Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	STAG3L1	Gene	0	14.84	8.51	3.02	2.90	7.70	9.22
2	339898	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	394930	Transcript	0	0	0	0	0	0	0
4	338421	Transcript	0	0	0	0	0	0	0
5	439813	Transcript	0	0.00	0.00	0.00	0.00	0.33	0.00
6	436837	Transcript	0	10.47	6.50	0.42	1.97	12.82	25.54
7	492323	Transcript	1	54.70	15.81	22.28	23.85	12.81	17.73
8	486800	Transcript	0	11.16	6.71	6.08	2.22	1.03	0.00
9	456374	Transcript	0	0.86	0.00	0.00	0.00	0.00	0.00
10	437344	Transcript	0	8.15	3.31	1.15	0.57	6.01	1.72
11	402225	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
12	440703	Transcript	0	8.30	6.22	1.38	1.18	7.32	11.53
13	404291	Transcript	0	2.54	1.54	0.18	0.40	0.00	0.01
14	487154	Transcript	0	16.30	11.52	3.09	2.42	1.08	0.56
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
18	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
19	ER1c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
20	ER1d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
21	ER1e	ExonRegion	0	1.72	2.53	1.77	4.39	9.16	0.00
22	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
23	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	ER1f	ExonRegion	0	1.06	0.00	0.00	2.15	3.62	0.00
25	ER1g	ExonRegion	0	0.00	0.00	0.00	0.63	0.00	0.00
26	ER1h	ExonRegion	0	0.00	0.00	0.00	1.53	0.00	0.00
27	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	ER2a	ExonRegion	0	0.00	0.01	0.00	0.00	0.99	0.00
29	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
30	E3_Ab	NovelBoundary	0	133.71	48.31	62.39	51.06	64.76	19.65
31	ER3a	ExonRegion	0	3.96	2.08	0.00	2.36	4.18	0.00
32	ER3b	ExonRegion	0	7.98	4.50	2.86	5.78	8.87	0.00
33	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
34	ER4a	ExonRegion	1	37.99	6.78	7.97	4.22	18.27	5.76
35	E4_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
36	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
37	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
38	ER4b	ExonRegion	1	54.70	15.81	22.28	23.85	12.81	17.73
39	ER5a	ExonRegion	0	12.97	3.20	4.94	3.34	1.94	0.00
40	E5_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
41	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER5b	ExonRegion	0	11.16	6.71	6.08	2.22	1.03	0.00
43	E5_Db	NovelBoundary	0	34.95	56.47	31.99	25.39	33.04	0.00
44	ER6a	ExonRegion	0	9.11	4.11	0.00	0.00	7.56	3.29
45	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
46	ER7a	ExonRegion	0	7.86	3.46	0.00	0.00	7.38	5.97
47	E7_Ab	KnownBoundary	0	99.66	54.00	18.79	0.00	267.52	91.85
48	ER7b	ExonRegion	0	7.25	0.05	0.00	0.05	4.77	2.15
49	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
51	E7a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
52	ER8a	ExonRegion	0	0.66	0.00	0.00	0.00	3.65	0.00
53	E8_Da	KnownBoundary	0	36.15	12.99	0.00	3.37	162.06	132.40
54	ER8b	ExonRegion	0	1.86	0.00	0.00	0.00	7.12	0.00
55	E8b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
56	E9_Ab	NovelBoundary	0	198.48	87.12	36.49	6.63	399.11	245.40
57	ER9a	ExonRegion	0	9.54	0.00	0.00	0.00	7.93	0.00
58	E9_Da	KnownBoundary	0	49.95	18.22	3.53	3.37	197.93	161.36
59	ER9b	ExonRegion	1	12.14	0.00	0.00	0.00	7.86	0.83
60	ER9c	ExonRegion	0	7.62	0.00	0.24	0.00	2.49	1.85
61	E9_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
62	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
63	E9b_E12a	NovelJunction	0	6.87	3.15	0.00	0.00	14.98	14.27
64	E9b_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	ER9d	ExonRegion	0	0.86	0.00	0.00	0.00	0.00	0.00
66	E9_Dc	NovelBoundary	0	19.40	33.47	2.33	0.00	0.00	0.00
67	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.61	0.00
68	E10_Da	KnownBoundary	0	151.60	124.19	2.56	2.99	22.06	30.22
69	E10a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
70	ER10b	ExonRegion	0	1.68	0.00	0.00	0.00	0.86	0.00
71	E10_Db	KnownBoundary	0	3.74	9.11	0.00	3.32	9.41	0.00
72	E10b_E15a	KnownJunction	0	2.77	0.00	0.00	0.00	0.00	0.00
73	E10_Dc	KnownBoundary	0	80.56	80.88	9.28	3.15	29.88	8.23
74	ER10c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
75	ER10d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
76	E10_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
77	ER10e	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
78	E10_Dd	KnownBoundary	0	114.61	71.71	0.00	3.26	5.16	17.13
79	ER10f	ExonRegion	0	11.13	2.80	0.59	2.26	0.25	1.22
80	E10_Df	NovelBoundary	0	71.16	57.26	9.73	0.00	13.32	16.46
81	E10f_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
82	ER10g	ExonRegion	0	7.13	1.56	0.00	5.92	0.00	3.24
83	E11_Aa	NovelBoundary	0	71.04	57.43	6.49	2.34	48.11	283.02
84	ER11a	ExonRegion	0	24.30	17.94	1.25	0.00	38.46	73.39
85	E11_Da	NovelBoundary	0	38.87	62.99	3.53	6.20	85.07	96.89
86	E12_Aa	NovelBoundary	0	13.20	24.75	0.00	12.56	25.30	3.78
87	ER12a	ExonRegion	0	32.45	13.22	4.62	2.27	24.05	6.89
88	E12_Da	NovelBoundary	0	539.29	249.67	235.16	102.66	418.92	568.72
89	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
90	E13_Aa	NovelBoundary	0	99.42	89.88	15.03	8.75	442.06	482.33
91	ER13a	ExonRegion	0	0.17	0.00	0.00	0.00	0.00	0.00
92	E13_Da	NovelBoundary	1	49.35	91.17	6.83	0.00	8.99	12.43
93	E14_Aa	NovelBoundary	0	63.63	68.84	5.29	2.77	4.58	0.00
94	ER14a	ExonRegion	0	48.90	34.57	9.28	7.27	3.25	1.67
95	E14_Da	NovelBoundary	0	41.88	24.80	18.56	2.39	4.66	4.37
96	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
97	ER15a	ExonRegion	0	4.59	0.06	0.00	0.00	0.00	0.00
98	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
99	E15a_E16b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
100	ER16a	ExonRegion	0	9.99	9.05	2.98	2.42	1.46	0.23
101	E16_Ab	KnownBoundary	0	19.82	32.73	9.45	0.00	9.32	0.00
102	ER16b	ExonRegion	0	15.65	19.28	6.06	2.69	3.74	0.00
103	E16_Da	KnownBoundary	0	22.05	24.30	2.56	5.76	3.41	0.00
104	ER16c	ExonRegion	0	20.45	15.84	2.52	2.31	27.83	45.90
105	ER17a	ExonRegion	0	5.09	3.07	0.36	0.80	0.00	0.01