	0	7.15	5.05	104.38	37.83	9.05	6.86
6	479537	Transcript	0	0.00	0.00	0.00	5.27	0.00	0.00
7	ER1a	ExonRegion	0	0.45	2.15	3.41	1.54	0.00	0.00
8	E1_Ab	KnownBoundary	0	2.53	5.96	12.92	3.26	4.49	0.00
9	ER1b	ExonRegion	0	2.11	8.31	11.12	4.82	4.33	0.98
10	E1_Ac	KnownBoundary	0	0.00	5.74	18.84	6.74	15.40	4.79
11	ER1c	ExonRegion	0	0.30	2.89	9.02	2.04	2.46	0.99
12	E1a_E2a	KnownJunction	0	0.00	2.64	28.58	4.95	4.16	0.00
13	I1_AR2	ActiveIntronRegion	0	16.88	2.55	4.14	5.35	24.44	35.94
14	ER2a	ExonRegion	0	8.86	3.93	88.77	49.65	6.81	0.00
15	E2a_E3a	KnownJunction	0	25.07	12.32	213.41	120.00	9.57	0.00
16	ER3a	ExonRegion	0	16.00	10.08	111.41	62.32	3.62	0.80
17	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	3.44
18	E3a_E4a	KnownJunction	1	46.88	6.13	70.42	47.63	4.16	5.21
19	ER3b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E3_Db	NovelBoundary	0	7.11	2.64	2.33	5.27	112.87	33.92
21	I3_SR2	SilentIntronRegion	0	4.21	0.83	7.28	2.58	12.63	5.76
22	I3_AR2	ActiveIntronRegion	0	12.60	2.26	7.08	3.90	77.21	29.47
23	I3_SR3	SilentIntronRegion	0	8.64	3.01	9.66	4.36	2.58	2.28
24	I3_AR4	ActiveIntronRegion	0	7.98	4.64	20.42	12.07	52.83	46.46
25	E4_Aa	NovelBoundary	0	8.56	0.00	19.81	3.37	4.00	0.00
26	ER4a	ExonRegion	0	20.67	11.75	67.64	82.01	2.78	5.00
27	E4_Da	NovelBoundary	0	0.00	3.04	16.85	3.04	38.79	9.40
28	E4a_E5a	KnownJunction	1	0.00	20.59	0.00	38.39	0.00	0.00
29	E4a_E6a	KnownJunction	1	3.43	7.99	87.67	24.41	4.83	3.86
30	I4	Intron	0	0.61	0.30	7.22	9.34	11.23	9.36
31	I4_AR1	ActiveIntronRegion	0	0.76	0.38	9.04	11.69	14.06	11.72
32	ER5a	ExonRegion	1	0.00	11.53	11.95	51.78	1.51	0.00
33	E5_Da	NovelBoundary	0	0.00	0.00	6.03	0.00	5.16	9.74
34	E5a_E6a	KnownJunction	1	0.00	6.30	34.61	72.81	0.00	0.00
35	ER6a	ExonRegion	0	24.78	26.87	193.84	209.88	4.97	2.44
36	E6a_E7a	KnownJunction	0	16.75	42.02	356.13	360.87	0.00	0.00
37	ER7a	ExonRegion	0	15.53	35.64	249.91	236.98	2.92	0.01
38	E7_Da	NovelBoundary	0	10.73	0.00	7.06	3.32	0.00	0.00
39	E7a_E8a	KnownJunction	1	20.31	74.53	455.97	386.81	0.00	0.00
40	E8_Aa	NovelBoundary	0	6.75	6.41	12.64	8.97	0.00	0.00
41	ER8a	ExonRegion	0	15.75	41.62	216.04	171.12	2.18	0.00
42	E8_Da	NovelBoundary	0	7.47	6.30	9.39	12.02	0.00	4.20
43	E8a_E9a	KnownJunction	0	24.46	49.10	169.13	151.86	0.00	0.00
44	I8	Intron	0	10.81	4.92	8.60	3.83	11.59	14.71
45	I8_SR1	SilentIntronRegion	0	22.68	2.87	10.51	7.44	6.87	5.12
46	I8_AR2	ActiveIntronRegion	0	35.49	16.44	8.59	3.82	71.00	109.68
47	I8_SR2	SilentIntronRegion	0	15.38	9.14	2.35	1.00	43.36	37.28
48	I8_AR3	ActiveIntronRegion	0	20.11	14.02	6.65	0.89	0.74	0.00
49	I8_SR4	SilentIntronRegion	0	5.60	1.82	19.69	1.76	0.00	0.00
50	E9_Aa	NovelBoundary	0	0.00	9.90	21.12	8.81	0.00	0.00
51	ER9a	ExonRegion	0	20.52	40.24	170.07	151.95	1.68	1.68
52	E9a_E10a	KnownJunction	0	14.58	21.37	170.89	81.83	0.00	0.00
53	ER10a	ExonRegion	0	22.77	41.94	248.90	217.64	0.68	0.35
54	E10a_E11a	KnownJunction	0	34.04	62.32	279.28	288.88	0.00	0.00
55	E11_Aa	NovelBoundary	0	3.25	6.30	16.00	20.39	13.32	14.44
56	ER11a	ExonRegion	0	18.20	42.92	211.40	185.22	3.93	4.23
57	E11a_E12a	KnownJunction	0	18.26	42.24	301.02	236.14	12.24	14.69
58	ER12a	ExonRegion	0	14.22	37.61	195.64	163.12	8.07	5.54
59	E12a_E13a	KnownJunction	0	22.78	23.74	224.86	197.92	0.00	10.16
60	E12a_E14a	NovelJunction	0	0.00	0.00	0.00	6.74	0.00	0.00
61	ER13a	ExonRegion	0	15.62	20.85	204.65	165.60	6.66	2.05
62	E13a_E14a	KnownJunction	0	18.86	23.62	217.28	157.68	4.25	0.00
63	ER14a	ExonRegion	0	14.12	7.91	163.80	103.05	3.55	0.26
64	E14a_E15a	KnownJunction	0	9.64	2.47	127.23	43.55	8.74	4.70
65	E14a_E17a	NovelJunction	0	0.00	0.00	3.24	6.20	0.00	0.00
66	ER15a	ExonRegion	0	8.54	4.43	99.75	32.13	8.41	1.85
67	E15a_E16a	KnownJunction	0	6.81	6.41	74.57	26.10	13.90	0.00
68	ER15b	ExonRegion	0	7.65	5.63	75.13	30.79	9.04	1.85
69	ER16a	ExonRegion	0	12.05	3.58	52.67	34.45	2.89	0.73
70	E16a_E17a	KnownJunction	0	6.75	0.00	42.01	26.43	13.32	9.07
71	ER17a	ExonRegion	0	12.76	5.21	102.07	54.85	1.89	0.46
72	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	7.56	0.00	0.00
73	E17a_E19a	KnownJunction	0	8.56	10.35	190.02	90.42	0.00	0.00
74	ER18a	ExonRegion	0	0.00	0.00	0.00	5.36	0.00	0.00
75	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	2.88	0.00	0.00
76	E19_Aa	NovelBoundary	0	0.00	5.79	19.70	9.52	0.00	0.00
77	ER19a	ExonRegion	0	13.56	11.39	100.51	59.30	2.00	1.10
78	E19a_E20a	KnownJunction	1	28.26	0.00	172.66	84.55	0.00	20.32
79	E19a_E21a	NovelJunction	0	0.00	0.00	3.19	6.09	0.00	0.00
80	ER20a	ExonRegion	0	16.00	15.19	115.78	59.10	15.03	14.82
81	E20_Da	KnownBoundary	0	9.64	9.51	6.43	0.00	0.00	21.58
82	E20a_E21a	KnownJunction	0	3.74	0.00	119.26	46.22	0.00	0.00
83	E20_Db	KnownBoundary	0	3.74	0.00	0.00	3.37	4.16	9.07
84	ER20b	ExonRegion	0	5.60	6.44	4.89	3.99	2.44	10.00
85	ER20c	ExonRegion	0	4.39	4.54	13.18	5.90	9.68	8.79
86	E20_Dc	KnownBoundary	0	13.20	11.59	27.89	5.82	34.79	8.56
87	ER20d	ExonRegion	0	4.68	0.00	7.71	2.46	7.88	1.76
88	E20_Dd	NovelBoundary	0	0.00	10.46	6.94	2.99	0.00	0.00
89	ER21a	ExonRegion	0	10.56	10.11	89.50	29.45	18.10	13.72
90	IG46	Intergenic	0	7.92	4.94	60.43	24.23	9.96	4.59
91	IG46_AR1	ActiveIntergenicRegion	0	7.92	4.95	60.48	24.25	9.97	4.59