Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	C7orf44	Gene	0	16.49	7.78	12.52	6.18	33.65	20.06
2	438444	Transcript	0	8.64	6.90	16.34	8.64	6.68	8.66
3	415798	Transcript	0	2.57	6.14	6.42	0.00	14.06	0.00
4	446330	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	415076	Transcript	0	12.13	7.23	1.93	2.68	36.81	21.50
6	420441	Transcript	0	0	0	0	0	0	0
7	431651	Transcript	0	0.27	0.00	0.89	0.27	0.00	0.00
8	448704	Transcript	0	0.87	0.33	6.82	0.83	0.08	0.05
9	478504	Transcript	0	1.36	0.49	3.16	0.76	0.32	0.00
10	457939	Transcript	0	0	0	0	0	0	0
11	395880	Transcript	0	0	0	0	0	0	0
12	310564	Transcript	0	0.96	0.00	0.00	0.93	0.58	1.06
13	223336	Transcript	0	0	0	0	0	0	0
14	470156	Transcript	0	0	0	0	0	0	0
15	418140	Transcript	0	4.11	0.52	7.72	4.91	0.65	0.00
16	446564	Transcript	0	3.37	0.00	7.06	0.00	0.00	0.00
17	451651	Transcript	0	1.77	0.00	2.84	0.30	0.60	0.47
18	395879	Transcript	0	1.46	0.66	6.66	3.09	0.18	0.00
19	459713	Transcript	0	0	0	0	0	0	0
20	490251	Transcript	0	11.16	3.88	5.49	2.76	27.97	16.08
21	488813	Transcript	0	5.59	1.44	4.50	1.11	6.92	3.01
22	ER1a	ExonRegion	0	0.24	0.00	0.00	0.00	0.00	0.00
23	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E1_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
28	E1_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E1_Ah	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
30	E1_Ai	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER1b	ExonRegion	0	3.17	0.00	0.22	1.08	0.00	0.00
32	E1_Aj	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
33	E1_Ak	KnownBoundary	0	3.74	0.00	0.00	3.37	0.00	0.00
34	E1_Al	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
35	ER1c	ExonRegion	0	7.74	0.00	2.90	2.15	0.00	0.00
36	ER1d	ExonRegion	1	13.93	0.83	4.35	2.15	0.00	0.00
37	E1_Am	KnownBoundary	1	39.65	6.13	22.03	2.83	12.40	3.69
38	ER1e	ExonRegion	1	16.89	2.08	4.35	2.15	0.00	0.00
39	ER1f	ExonRegion	1	19.00	2.08	6.52	2.15	0.00	0.00
40	ER1g	ExonRegion	1	19.00	2.08	6.52	2.15	0.00	0.00
41	ER1h	ExonRegion	1	21.11	2.08	8.69	2.15	0.00	0.00
42	ER1i	ExonRegion	1	25.64	2.67	12.72	4.31	4.39	0.00
43	ER1j	ExonRegion	1	32.94	4.57	14.77	5.17	5.42	0.00
44	ER1k	ExonRegion	1	46.45	6.23	21.73	8.62	5.42	0.00
45	ER1l	ExonRegion	0	50.44	15.47	25.10	9.81	6.43	1.44
46	ER1m	ExonRegion	0	100.12	53.14	54.99	25.66	33.47	15.43
47	E1a_E2a	KnownJunction	0	3.43	10.46	13.04	0.00	30.30	0.00
48	E1a_E3a	KnownJunction	0	27.05	9.84	34.55	18.76	44.03	5.21
49	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E1a_E7a	KnownJunction	0	3.74	0.00	0.00	0.00	0.00	0.00
51	E1a_E8c	KnownJunction	0	127.38	62.83	36.38	16.09	67.50	55.41
52	I1_AR1	ActiveIntronRegion	0	1.13	1.10	10.55	3.77	8.62	1.93
53	I1_AR2	ActiveIntronRegion	0	4.89	0.00	7.83	4.82	27.76	9.49
54	ER2a	ExonRegion	0	1.69	4.86	6.21	0.00	11.90	0.00
55	E2_Da	NovelBoundary	0	9.64	0.00	7.40	0.00	24.22	12.34
56	E2a_E8c	KnownJunction	0	2.59	3.09	0.00	0.00	0.00	0.00
57	I2_AR1	ActiveIntronRegion	0	1.54	0.00	5.82	0.00	16.29	17.14
58	I2_SR6	SilentIntronRegion	0	0.06	0.00	11.53	7.82	0.00	0.00
59	I2_AR9	ActiveIntronRegion	0	0.00	0.00	5.37	5.52	0.00	0.00
60	E3_Aa	NovelBoundary	0	3.74	0.00	7.06	6.58	0.00	0.00
61	ER3a	ExonRegion	0	9.68	8.05	18.38	6.40	15.08	2.08
62	E3_Da	NovelBoundary	0	0.00	0.00	9.56	5.65	5.08	5.12
63	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	E3a_E8c	KnownJunction	0	3.37	19.07	2.50	3.04	12.07	5.21
65	E4_Aa	NovelBoundary	0	3.62	0.00	12.07	11.26	0.00	0.00
66	ER4a	ExonRegion	0	4.07	1.46	9.48	2.27	0.95	0.00
67	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
68	E5_Aa	NovelBoundary	0	10.30	0.00	3.53	0.00	4.16	0.00
69	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
70	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	ER5b	ExonRegion	0	0.00	0.00	1.81	0.00	0.00	0.00
72	ER6a	ExonRegion	0	1.33	0.00	2.64	1.35	0.00	0.00
73	E6_Da	NovelBoundary	0	6.63	2.59	12.18	0.00	0.00	0.00
74	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
75	ER7a	ExonRegion	0	2.07	0.00	3.18	1.05	1.13	7.17
76	E7_Da	KnownBoundary	0	3.74	0.00	0.00	3.15	0.00	10.24
77	E7a_E8c	KnownJunction	0	2.65	0.00	0.00	0.00	3.50	0.00
78	ER7b	ExonRegion	0	1.92	0.00	0.00	1.86	1.15	2.12
79	E7_Db	NovelBoundary	0	2.77	3.49	17.82	2.50	5.08	8.56
80	E7b_E8c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
81	E8_Aa	NovelBoundary	0	0.00	0.00	14.63	9.62	4.33	0.00
82	ER8a	ExonRegion	0	1.46	0.66	6.66	3.09	0.18	0.00
83	E8_Ab	KnownBoundary	0	0.00	3.49	2.79	5.22	0.00	0.00
84	ER8b	ExonRegion	0	2.75	1.39	4.81	4.98	0.48	0.27
85	E8_Ac	KnownBoundary	0	7.05	0.00	0.00	5.65	0.00	0.00
86	ER8c	ExonRegion	0	74.42	43.27	23.98	16.65	38.32	25.60
87	E8_Da	KnownBoundary	0	0.00	0.00	8.48	2.61	0.00	0.00
88	E8a_E8d	KnownJunction	0	34.23	26.94	8.88	9.13	38.45	21.49
89	ER8d	ExonRegion	0	0.65	0.38	5.19	1.90	0.00	0.00
90	E8_Db	KnownBoundary	0	3.43	0.00	6.49	0.00	0.00	0.00
91	ER8e	ExonRegion	0	0.87	0.33	6.82	0.83	0.08	0.05
92	E8_Ad	KnownBoundary	0	3.43	0.00	9.17	4.51	0.00	0.00
93	ER8f	ExonRegion	0	81.74	30.34	53.63	19.69	218.00	59.58
94	E8_Dc	KnownBoundary	0	0.00	0.00	10.70	2.45	0.00	0.00
95	E8c_E8e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
96	E8c_E8g	KnownJunction	0	163.47	50.06	80.89	27.57	1289.73	330.79
97	ER8g	ExonRegion	0	0.00	0.89	11.67	6.67	0.00	0.00
98	E8_Dd	KnownBoundary	0	0.00	0.00	23.11	15.22	0.00	0.00
99	ER8h	ExonRegion	0	0.00	2.79	19.70	8.33	0.00	0.00
100	E8_De	KnownBoundary	0	0.00	2.81	29.03	9.08	0.00	0.00
101	ER8i	ExonRegion	0	3.50	4.16	20.38	10.27	0.00	0.00
102	E8_Df	KnownBoundary	0	7.47	2.81	5.98	3.37	0.00	0.00
103	E8_Dg	KnownBoundary	1	0.00	0.00	0.00	12.23	0.00	0.00
104	ER8j	ExonRegion	0	6.69	3.81	9.78	10.77	0.00	0.00
105	ER8k	ExonRegion	0	4.11	0.52	7.72	4.91	0.65	0.00
106	E8_Ae	KnownBoundary	0	6.93	0.00	9.56	0.00	0.00	0.00
107	ER8l	ExonRegion	0	5.35	0.00	2.89	1.25	0.00	1.02
108	E8_Dh	KnownBoundary	0	3.74	0.00	0.00	2.39	0.00	4.62
109	ER8m	ExonRegion	0	3.55	0.00	5.69	0.60	1.19	0.95
110	E8_Af	KnownBoundary	0	3.74	0.00	9.45	0.00	5.08	0.00
111	ER8n	ExonRegion	0	7.04	2.22	7.32	1.83	1.71	0.00
112	E8_Di	KnownBoundary	0	13.38	2.53	24.82	3.37	0.00	0.00
113	ER8o	ExonRegion	0	6.76	0.78	5.91	4.04	5.30	0.22
114	E8_Ag	KnownBoundary	0	8.80	0.00	6.26	7.50	13.40	4.53
115	ER8p	ExonRegion	0	110.56	47.07	32.97	19.00	265.23	97.18
116	E8j_E10b	KnownJunction	0	120.93	65.53	29.89	10.11	702.09	269.08
117	I8_AR2	ActiveIntronRegion	0	12.62	5.17	16.64	20.95	0.00	0.83
118	I8_SR2	SilentIntronRegion	0	7.89	4.28	20.54	9.97	0.79	0.81
119	E9_Aa	NovelBoundary	0	6.27	2.81	0.00	5.76	0.00	0.00
120	ER9a	ExonRegion	0	3.35	2.20	4.25	1.59	0.76	1.37
121	E9_Da	NovelBoundary	0	12.59	6.97	11.73	6.74	8.24	0.00
122	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
123	E10_Aa	NovelBoundary	0	25.07	6.52	18.27	0.00	51.69	33.33
124	ER10a	ExonRegion	0	13.44	2.11	9.23	1.74	20.01	7.66
125	E10_Ab	KnownBoundary	0	12.96	6.41	12.75	4.89	63.01	0.00
126	ER10b	ExonRegion	0	149.10	62.57	46.11	28.09	420.17	114.60
127	E10a_E11a	KnownJunction	0	151.60	89.88	52.09	24.85	810.80	181.43
128	ER11a	ExonRegion	0	138.04	80.58	44.28	21.16	365.10	115.33
129	E11_Da	KnownBoundary	0	100.69	50.34	21.40	5.76	676.20	217.20
130	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
131	E11_Db	KnownBoundary	0	78.51	36.67	3.42	3.37	588.39	328.77
132	E11b_E12a	KnownJunction	0	12.83	0.00	35.92	18.00	0.00	0.00
133	E11b_E13a	KnownJunction	0	3.37	0.00	7.06	0.00	0.00	0.00
134	E11b_E13b	KnownJunction	0	3.13	0.00	0.00	0.00	5.16	0.00
135	ER11b	ExonRegion	0	147.99	56.66	39.30	17.82	642.17	290.64
136	ER11c	ExonRegion	0	71.49	36.02	2.94	2.99	466.79	330.15
137	E11_Dc	KnownBoundary	0	9.76	15.69	0.00	0.00	12.40	0.00
138	E11_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
139	E11_De	KnownBoundary	0	5.91	0.00	6.09	3.15	53.35	23.34
140	ER11d	ExonRegion	1	27.45	4.16	10.86	4.31	46.10	31.47
141	ER11e	ExonRegion	1	25.34	4.16	10.86	4.31	34.35	20.36
142	ER11f	ExonRegion	0	15.57	6.98	5.07	1.47	50.65	31.94
143	E11_Df	NovelBoundary	0	6583.88	3560.38	1739.42	1120.36	22855.45	25979.91
144	I11	Intron	0	6.41	2.67	9.15	3.89	8.70	7.24
145	I11_AR2	ActiveIntronRegion	0	16.49	4.87	4.54	1.12	76.23	61.68
146	I11_SR2	SilentIntronRegion	0	17.08	7.50	14.42	3.59	2.45	0.00
147	I11_AR3	ActiveIntronRegion	0	9.01	0.41	9.47	5.32	0.00	2.51
148	E12_Aa	NovelBoundary	0	10.42	0.00	15.14	11.42	0.00	0.00
149	ER12a	ExonRegion	0	18.12	8.54	26.92	13.51	14.67	29.43
150	E12_Da	NovelBoundary	0	2.53	2.36	3.53	9.46	24.97	39.63
151	I12	Intron	0	7.08	3.30	28.01	14.90	13.90	5.89
152	I12_SR1	SilentIntronRegion	0	8.87	0.00	9.12	3.19	2.02	0.00
153	I12_AR2	ActiveIntronRegion	0	4.79	4.59	26.25	13.36	11.93	3.22
154	I12_SR2	SilentIntronRegion	0	6.64	4.95	21.04	14.40	1.92	0.00
155	I12_AR3	ActiveIntronRegion	0	9.33	1.85	31.55	16.86	18.32	9.72
156	Ix	Intron	0	16.93	1.59	13.83	3.02	50.40	18.14
157	Ix_AR1	ActiveIntronRegion	0	16.99	1.59	13.87	3.03	50.57	18.20
158	Ix	Intron	0	6.64	2.83	10.92	6.07	1.02	1.39
159	Ix_AR3	ActiveIntronRegion	0	5.81	3.06	11.83	4.95	1.51	1.74
160	Ix_AR2	ActiveIntronRegion	0	8.97	4.55	12.40	8.04	0.57	2.34
161	Ix_AR1	ActiveIntronRegion	0	9.17	1.93	11.98	9.21	0.00	0.00
162	Ix_AR4	ActiveIntronRegion	0	2.69	0.88	11.06	8.23	0.00	0.00
163	Ix_AR3	ActiveIntronRegion	0	9.08	1.27	13.84	4.30	7.23	0.71
164	Ix_SR2	SilentIntronRegion	0	14.06	6.86	6.79	1.96	57.24	30.04
165	Ix_AR1	ActiveIntronRegion	0	6.20	4.07	4.26	1.58	11.52	4.08
166	E13_Aa	NovelBoundary	0	2.89	0.00	11.04	2.94	34.46	9.49
167	ER13a	ExonRegion	1	13.21	1.02	13.09	8.38	13.81	10.40
168	E13_Ab	KnownBoundary	0	25.37	5.74	10.53	7.78	23.81	33.41
169	ER13b	ExonRegion	0	25.83	9.67	8.12	6.39	21.62	9.23
170	E13_Da	KnownBoundary	0	63.81	16.37	8.77	4.78	57.93	11.17
171	ER13c	ExonRegion	0	34.97	23.00	9.85	6.03	48.33	21.91
172	E13_Db	KnownBoundary	0	35.91	24.97	5.75	6.31	172.05	75.90
173	ER13d	ExonRegion	0	21.13	14.46	3.87	5.35	68.45	42.99