Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	SHFM1	Gene	0	29.04	20.07	3.17	1.87	77.84	75.67
2	248566	Transcript	0	1.42	1.97	1.06	1.32	3.05	2.76
3	449279	Transcript	0	0.00	0.00	0.34	1.07	0.00	0.00
4	476463	Transcript	0	0.23	0.23	0.00	0.47	0.20	0.20
5	417009	Transcript	0	0.00	0.00	0.00	1.00	0.00	0.00
6	444799	Transcript	0	4.09	8.31	3.16	1.34	0.69	3.32
7	413065	Transcript	0	0	0	0	0	0	0
8	488005	Transcript	0	12.86	6.83	5.54	4.33	24.18	38.32
9	466986	Transcript	0	0.01	0.04	0.00	0.00	1.81	0.00
10	482389	Transcript	0	2.48	0.95	4.94	1.98	2.05	0.81
11	493858	Transcript	0	0.00	0.00	0.00	0.00	0.15	0.00
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1_Af	KnownBoundary	0	11.81	2.64	2.85	2.94	4.58	3.86
15	ER1b	ExonRegion	0	0.00	0.00	0.00	0.62	0.77	0.00
16	ER1c	ExonRegion	0	9.33	3.98	2.72	2.15	2.56	0.46
17	ER1d	ExonRegion	0	25.34	13.16	4.35	3.59	4.22	4.32
18	ER1e	ExonRegion	0	46.45	27.01	5.28	5.54	9.30	8.99
19	ER1f	ExonRegion	0	310.64	134.56	15.49	16.52	96.80	102.15
20	E1_Ag	KnownBoundary	0	662.76	290.06	22.60	28.00	333.94	353.96
21	ER1g	ExonRegion	0	509.99	365.72	21.97	14.16	385.16	579.95
22	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
23	E1a_E4b	KnownJunction	0	278.74	284.26	17.87	21.10	383.13	884.31
24	E1a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E2_Aa	NovelBoundary	0	0.00	0.00	9.28	3.15	27.30	42.23
26	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E2_Da	NovelBoundary	0	0.00	0.00	10.59	0.00	4.33	57.85
28	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E3_Aa	NovelBoundary	0	548.45	415.09	154.38	117.94	1010.98	2351.54
30	ER3a	ExonRegion	0	0.92	0.91	0.00	1.88	0.79	0.81
31	E3_Da	NovelBoundary	0	2.53	0.00	6.72	9.13	0.00	0.00
32	I3_AR2	ActiveIntronRegion	0	2.11	1.08	12.37	0.00	3.54	4.18
33	E4_Aa	NovelBoundary	0	0.00	0.00	10.25	0.00	0.00	0.00
34	ER4a	ExonRegion	0	2.48	0.95	4.94	1.98	2.05	0.81
35	E4_Ab	KnownBoundary	0	20.07	0.00	2.68	0.00	10.24	13.01
36	ER4b	ExonRegion	0	569.20	428.76	15.65	15.26	1436.66	837.67
37	E4_Da	NovelBoundary	0	3.74	13.11	5.86	2.56	0.00	0.00
38	E4a_E5a	KnownJunction	0	961.08	555.37	6.94	9.41	6183.81	3220.57
39	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	9.07
40	E4a_E9a	KnownJunction	0	3.62	12.99	2.45	0.00	0.00	5.12
41	E4a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	E4a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
43	I4_AR3	ActiveIntronRegion	0	8.18	1.40	3.15	1.13	6.66	4.72
44	E5_Aa	NovelBoundary	0	26.99	0.00	0.00	0.00	53.44	28.04
45	ER5a	ExonRegion	0	389.66	269.21	7.63	1.73	1960.76	2018.81
46	E5_Da	KnownBoundary	0	5.72	0.00	0.00	0.00	20.98	22.25
47	ER5b	ExonRegion	0	2.84	3.93	2.12	2.63	6.10	5.51
48	E5_Db	NovelBoundary	0	10.54	0.00	6.15	10.98	4.25	9.57
49	I5_AR1	ActiveIntronRegion	0	6.98	1.56	16.97	9.06	8.96	4.45
50	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	5.76	0.00	10.33
51	ER6a	ExonRegion	0	4.00	0.00	1.35	0.00	2.20	4.77
52	E6_Da	KnownBoundary	0	2.71	0.00	5.35	0.00	3.41	14.27
53	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
54	ER6b	ExonRegion	0	2.15	3.28	2.92	2.27	1.98	4.29
55	E6_Db	KnownBoundary	0	3.37	0.00	5.41	0.00	0.00	18.97
56	ER6c	ExonRegion	0	25.71	13.66	11.08	8.67	48.36	76.65
57	E6_Dc	NovelBoundary	0	1708.86	1510.13	614.68	464.13	2780.31	3774.60
58	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
59	E7_Da	NovelBoundary	0	0.00	0.00	3.30	6.74	0.00	0.00
60	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	2.28	0.00	0.00
61	ER8a	ExonRegion	0	0.00	0.00	1.35	2.00	0.00	0.00
62	I8_AR3	ActiveIntronRegion	0	1.95	2.69	1.23	0.78	45.35	70.34
63	ER9a	ExonRegion	0	4.55	3.62	3.87	2.68	1.38	1.52
64	I9_AR1	ActiveIntronRegion	0	4.47	4.17	2.77	1.57	21.77	11.28
65	ER10a	ExonRegion	0	0.00	0.00	0.00	2.00	0.00	0.00
66	ER11a	ExonRegion	0	0.03	0.11	0.00	0.00	1.43	0.00
67	E11a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	4.00	0.00
68	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
69	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
70	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	1.18	0.00
71	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
72	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.47	0.00
73	E14b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
74	ER14b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
75	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
76	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00