Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	PTPN12	Gene	0	58.91	36.31	35.27	33.72	116.30	93.41
2	248594	Transcript	0	0.69	0.92	0.22	0.08	0.57	4.87
3	460731	Transcript	0	1.38	0.00	5.58	2.87	3.51	0.82
4	433369	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	415482	Transcript	0	2.11	0.00	0.00	0.00	0.00	0.00
6	407343	Transcript	0	0	0	0	0	0	0
7	435495	Transcript	0	0.00	0.00	3.07	6.25	0.00	3.61
8	418110	Transcript	0	0.02	0.00	0.00	0.00	0.00	0.04
9	440186	Transcript	0	0	0	0	0	0	0
10	427742	Transcript	0	0	0	0	0	0	0
11	447995	Transcript	0	4.05	1.56	5.79	1.97	0.30	0.93
12	481154	Transcript	0	1.25	0.43	6.02	5.18	0.47	0.28
13	494248	Transcript	0	1.61	1.46	2.16	2.06	2.34	0.00
14	464313	Transcript	0	5.68	5.06	2.70	3.60	0.58	1.52
15	ER1a	ExonRegion	0	0.69	0.92	0.22	0.08	0.57	4.87
16	E1_Ab	KnownBoundary	1	2.95	5.96	2.68	0.00	0.00	71.11
17	ER1b	ExonRegion	1	26.92	12.34	23.80	19.25	1.96	22.20
18	E1a_E5a	KnownJunction	1	25.55	21.54	49.58	8.10	9.91	86.06
19	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
20	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
21	E2_Ac	KnownBoundary	0	0.00	6.07	3.53	0.00	0.00	0.00
22	ER2c	ExonRegion	0	2.17	0.00	0.00	0.06	0.00	0.10
23	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E2a_E5a	KnownJunction	0	3.74	0.00	0.00	0.00	0.00	0.00
25	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	I3_AR2	ActiveIntronRegion	0	2.15	0.00	11.07	1.85	0.00	0.18
28	I3_AR6	ActiveIntronRegion	0	4.67	0.00	10.16	1.73	0.00	0.00
29	ER4a	ExonRegion	0	0.05	0.00	0.00	0.00	0.00	0.08
30	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	I4_AR4	ActiveIntronRegion	0	1.32	3.12	4.90	3.51	95.73	37.78
32	ER5a	ExonRegion	1	37.87	27.86	47.31	35.71	3.24	27.13
33	E5_Ab	KnownBoundary	0	69.54	26.83	68.94	85.09	4.91	9.40
34	ER5b	ExonRegion	0	57.52	29.72	42.07	60.12	7.23	10.43
35	E5a_E6a	KnownJunction	0	81.59	35.21	45.43	46.22	19.23	32.66
36	E5a_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
37	ER6a	ExonRegion	0	53.74	18.70	45.54	29.85	4.09	9.71
38	E6a_E7b	KnownJunction	0	71.52	26.15	74.12	27.30	9.24	14.94
39	E6a_E8b	KnownJunction	0	0.00	0.00	3.07	6.25	0.00	3.61
40	ER7a	ExonRegion	0	16.19	6.23	23.17	7.90	1.21	3.70
41	ER7b	ExonRegion	0	33.76	19.79	54.54	32.81	6.79	14.44
42	E7_Da	KnownBoundary	0	3.74	0.00	2.73	0.00	12.74	0.00
43	E7a_E8b	KnownJunction	1	23.50	15.92	34.50	14.08	4.49	39.12
44	ER7c	ExonRegion	0	1.38	0.00	5.58	2.87	3.51	0.82
45	ER8a	ExonRegion	0	2.51	0.86	11.26	10.35	0.95	0.50
46	E8_Ab	KnownBoundary	0	0.00	0.00	3.24	12.02	4.66	0.00
47	E8_Ac	KnownBoundary	0	0.00	0.00	0.00	9.95	0.00	4.53
48	ER8b	ExonRegion	0	25.34	24.93	48.52	40.21	7.23	18.51
49	ER8c	ExonRegion	0	32.35	22.44	55.53	39.90	10.27	20.07
50	E8b_E9a	KnownJunction	0	40.49	19.35	63.53	46.71	26.05	38.96
51	ER8d	ExonRegion	0	36.53	19.32	50.40	31.67	12.66	19.44
52	ER9a	ExonRegion	0	46.54	19.28	72.63	39.64	7.43	16.84
53	E9_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
54	E9a_E10a	KnownJunction	0	70.50	26.77	123.19	60.14	4.33	18.97
55	E9_Db	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
56	ER9b	ExonRegion	0	0.00	0.00	2.17	2.15	0.00	1.85
57	ER9c	ExonRegion	0	0.00	0.00	0.79	0.02	0.00	0.06
58	ER10a	ExonRegion	0	40.05	16.72	86.00	41.47	3.53	8.39
59	E10a_E11a	KnownJunction	0	37.24	20.92	54.48	28.49	8.16	9.15
60	ER11a	ExonRegion	0	35.73	13.84	51.87	39.31	2.98	10.20
61	E11_Da	KnownBoundary	0	38.50	10.35	76.56	52.58	4.91	7.22
62	ER11b	ExonRegion	0	51.19	16.43	50.80	41.59	8.53	1.07
63	E11_Db	KnownBoundary	0	3.74	3.49	6.77	0.00	4.41	0.00
64	E11b_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	E11b_E13b	KnownJunction	0	76.65	24.86	50.27	41.32	28.97	3.95
66	ER11c	ExonRegion	0	1.61	1.46	2.16	2.06	2.34	0.00
67	E11_Dc	NovelBoundary	0	6.51	0.00	15.60	0.00	5.16	5.21
68	I11_AR3	ActiveIntronRegion	0	1.81	7.57	7.92	3.16	0.00	0.00
69	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
70	E12a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	ER13a	ExonRegion	0	5.68	5.06	2.70	3.60	0.58	1.52
72	E13_Ab	KnownBoundary	0	21.21	13.16	6.38	8.97	4.00	4.53
73	ER13b	ExonRegion	0	61.42	29.09	44.77	48.05	10.25	9.26
74	E13a_E14a	KnownJunction	0	68.03	40.89	46.79	59.65	19.14	27.45
75	ER14a	ExonRegion	0	62.62	26.95	52.14	58.67	9.99	13.30
76	E14_Da	KnownBoundary	1	76.40	23.68	65.64	54.64	17.81	25.77
77	ER14b	ExonRegion	1	95.01	27.01	78.21	78.74	7.37	11.62
78	E14b_E15a	KnownJunction	1	137.32	31.83	91.54	100.54	8.24	25.02
79	ER15a	ExonRegion	0	71.08	27.91	82.67	121.01	7.52	14.38
80	E15a_E16a	KnownJunction	0	65.56	29.98	94.10	140.06	8.49	19.23
81	ER16a	ExonRegion	0	80.11	36.45	98.65	141.68	6.03	11.93
82	E16a_E17a	KnownJunction	0	77.79	54.56	96.43	186.50	14.57	9.65
83	ER17a	ExonRegion	0	80.05	60.35	75.09	79.43	45.18	26.38
84	E17a_E18a	KnownJunction	0	159.08	108.50	59.77	77.92	83.32	70.27
85	E17a_E19a	NovelJunction	0	0.00	6.69	0.00	0.00	0.00	0.00
86	ER18a	ExonRegion	0	95.63	61.63	50.08	52.14	60.29	32.40
87	E18a_E19a	KnownJunction	0	117.80	70.70	34.10	40.40	88.65	42.23
88	ER19a	ExonRegion	0	110.72	55.06	47.86	46.19	62.06	48.62
89	E19a_E20a	KnownJunction	0	114.49	43.25	60.06	44.97	94.72	100.58
90	E19a_E21a	NovelJunction	0	3.62	0.00	3.47	0.00	14.40	0.00
91	E20a_E21a	KnownJunction	0	146.66	100.74	49.07	30.72	61.43	52.56
92	ER20a	ExonRegion	0	142.21	79.89	65.88	45.10	54.65	47.95
93	ER21a	ExonRegion	0	132.43	95.09	60.39	57.07	121.89	88.81
94	E21a_E22a	KnownJunction	0	156.36	60.35	66.32	22.29	181.79	207.12
95	ER21b	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	0.00
96	ER22a	ExonRegion	0	149.24	75.55	19.52	13.15	167.76	126.82
97	E22_Da	KnownBoundary	0	197.52	101.19	5.98	0.00	454.05	294.35
98	ER22b	ExonRegion	0	124.92	87.15	12.73	3.65	927.56	755.60