Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CPSF4	Gene	0	47.84	28.06	6.79	4.65	83.01	43.20
2	436336	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	441811	Transcript	0	0	0	0	0	0	0
4	451876	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	292476	Transcript	0	0	0	0	0	0	0
6	430038	Transcript	0	4.02	3.78	0.21	0.20	4.67	13.06
7	441580	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	412686	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	484112	Transcript	0	5.89	3.51	0.00	1.24	0.00	0.00
10	452047	Transcript	0	2.32	4.36	1.30	0.86	0.54	0.74
11	471455	Transcript	0	1.55	0.00	0.00	0.00	0.00	0.00
12	440514	Transcript	0	5.44	2.54	0.99	0.09	2.12	0.93
13	465132	Transcript	0	18.89	7.13	4.08	2.96	0.17	0.00
14	469897	Transcript	1	38.64	13.83	10.15	8.74	11.40	58.13
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1c	ExonRegion	0	5.45	4.55	2.60	0.85	0.34	0.34
18	E1_Ad	KnownBoundary	0	13.14	6.97	0.00	3.15	4.49	0.00
19	ER1d	ExonRegion	0	18.53	9.45	7.33	5.39	5.56	3.70
20	E1_Ae	KnownBoundary	0	24.04	13.05	15.48	8.54	14.40	9.49
21	ER1e	ExonRegion	0	24.81	27.59	14.24	15.32	4.60	5.50
22	E1a_E4b	KnownJunction	0	24.10	34.25	15.31	0.00	4.25	3.69
23	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
26	ER2b	ExonRegion	0	1.10	0.00	0.00	0.00	0.00	0.00
27	ER2c	ExonRegion	0	3.11	1.08	0.00	0.00	0.00	0.00
28	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
30	E3_Aa	NovelBoundary	0	287.78	180.77	26.30	14.79	782.66	610.78
31	ER3a	ExonRegion	0	0.00	0.01	0.00	0.00	0.00	0.00
32	E3_Da	NovelBoundary	0	124.97	68.79	46.85	12.78	161.89	163.04
33	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
34	E4_Ab	NovelBoundary	1	0.00	13.61	0.00	0.00	5.08	4.03
35	ER4a	ExonRegion	0	4.64	8.73	2.61	1.72	1.08	1.48
36	ER4b	ExonRegion	0	21.21	37.99	13.45	1.85	8.78	8.82
37	E4_Da	NovelBoundary	0	9.52	8.77	9.22	2.39	20.31	5.12
38	E4a_E5a	KnownJunction	0	2.65	6.19	0.00	0.00	4.58	29.38
39	E4a_E6a	KnownJunction	0	49.11	32.62	12.64	0.00	24.39	7.56
40	ER4c	ExonRegion	0	33.56	37.25	16.78	0.67	13.53	15.64
41	ER5a	ExonRegion	0	9.40	5.16	0.62	0.61	9.42	9.78
42	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
43	E6_Aa	NovelBoundary	0	11.81	12.49	2.50	2.66	0.00	0.00
44	ER6a	ExonRegion	0	75.62	49.62	17.96	17.32	21.08	4.82
45	E6_Da	NovelBoundary	0	2.95	13.72	12.75	0.00	8.32	0.00
46	E6a_E7a	KnownJunction	0	103.34	81.95	24.31	5.65	20.14	8.90
47	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
48	Ix	Intron	0	7.81	7.68	1.78	0.88	1.49	0.00
49	Ix_SR1	SilentIntronRegion	0	7.85	7.72	1.79	0.89	1.49	0.00
50	ER7a	ExonRegion	0	91.21	59.09	27.33	9.35	13.70	4.89
51	E7_Ab	KnownBoundary	0	112.98	42.58	33.98	11.15	28.88	8.90
52	ER7b	ExonRegion	0	92.94	30.53	21.49	13.77	17.57	3.62
53	E7a_E8a	KnownJunction	1	89.54	21.77	10.36	10.93	34.46	7.89
54	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
55	ER8a	ExonRegion	0	78.28	53.25	13.54	7.62	22.81	5.90
56	E8_Da	KnownBoundary	0	2.47	0.00	0.00	0.00	0.00	0.00
57	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
58	ER8b	ExonRegion	1	100.11	62.33	13.11	6.98	25.81	2.55
59	ER8c	ExonRegion	0	5.89	3.51	0.00	1.24	0.00	0.00
60	E8_Db	NovelBoundary	0	3.07	6.07	2.62	12.07	0.00	4.20
61	ER9a	ExonRegion	0	83.07	48.01	12.23	11.15	19.05	5.93
62	E9_Da	KnownBoundary	0	6.45	6.75	6.20	14.25	0.00	0.00
63	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	E9a_E11b	KnownJunction	1	72.49	20.98	13.83	2.39	28.80	15.78
65	E9a_E11c	KnownJunction	0	6.99	14.29	0.00	2.66	9.16	4.79
66	E9a_E11d	KnownJunction	0	0.00	0.00	0.00	6.63	0.00	0.00
67	ER9b	ExonRegion	0	18.89	7.13	4.08	2.96	0.17	0.00
68	Ix_SR1	SilentIntronRegion	0	34.23	10.51	6.02	8.02	4.76	0.00
69	E10_Aa	NovelBoundary	1	99.42	11.53	10.19	6.74	18.23	0.00
70	ER10a	ExonRegion	0	0.97	0.00	0.00	0.00	0.00	0.00
71	E10_Da	NovelBoundary	1	52.18	10.12	6.38	25.83	4.00	0.00
72	E10a_E11b	KnownJunction	0	3.68	0.00	0.00	0.00	0.00	0.00
73	E11_Aa	NovelBoundary	0	36.39	22.44	10.36	6.74	10.15	0.00
74	ER11a	ExonRegion	1	38.64	13.83	10.15	8.74	11.40	58.13
75	E11_Ab	KnownBoundary	1	61.70	25.14	10.82	16.15	48.86	194.36
76	ER11b	ExonRegion	0	109.16	55.62	22.41	15.16	44.09	57.91
77	E11_Da	KnownBoundary	0	80.26	48.54	19.47	18.60	78.74	33.50
78	E11_Ac	KnownBoundary	0	14.82	3.43	0.00	0.00	20.48	10.33
79	E11_Ad	KnownBoundary	0	42.54	9.56	6.77	3.26	9.66	24.26
80	ER11c	ExonRegion	0	106.27	44.78	20.04	13.40	45.70	32.40
81	ER11d	ExonRegion	0	103.46	49.17	18.10	13.64	47.01	29.62
82	ER11e	ExonRegion	0	85.88	45.86	8.31	8.43	48.64	28.33
83	E11b_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	E11b_E12b	KnownJunction	0	122.74	61.98	12.64	15.44	109.70	47.18
85	E12_Aa	NovelBoundary	0	15.91	6.52	10.99	3.32	8.91	13.18
86	ER12a	ExonRegion	0	10.87	5.08	1.99	0.18	4.23	1.85
87	E12_Ab	KnownBoundary	0	20.55	9.00	3.53	0.00	14.90	5.21
88	ER12b	ExonRegion	0	90.01	43.96	11.53	10.02	67.02	21.12
89	E12_Da	KnownBoundary	0	74.96	31.44	3.36	0.00	163.31	99.32
90	E12_Db	KnownBoundary	0	24.58	17.44	5.92	0.00	73.33	30.73
91	ER12c	ExonRegion	0	63.15	37.40	6.91	0.00	83.99	32.14
92	ER12d	ExonRegion	1	95.99	40.96	9.93	1.38	136.76	33.72
93	E12_Dc	KnownBoundary	1	130.64	33.35	8.60	3.37	257.70	42.90
94	E12_Dd	KnownBoundary	1	113.76	61.31	17.02	2.34	386.88	94.20
95	ER12e	ExonRegion	1	136.73	59.42	15.38	3.19	245.96	62.79
96	ER12f	ExonRegion	0	121.13	81.75	8.83	4.40	404.75	194.74
97	ER12g	ExonRegion	0	27.45	19.99	0.00	0.00	449.01	232.17