Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	HBP1	Gene	0	21.30	15.66	14.92	15.60	30.72	20.29
2	468410	Transcript	0	3.16	2.47	6.60	12.62	0.00	0.00
3	478930	Transcript	0	0.00	2.42	0.00	0.00	0.00	0.00
4	464009	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	222574	Transcript	0	1.29	7.07	4.06	6.27	0.85	0.59
6	468401	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	468116	Transcript	0	0.00	0.00	2.45	1.21	0.00	0.35
8	497535	Transcript	0	3.74	0.00	2.90	0.00	0.00	0.00
9	485846	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	479011	Transcript	0	0.71	0.00	1.03	2.56	0.72	6.59
11	463202	Transcript	0	12.54	6.10	17.19	14.09	16.00	6.34
12	417005	Transcript	0	0	0	0	0	0	0
13	498408	Transcript	0	15.85	5.29	8.33	6.01	53.31	20.50
14	461963	Transcript	0	0.00	0.00	3.19	0.00	0.00	0.00
15	483809	Transcript	0	2.64	0.10	11.30	9.36	0.33	1.97
16	463790	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1a	ExonRegion	0	0.00	0.00	0.00	0.07	0.00	0.00
18	ER1b	ExonRegion	1	1.90	0.00	1.09	7.97	0.00	0.00
19	E1a_E4a	KnownJunction	0	0.00	2.42	0.00	0.00	0.00	0.00
20	E1a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
21	E1a_E5d	KnownJunction	0	6.33	4.95	13.21	25.17	0.00	0.00
22	ER1c	ExonRegion	0	2.25	0.69	2.46	8.90	0.00	0.00
23	ER1d	ExonRegion	0	8.09	14.54	26.43	28.01	0.00	0.00
24	ER1e	ExonRegion	0	3.86	10.80	9.10	5.82	2.56	1.76
25	E1b_E5d	KnownJunction	0	0.00	10.41	3.07	13.00	0.00	0.00
26	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E2_Ab	KnownBoundary	0	3.43	2.98	0.00	0.00	0.00	0.00
28	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E2_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
30	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER2c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
32	ER2d	ExonRegion	0	2.91	3.10	1.73	1.85	0.00	0.00
33	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
34	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	E2a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E2a_E5d	KnownJunction	0	3.74	0.00	2.90	0.00	0.00	0.00
37	E3_Aa	NovelBoundary	0	0.00	0.00	3.53	5.87	0.00	0.00
38	ER3a	ExonRegion	0	0.00	0.00	7.34	3.64	0.00	1.04
39	E3_Da	NovelBoundary	0	0.00	0.00	3.53	10.00	0.00	0.00
40	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
41	I3	Intron	0	0.67	0.00	7.78	5.22	1.33	0.78
42	I3_SR1	SilentIntronRegion	0	0.67	0.00	7.80	5.23	1.34	0.78
43	E4_Aa	NovelBoundary	0	0.00	0.00	14.17	3.32	10.07	19.90
44	ER4a	ExonRegion	0	1.19	1.66	0.90	1.97	0.99	5.35
45	E4_Da	KnownBoundary	0	3.74	0.00	3.30	0.00	5.16	17.80
46	ER4b	ExonRegion	0	1.04	1.45	4.27	4.95	1.53	10.28
47	E4_Db	NovelBoundary	0	3.07	0.00	6.15	3.21	0.00	15.11
48	E4b_E5d	KnownJunction	0	0.00	0.00	0.00	3.37	0.00	0.00
49	E5_Aa	NovelBoundary	0	533.75	319.64	178.06	114.84	451.05	856.27
50	ER5a	ExonRegion	0	0.71	0.00	1.03	2.56	0.72	6.59
51	E5_Ab	KnownBoundary	0	2.59	0.00	2.56	0.00	0.00	0.00
52	ER5b	ExonRegion	0	2.32	0.03	5.34	5.54	0.00	0.00
53	E5_Ac	KnownBoundary	0	3.13	0.00	0.00	5.60	0.00	0.00
54	E5_Ad	KnownBoundary	0	0.00	0.00	3.53	3.21	0.00	0.00
55	ER5c	ExonRegion	0	10.56	12.47	39.11	45.24	1.81	3.70
56	ER5d	ExonRegion	0	21.28	20.46	49.35	53.58	2.36	0.09
57	E5_Ae	KnownBoundary	0	31.09	29.53	71.78	52.14	8.99	0.00
58	ER5e	ExonRegion	0	25.48	32.03	34.43	51.31	5.70	2.59
59	E5_Da	KnownBoundary	1	18.56	32.00	10.30	70.14	9.66	13.94
60	ER5f	ExonRegion	1	19.73	22.09	13.42	52.27	5.85	8.66
61	E5b_E6a	KnownJunction	0	25.97	43.59	48.44	64.70	3.75	9.07
62	ER6a	ExonRegion	0	23.81	30.29	32.84	50.10	1.22	2.84
63	E6_Da	KnownBoundary	0	28.56	27.00	31.37	31.48	0.00	3.53
64	ER6b	ExonRegion	0	37.26	28.72	22.05	41.04	7.44	7.68
65	E6_Db	KnownBoundary	0	42.66	27.39	8.14	7.61	7.82	11.59
66	E6_Dc	KnownBoundary	0	6.51	9.90	6.94	13.48	10.32	0.00
67	ER6c	ExonRegion	0	40.64	36.36	19.55	26.12	9.04	7.17
68	ER6d	ExonRegion	0	29.03	39.37	21.51	28.38	4.25	1.20
69	E6_Dd	NovelBoundary	0	19.46	33.86	20.78	28.71	5.16	0.00
70	E6e_E7a	KnownJunction	1	20.01	48.65	43.21	33.22	8.41	9.07
71	ER6e	ExonRegion	0	23.90	46.04	25.37	24.39	2.10	3.04
72	E7_Aa	NovelBoundary	0	9.88	0.00	3.30	2.39	0.00	0.00
73	ER7a	ExonRegion	0	26.78	36.37	28.40	30.72	5.17	4.18
74	E7a_E8a	KnownJunction	0	26.81	27.79	34.50	34.80	4.58	10.33
75	I7	Intron	0	12.23	2.89	7.05	2.00	9.64	12.43
76	I7_AR1	ActiveIntronRegion	0	12.31	2.91	7.09	2.01	9.69	12.51
77	E8_Aa	NovelBoundary	0	39.53	47.02	7.06	2.61	55.68	82.95
78	ER8a	ExonRegion	0	35.75	29.69	34.61	30.70	28.56	18.44
79	E8_Da	NovelBoundary	0	35.97	24.64	9.56	8.81	88.90	63.22
80	E8a_E9a	KnownJunction	0	17.59	15.07	26.41	14.19	4.25	8.31
81	ER8b	ExonRegion	0	19.27	10.39	23.63	23.70	12.66	3.70
82	E9_Aa	NovelBoundary	1	10.36	0.00	0.00	0.00	31.55	0.00
83	ER9a	ExonRegion	0	22.50	23.00	25.36	36.45	23.55	22.64
84	E9_Da	NovelBoundary	0	10.12	3.04	5.58	11.85	38.21	3.53
85	E9a_E10a	KnownJunction	0	29.77	17.89	19.92	37.73	35.54	10.33
86	E9a_E12a	KnownJunction	0	0.00	0.00	3.19	0.00	0.00	0.00
87	I9_SR1	SilentIntronRegion	0	7.29	6.07	0.58	4.01	18.26	6.89
88	E10_Aa	NovelBoundary	0	0.00	0.00	21.97	8.65	0.00	5.04
89	ER10a	ExonRegion	0	32.57	27.07	35.45	39.33	22.65	27.46
90	E10_Da	NovelBoundary	0	0.00	0.00	14.35	11.31	0.00	5.21
91	E10a_E11b	KnownJunction	0	27.72	45.78	7.06	15.22	37.62	43.41
92	I10	Intron	0	0.76	0.00	16.86	8.56	0.00	2.99
93	I10_AR1	ActiveIntronRegion	0	0.76	0.00	16.90	8.58	0.00	3.00
94	E11_Aa	NovelBoundary	0	3.74	0.00	6.20	9.19	0.00	5.21
95	ER11a	ExonRegion	0	2.64	0.10	11.30	9.36	0.33	1.97
96	E11_Ab	KnownBoundary	0	10.85	0.00	16.51	15.99	5.16	0.00
97	ER11b	ExonRegion	0	41.36	44.78	30.38	34.32	30.45	24.35
98	E11_Da	NovelBoundary	0	9.70	0.00	12.69	10.71	10.07	4.95
99	E11a_E12a	KnownJunction	0	36.21	43.87	15.31	9.41	49.11	27.62
100	I11	Intron	0	3.20	1.67	14.24	8.11	2.14	1.36
101	I11_SR1	SilentIntronRegion	0	1.36	0.67	13.29	5.86	1.70	1.19
102	I11_SR2	SilentIntronRegion	0	1.55	0.86	17.32	4.37	2.40	1.64
103	I11_AR2	ActiveIntronRegion	0	2.91	3.65	19.28	16.00	2.18	0.55
104	I11_SR3	SilentIntronRegion	0	2.25	0.35	10.44	5.78	1.72	0.00
105	I11_AR3	ActiveIntronRegion	0	8.69	1.77	18.44	13.23	2.52	0.16
106	I11_AR4	ActiveIntronRegion	0	4.15	4.08	14.94	4.94	4.74	8.47
107	E12_Aa	NovelBoundary	0	2.77	0.00	21.40	5.44	135.59	196.04
108	ER12a	ExonRegion	0	34.52	35.67	23.60	13.25	60.72	76.85
109	E12_Da	KnownBoundary	0	17.17	17.10	23.45	14.74	150.57	152.05
110	E12a_E12b	NovelJunction	0	3.74	0.00	0.00	0.00	15.48	10.41
111	E12_Ab	KnownBoundary	0	20.13	26.21	18.73	17.02	126.77	71.11
112	ER12b	ExonRegion	0	45.28	39.94	33.07	28.01	112.50	108.19
113	ER12c	ExonRegion	0	53.35	42.17	22.53	29.41	112.29	78.23
114	E12_Db	KnownBoundary	0	12.59	9.51	2.50	9.68	124.10	62.80
115	E12b_E12c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
116	E12b_E13a	KnownJunction	0	49.11	33.97	18.61	36.92	131.01	125.43
117	ER12d	ExonRegion	1	14.93	3.65	8.25	7.08	85.72	26.22
118	E12_Ac	KnownBoundary	1	30.31	6.24	9.62	8.10	100.88	19.56
119	ER12e	ExonRegion	0	15.96	8.05	5.39	9.63	104.34	100.65
120	E12_Dc	KnownBoundary	0	95.14	38.47	26.41	16.42	191.86	128.96
121	E12c_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
122	ER12f	ExonRegion	0	16.76	6.94	8.41	4.94	20.91	14.79
123	E12_Dd	NovelBoundary	0	19.64	3.37	3.53	8.70	7.66	0.00
124	I12	Intron	0	5.38	4.22	10.99	10.34	11.55	5.13
125	I12_AR1	ActiveIntronRegion	0	1.29	2.54	8.62	5.26	2.21	2.83
126	I12_AR2	ActiveIntronRegion	0	6.20	4.51	11.51	11.39	13.16	5.51
127	I12_SR2	SilentIntronRegion	0	1.86	3.69	8.56	5.57	7.83	4.58
128	E13_Aa	NovelBoundary	0	27.90	3.15	5.81	21.04	57.68	26.87
129	ER13a	ExonRegion	0	58.08	35.98	25.42	36.45	57.60	55.97
130	E13_Da	KnownBoundary	0	3.56	0.00	0.00	0.00	17.73	18.05
131	E13_Db	KnownBoundary	0	2.83	5.06	0.00	0.00	7.99	4.95
132	E13b_E14a	KnownJunction	0	52.36	64.96	35.29	27.40	118.61	78.92
133	ER13b	ExonRegion	0	63.34	54.02	43.45	38.78	92.21	55.54
134	ER13c	ExonRegion	0	12.54	6.10	17.19	14.09	16.00	6.34
135	E13_Dc	NovelBoundary	1	6.57	6.97	2.45	2.34	49.69	7.81
136	E14_Aa	NovelBoundary	0	22.17	2.87	6.38	0.00	100.55	53.73
137	ER14a	ExonRegion	0	55.72	41.15	34.28	30.37	79.73	40.05
138	E14_Da	KnownBoundary	1	86.77	41.85	35.92	36.65	252.37	98.56
139	ER14b	ExonRegion	0	99.70	56.06	37.51	28.16	191.96	85.39
140	E14_Db	KnownBoundary	0	191.55	111.31	46.74	48.28	561.17	276.22
141	ER14c	ExonRegion	0	30.80	22.58	10.37	12.23	56.55	33.54
142	ER14d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
143	ER14e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00