Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	UPP1	Gene	0	61.56	16.10	19.96	5.61	44.63	11.61
2	416681	Transcript	0	0.00	0.00	0.32	0.00	1.70	0.00
3	331803	Transcript	0	0.86	0.00	0.00	0.00	8.76	0.69
4	432131	Transcript	0	0	0	0	0	0	0
5	457596	Transcript	0	0	0	0	0	0	0
6	341253	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	429491	Transcript	0	4.42	0.06	1.46	0.00	0.25	0.00
8	421046	Transcript	0	10.96	0.75	5.85	1.38	2.70	0.00
9	395564	Transcript	0	0	0	0	0	0	0
10	436673	Transcript	0	0.29	0.62	0.32	0.00	0.00	0.00
11	395560	Transcript	0	0	0	0	0	0	0
12	444999	Transcript	0	3.74	3.43	2.45	0.00	0.00	0.00
13	482015	Transcript	0	34.50	3.37	12.15	3.26	2.16	2.60
14	417464	Transcript	0	0	0	0	0	0	0
15	495446	Transcript	0	62.89	10.98	31.57	9.45	16.20	2.15
16	ER1a	ExonRegion	0	0.00	0.00	0.64	0.00	3.40	0.00
17	E1_Ac	KnownBoundary	0	13.50	5.85	10.02	0.00	20.48	5.21
18	ER1b	ExonRegion	0	0.00	0.00	2.17	0.00	5.85	0.00
19	ER1c	ExonRegion	0	4.93	2.11	4.61	1.27	5.78	1.85
20	E1_Ad	KnownBoundary	0	13.38	2.98	6.55	3.26	0.00	3.53
21	E1_Ae	KnownBoundary	0	21.87	6.69	10.36	3.04	0.00	0.00
22	ER1d	ExonRegion	0	16.89	5.29	11.07	3.96	0.52	0.60
23	ER1e	ExonRegion	0	3.97	1.14	7.47	0.80	1.80	0.94
24	E1a_E2g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E1b_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E1b_E2e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E1b_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	ER1f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
29	ER2a	ExonRegion	0	4.42	0.06	1.46	0.00	0.25	0.00
30	E2_Ab	KnownBoundary	0	13.92	0.00	3.53	0.00	0.00	0.00
31	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E2_Ad	KnownBoundary	0	3.74	0.00	0.00	0.00	5.16	0.00
33	ER2b	ExonRegion	0	8.87	2.08	2.17	0.00	3.01	0.00
34	E2_Ae	KnownBoundary	0	0.00	3.49	0.00	0.00	4.58	0.00
35	ER2c	ExonRegion	0	10.56	2.08	2.17	0.00	3.62	0.00
36	E2_Af	KnownBoundary	0	3.74	0.00	0.00	0.00	0.00	0.00
37	ER2d	ExonRegion	0	7.70	2.08	4.22	0.00	3.62	0.00
38	E2_Ag	KnownBoundary	0	3.74	0.00	7.06	0.00	0.00	0.00
39	E2_Ah	KnownBoundary	0	10.00	0.00	3.36	0.00	4.25	0.00
40	ER2e	ExonRegion	0	6.72	2.08	4.35	0.00	3.62	0.00
41	ER2f	ExonRegion	0	8.45	2.08	4.35	0.00	3.62	0.00
42	ER2g	ExonRegion	0	9.50	2.08	4.35	0.00	3.07	0.00
43	ER2h	ExonRegion	0	8.96	0.97	2.63	1.32	1.60	0.00
44	E2_Ai	KnownBoundary	0	3.74	6.30	0.00	3.37	5.16	0.00
45	E2_Aj	KnownBoundary	0	50.31	5.91	3.53	0.00	15.81	11.84
46	ER2i	ExonRegion	0	24.61	3.57	2.24	2.15	6.38	2.95
47	ER2j	ExonRegion	0	36.14	6.78	7.81	0.31	9.56	5.55
48	E2_Da	NovelBoundary	0	0.00	9.00	0.00	0.00	0.00	0.00
49	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E2a_E4a	KnownJunction	0	39.53	14.79	9.91	3.10	25.47	12.01
51	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.12
52	ER3a	ExonRegion	0	1.15	2.47	1.29	0.00	0.00	0.00
53	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
54	ER4a	ExonRegion	0	25.77	15.99	10.69	0.00	7.15	4.85
55	E4_Ab	KnownBoundary	0	24.52	23.00	12.47	0.00	8.16	14.02
56	ER4b	ExonRegion	1	29.87	15.75	12.73	0.00	14.86	13.41
57	E4a_E5a	KnownJunction	0	45.98	17.38	9.28	0.00	72.17	46.18
58	ER5a	ExonRegion	0	72.05	18.03	16.58	2.72	21.42	19.82
59	E5a_E6a	KnownJunction	1	39.29	0.00	3.53	0.00	5.16	18.13
60	E5a_E7a	KnownJunction	1	62.43	0.00	24.31	6.52	0.00	0.00
61	E5a_E10b	KnownJunction	0	34.65	9.96	0.00	0.00	34.54	26.61
62	E6_Aa	NovelBoundary	0	0.00	0.00	20.38	12.07	0.00	0.00
63	ER6a	ExonRegion	1	27.87	1.85	12.75	3.49	8.04	7.49
64	E6_Da	KnownBoundary	0	33.44	3.49	20.89	6.74	19.98	10.41
65	ER6b	ExonRegion	0	29.70	5.66	20.15	5.81	7.13	6.90
66	E6_Db	NovelBoundary	0	0.00	0.00	12.75	3.26	0.00	0.00
67	E6b_E7a	KnownJunction	0	40.07	9.22	34.61	10.11	19.31	17.55
68	ER7a	ExonRegion	0	55.43	15.07	36.38	10.31	11.89	8.63
69	E7_Da	KnownBoundary	0	46.94	16.20	20.21	5.76	18.89	9.40
70	E7a_E8a	KnownJunction	0	3.74	3.43	2.45	0.00	0.00	0.00
71	E7a_E9a	NovelJunction	0	16.21	5.40	0.00	3.37	0.00	0.00
72	E7a_E10b	KnownJunction	0	6.57	6.75	0.00	0.00	4.33	5.21
73	ER7b	ExonRegion	0	31.10	10.85	13.58	3.44	13.95	6.81
74	E7_Db	NovelBoundary	0	3.49	0.00	16.96	2.28	0.00	0.00
75	E7b_E8a	KnownJunction	0	27.60	18.05	12.87	5.87	31.63	22.16
76	E7b_E9a	NovelJunction	0	33.38	9.34	39.45	13.27	0.00	0.00
77	E8_Aa	NovelBoundary	0	3.56	8.61	6.15	0.00	0.00	0.00
78	ER8a	ExonRegion	0	36.50	12.09	10.82	3.86	14.22	4.65
79	E8b_E9a	KnownJunction	0	44.23	5.85	21.63	13.32	8.82	0.00
80	E8b_E10b	KnownJunction	0	0.00	3.37	0.00	0.00	0.00	0.00
81	ER8b	ExonRegion	0	42.75	8.31	23.35	8.62	5.42	1.85
82	ER8c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
83	ER9a	ExonRegion	0	41.75	5.32	24.22	6.41	6.06	0.00
84	E9_Da	KnownBoundary	1	20.73	3.37	21.23	0.00	25.80	0.00
85	ER9b	ExonRegion	0	10.96	0.75	5.85	1.38	2.70	0.00
86	E9_Db	NovelBoundary	0	34.41	9.79	9.73	22.73	168.80	83.37
87	I9	Intron	0	59.86	10.23	26.52	7.63	1.42	0.00
88	I9_AR1	ActiveIntronRegion	0	60.01	10.25	26.58	7.65	1.43	0.00
89	E10_Aa	NovelBoundary	1	56.34	0.00	39.39	24.58	4.66	0.00
90	ER10a	ExonRegion	0	62.89	10.98	31.57	9.45	16.20	2.15
91	E10_Ab	KnownBoundary	0	180.11	62.43	22.43	2.39	178.87	10.16
92	ER10b	ExonRegion	0	266.25	90.20	20.69	3.84	218.28	48.98
93	E10a_E11a	KnownJunction	0	236.81	87.91	31.14	6.52	326.53	63.89
94	ER11a	ExonRegion	0	232.42	92.40	9.58	2.36	376.86	86.58
95	E11a_E12a	KnownJunction	0	231.93	103.89	6.38	5.71	546.19	317.94
96	ER12a	ExonRegion	0	137.61	57.46	3.68	4.26	137.62	77.95
97	E12_Da	KnownBoundary	0	94.72	40.38	3.53	0.00	169.80	52.98
98	ER12b	ExonRegion	0	77.39	26.38	2.27	0.11	332.51	96.82
99	E12_Db	KnownBoundary	0	2.83	0.00	0.00	0.00	12.90	0.00
100	E12_Dc	KnownBoundary	0	10.18	6.41	2.96	0.00	26.22	4.70
101	ER12c	ExonRegion	0	13.72	6.23	4.35	0.00	24.41	7.40
102	ER12d	ExonRegion	0	5.43	0.70	2.09	0.55	32.03	7.55
103	ER12e	ExonRegion	0	1.72	0.00	0.00	0.00	17.51	1.39