Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	POLR2J4	Gene	0	11.61	7.04	4.58	3.33	4.64	4.19
2	412640	Transcript	0	0	0	0	0	0	0
3	422304	Transcript	0	0	0	0	0	0	0
4	326391	Transcript	0	11.71	8.10	2.43	2.22	10.26	11.17
5	454572	Transcript	0	9.43	1.94	2.68	1.07	13.15	8.69
6	427076	Transcript	0	0	0	0	0	0	0
7	418424	Transcript	0	8.84	2.42	0.54	0.00	8.64	4.47
8	419923	Transcript	0	0	0	0	0	0	0
9	398980	Transcript	0	1.49	0.62	0.39	0.11	0.07	0.00
10	ER1a	ExonRegion	0	0.00	0.00	0.00	2.15	0.00	0.00
11	ER1b	ExonRegion	0	3.89	5.03	3.32	6.35	0.00	0.78
12	ER1c	ExonRegion	0	12.67	14.54	15.21	15.08	0.00	1.85
13	ER1d	ExonRegion	0	33.14	37.92	36.57	27.59	0.00	1.85
14	E1_Ae	KnownBoundary	0	153.29	176.89	136.22	91.51	5.16	9.82
15	ER1e	ExonRegion	0	48.64	42.11	43.66	33.80	0.00	2.17
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
17	E1b_E2b	KnownJunction	0	33.26	9.67	0.00	0.00	34.54	16.04
18	ER1f	ExonRegion	0	2.11	0.00	0.00	0.00	0.00	1.85
19	E2_Ab	NovelBoundary	0	7.23	12.71	3.13	0.00	0.00	0.00
20	ER2a	ExonRegion	0	34.84	24.93	28.24	21.54	0.00	0.93
21	E2_Ac	KnownBoundary	0	341.11	189.94	175.33	128.81	131.35	60.70
22	ER2b	ExonRegion	0	8.31	3.28	3.64	6.74	1.28	1.85
23	ER2c	ExonRegion	0	27.37	31.27	22.26	23.62	9.33	0.68
24	E2a_E3a	KnownJunction	0	91.17	62.99	64.04	48.23	16.23	0.00
25	E2a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E2b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	ER2d	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
28	ER3a	ExonRegion	0	71.79	53.45	42.27	41.91	9.70	2.19
29	ER3b	ExonRegion	0	45.16	25.19	18.88	22.19	2.94	3.13
30	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
31	E3a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E3_Db	KnownBoundary	0	0.00	0.00	0.00	3.10	0.00	0.00
33	ER3c	ExonRegion	0	2.11	4.16	4.35	0.00	1.81	0.00
34	ER3d	ExonRegion	0	21.10	14.32	4.85	4.44	7.63	6.51
35	E3_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
36	ER3e	ExonRegion	0	40.95	33.65	20.56	8.42	22.77	17.65
37	E3_Dc	NovelBoundary	1	72.85	9.39	55.84	15.39	124.77	61.04
38	E3c_E4a	KnownJunction	1	39.53	3.43	20.44	3.32	0.00	0.00
39	E3c_E7a	KnownJunction	0	2.59	0.00	0.00	0.00	0.00	0.00
40	E3_Dd	NovelBoundary	0	157.93	89.54	59.15	25.72	14.07	15.36
41	ER3f	ExonRegion	0	2.32	1.88	0.00	0.00	12.89	15.82
42	Ix_AR1	ActiveIntronRegion	0	16.89	6.23	2.17	0.00	3.62	0.00
43	I3_SR3	SilentIntronRegion	0	8.67	4.78	1.94	1.02	3.43	3.17
44	Ix	Intron	0	8.31	2.97	1.56	2.06	0.43	0.33
45	Ix_SR1	SilentIntronRegion	0	8.32	2.98	1.56	2.06	0.43	0.33
46	ER4a	ExonRegion	0	11.81	8.59	7.47	3.19	0.00	0.00
47	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
48	Ix_SR1	SilentIntronRegion	0	8.27	4.07	0.00	0.00	0.00	0.00
49	ER5a	ExonRegion	0	23.27	15.43	7.51	2.96	0.00	0.00
50	E5a_E6a	KnownJunction	0	57.42	39.99	14.29	8.75	0.00	0.00
51	ER6a	ExonRegion	0	47.63	26.23	10.72	5.09	0.00	0.00
52	E6a_E7a	KnownJunction	1	30.97	3.49	0.00	3.37	0.00	0.00
53	I6	Intron	0	30.12	21.16	2.54	3.07	14.21	13.50
54	I6_AR1	ActiveIntronRegion	0	149.99	101.35	12.47	15.26	109.76	101.21
55	I6_AR2	ActiveIntronRegion	0	11.63	8.22	0.87	0.00	1.99	0.49
56	I6_SR3	SilentIntronRegion	0	14.02	9.65	1.12	1.27	7.92	9.22
57	ER7a	ExonRegion	0	38.91	14.80	5.51	3.68	0.00	0.00
58	E7a_E8a	KnownJunction	0	7.23	0.00	0.00	3.15	0.00	0.00
59	ER8a	ExonRegion	0	46.69	18.40	5.85	1.70	1.25	0.00
60	E8_Da	NovelBoundary	0	9.70	6.97	0.00	0.00	0.00	0.00
61	E8a_E9a	KnownJunction	0	21.21	2.42	0.00	0.00	0.00	0.00
62	E8a_E11b	KnownJunction	0	54.29	17.89	11.90	0.00	5.08	4.70
63	ER9a	ExonRegion	0	9.91	3.00	1.00	0.66	0.00	0.00
64	E9_Da	NovelBoundary	1	0.00	15.07	0.00	0.00	0.00	4.37
65	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
66	E9a_E11b	KnownJunction	0	25.19	8.32	2.68	3.37	0.00	0.00
67	E10_Aa	NovelBoundary	0	8.56	6.97	2.62	3.37	0.00	0.00
68	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
69	E10_Da	NovelBoundary	0	16.45	6.81	3.53	0.00	0.00	0.00
70	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	E11_Aa	NovelBoundary	1	23.92	0.00	0.00	6.74	0.00	0.00
72	ER11a	ExonRegion	0	2.39	2.39	0.24	0.09	0.04	0.00
73	E11_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
74	ER11b	ExonRegion	1	50.10	11.56	7.03	3.60	1.05	0.00
75	E11_Da	KnownBoundary	0	57.24	17.38	0.00	2.66	0.00	0.00
76	ER11c	ExonRegion	0	26.34	8.34	1.52	6.12	0.02	0.00
77	E11b_E12a	KnownJunction	0	45.67	19.46	6.20	2.28	0.00	0.00
78	ER12a	ExonRegion	1	34.67	5.90	4.02	0.68	2.87	0.00
79	E12_Da	NovelBoundary	0	2.77	5.62	0.00	0.00	0.00	0.00
80	E12a_E13a	KnownJunction	0	16.03	11.25	0.00	0.00	0.00	0.00
81	ER13a	ExonRegion	0	8.27	4.37	0.00	1.97	0.63	0.00
82	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
83	E13a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
84	ER14a	ExonRegion	0	6.57	1.31	2.08	0.60	0.40	0.00
85	E14_Da	NovelBoundary	0	27.24	2.92	0.00	0.00	0.00	0.00
86	I14	Intron	0	44.05	28.58	9.58	9.72	8.12	11.41
87	I14_AR1	ActiveIntronRegion	0	79.77	51.16	14.98	16.16	15.66	22.41
88	I14_SR2	SilentIntronRegion	0	15.11	10.90	9.09	4.70	0.00	0.00
89	I14_AR2	ActiveIntronRegion	0	17.53	13.68	5.99	6.30	1.03	1.06
90	E15_Aa	NovelBoundary	0	116.96	115.36	31.71	11.85	382.30	189.66
91	ER15a	ExonRegion	0	3.34	1.07	1.02	1.21	2.57	1.14
92	E15_Da	KnownBoundary	0	13.14	0.00	6.03	0.00	10.07	5.21
93	E15a_E16a	KnownJunction	0	0.00	4.72	0.00	0.00	4.99	0.00
94	ER15b	ExonRegion	0	16.26	3.88	5.35	2.15	26.29	17.38
95	E15_Db	NovelBoundary	0	3.43	0.00	9.51	0.00	61.68	56.00
96	Ix	Intron	0	2.45	0.48	3.04	6.01	0.84	0.43
97	Ix_SR1	SilentIntronRegion	0	2.46	0.48	3.05	6.03	0.84	0.43
98	E16_Aa	NovelBoundary	0	3.74	5.96	6.15	3.32	4.33	8.73
99	ER16a	ExonRegion	0	2.52	6.02	3.46	0.85	7.43	4.42
100	E16_Da	NovelBoundary	0	2.83	3.04	5.29	6.42	24.80	25.02
101	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
102	ER17a	ExonRegion	0	4.31	3.75	3.10	2.14	2.03	3.40