Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	STAG3L2	Gene	0	55.35	37.05	6.70	4.14	46.49	43.31
2	457631	Transcript	0	182.35	122.74	14.71	10.31	20.83	16.28
3	359898	Transcript	0	0	0	0	0	0	0
4	470380	Transcript	0	0	0	0	0	0	0
5	423186	Transcript	0	16.02	5.13	4.35	0.00	3.62	1.85
6	429726	Transcript	0	0.77	0.00	0.40	0.00	0.00	0.00
7	380775	Transcript	0	2.90	4.98	4.14	1.63	15.06	11.32
8	448772	Transcript	0	0	0	0	0	0	0
9	340270	Transcript	0	3.38	2.08	0.43	0.43	4.34	1.48
10	456236	Transcript	0	1.06	3.12	0.00	0.00	0.00	0.00
11	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1b	ExonRegion	0	10.66	2.55	4.83	1.56	0.27	2.31
13	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Ad	KnownBoundary	0	49.71	32.34	28.69	11.31	7.82	14.61
15	ER1c	ExonRegion	0	38.36	16.62	25.89	9.69	1.81	3.70
16	ER1d	ExonRegion	0	27.50	16.77	18.49	11.19	18.98	4.97
17	E1_Da	KnownBoundary	0	14.88	3.49	0.00	0.00	0.00	5.21
18	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
19	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ae	KnownBoundary	0	0.00	0.00	3.53	0.00	5.16	0.00
21	ER1e	ExonRegion	0	16.02	5.13	4.35	0.00	3.62	1.85
22	ER1f	ExonRegion	0	9.54	3.72	1.17	0.00	4.10	0.65
23	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	ER2a	ExonRegion	0	2.31	0.00	1.19	0.00	0.00	0.00
25	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	ER3a	ExonRegion	0	39.45	19.98	16.55	9.72	23.46	8.37
27	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	ER4a	ExonRegion	0	3.38	2.08	0.43	0.43	4.34	1.48
29	ER4b	ExonRegion	1	27.28	13.63	6.52	4.14	33.85	9.70
30	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	ER5a	ExonRegion	0	9.29	5.63	3.67	1.87	12.58	4.11
33	E5_Ab	KnownBoundary	0	24.83	20.25	3.53	8.59	31.88	10.16
34	ER5b	ExonRegion	0	8.42	4.02	6.02	2.40	11.63	3.89
35	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	ER6a	ExonRegion	1	15.10	6.78	2.41	3.05	14.66	1.14
37	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
38	ER7a	ExonRegion	1	35.79	11.37	6.22	2.88	60.25	13.95
39	E7_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
40	E7a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
41	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER7b	ExonRegion	0	12.11	8.07	4.49	1.89	13.19	4.34
43	E7_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
44	ER7c	ExonRegion	0	34.41	37.97	2.23	3.77	104.10	73.68
45	E7_Db	KnownBoundary	1	96.17	66.48	17.02	3.37	370.56	170.85
46	E7_Dc	KnownBoundary	1	75.50	25.93	15.88	9.24	139.92	118.21
47	ER7d	ExonRegion	0	18.25	35.91	4.27	0.62	76.71	64.00
48	ER7e	ExonRegion	0	20.68	24.88	4.35	0.55	65.60	51.98
49	E7d_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	ER8a	ExonRegion	0	80.15	52.06	6.77	7.81	300.27	197.46
51	E8_Da	KnownBoundary	0	128.53	81.33	15.77	14.68	1179.36	790.11
52	ER8b	ExonRegion	0	103.39	91.28	9.74	8.31	539.32	564.79
53	E8_Db	KnownBoundary	0	116.96	86.79	13.61	0.00	476.19	927.97
54	E8b_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
55	ER8c	ExonRegion	0	135.41	95.01	12.24	8.44	211.03	304.65
56	E8_Dc	KnownBoundary	0	51.10	15.80	3.53	5.44	0.00	8.31
57	ER8d	ExonRegion	0	364.71	245.48	29.42	20.62	41.66	32.56
58	E8_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
59	ER8e	ExonRegion	0	163.64	128.88	12.14	5.64	17.72	15.23
60	E8_Dd	KnownBoundary	1	239.94	134.88	6.89	5.60	91.23	31.74
61	ER8f	ExonRegion	0	84.67	44.51	4.78	0.99	19.44	6.25
62	E8_De	KnownBoundary	0	137.08	92.02	2.73	2.94	37.37	14.69
63	ER8g	ExonRegion	0	68.56	40.25	0.00	1.66	5.88	6.51
64	E8_Df	KnownBoundary	0	652.09	484.83	260.78	135.99	1028.79	2123.01
65	E8f_E9a	KnownJunction	0	3.31	2.98	5.35	0.00	13.07	21.66
66	ER8h	ExonRegion	0	19.86	10.78	1.02	1.71	5.20	2.15
67	E8_Dg	NovelBoundary	0	271.82	120.03	16.51	20.61	12.90	17.80
68	ER8i	ExonRegion	0	1.06	3.12	0.00	0.00	0.00	0.00
69	I8_AR2	ActiveIntronRegion	0	81.99	48.26	6.50	4.31	239.41	124.72
70	I8_AR4	ActiveIntronRegion	0	12.67	16.16	4.35	4.55	0.00	0.00
71	E9_Aa	NovelBoundary	0	127.74	115.36	56.30	14.95	370.31	574.85
72	ER9a	ExonRegion	0	0.00	0.86	0.00	0.00	0.00	0.00
73	E9_Da	NovelBoundary	0	27.54	33.18	10.70	4.89	36.71	12.34
74	E9a_E10a	KnownJunction	0	6.99	13.50	9.85	6.52	39.29	20.15
75	E10_Aa	NovelBoundary	0	118.89	97.64	39.28	26.04	299.81	283.27
76	ER10a	ExonRegion	0	1.32	2.59	1.35	0.00	7.88	3.46