Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	WIPI2	Gene	0	46.84	34.96	18.85	10.82	93.89	54.16
2	288828	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	401525	Transcript	0	0	0	0	0	0	0
4	404704	Transcript	0	0	0	0	0	0	0
5	466014	Transcript	0	1.38	0.00	0.91	1.15	1.51	0.40
6	485854	Transcript	0	0.73	0.00	0.38	1.11	0.00	0.00
7	382384	Transcript	0	0	0	0	0	0	0
8	496867	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	475309	Transcript	0	2.80	3.14	3.87	2.72	0.07	0.02
10	484262	Transcript	0	0	0	0	0	0	0
11	413866	Transcript	0	0.00	1.72	0.00	1.34	12.34	23.62
12	315176	Transcript	0	3.74	10.46	3.36	0.00	0.00	0.00
13	465102	Transcript	0	5.31	0.64	0.78	0.00	0.00	0.00
14	480238	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
15	488359	Transcript	0	0.88	1.56	0.00	0.00	0.00	0.00
16	471851	Transcript	0	6.46	3.30	2.00	1.28	1.43	0.78
17	479690	Transcript	0	3.41	2.15	0.45	1.81	5.51	2.62
18	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
19	ER1b	ExonRegion	0	0.00	0.00	1.09	0.00	0.00	0.00
20	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
21	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E1_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
23	E1_Af	KnownBoundary	0	0.00	0.00	2.50	0.00	0.00	0.00
24	ER1c	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
25	ER1d	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
26	ER1e	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
27	ER1f	ExonRegion	0	3.02	4.15	5.14	3.50	4.39	3.38
28	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.20
29	E1a_E4a	KnownJunction	0	27.72	15.97	11.33	9.52	58.60	34.34
30	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
31	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	I2_AR3	ActiveIntronRegion	0	1.41	0.00	16.17	4.91	0.00	0.00
33	ER3a	ExonRegion	0	0.00	3.46	0.28	1.68	0.47	2.33
34	E3_Da	KnownBoundary	0	0.00	0.00	2.45	5.65	0.00	0.00
35	E3a_E4a	KnownJunction	0	0.00	6.97	0.00	0.00	0.00	3.78
36	ER3b	ExonRegion	0	2.77	0.00	1.82	2.29	3.01	0.81
37	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
38	E4_Aa	NovelBoundary	0	11.21	0.00	9.28	0.00	22.47	57.59
39	ER4a	ExonRegion	0	46.27	29.44	21.04	15.49	49.45	15.50
40	E4_Da	NovelBoundary	0	5.91	3.04	6.03	0.00	196.52	260.52
41	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	E4a_E6e	KnownJunction	0	73.93	38.19	35.52	23.49	104.88	52.47
43	ER5a	ExonRegion	0	2.19	0.00	1.13	0.00	0.00	0.00
44	E5a_E6e	KnownJunction	0	0.00	0.00	0.00	3.32	0.00	0.00
45	ER6a	ExonRegion	0	1.91	3.49	3.13	3.69	0.00	0.00
46	E6_Ab	KnownBoundary	1	0.00	12.32	5.41	0.00	0.00	0.00
47	ER6b	ExonRegion	0	1.81	2.62	4.09	1.28	0.00	0.00
48	E6_Ac	KnownBoundary	0	6.99	0.00	11.95	3.37	0.00	0.00
49	ER6c	ExonRegion	0	5.12	4.65	6.86	0.74	0.00	0.00
50	E6_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
51	E6a_E6d	KnownJunction	0	3.74	10.46	3.36	0.00	0.00	0.00
52	E6_Ad	KnownBoundary	0	0.00	0.00	3.53	0.00	0.00	0.00
53	ER6d	ExonRegion	0	2.11	6.23	2.17	2.15	0.00	0.00
54	ER6e	ExonRegion	0	4.50	6.10	5.62	2.81	1.18	0.52
55	E6_Ae	KnownBoundary	0	3.56	0.00	3.53	6.09	0.00	0.00
56	E6_Af	KnownBoundary	0	95.51	57.43	47.42	37.46	46.94	43.83
57	ER6f	ExonRegion	0	79.82	50.58	45.37	32.98	46.66	27.84
58	ER6g	ExonRegion	0	90.77	70.12	58.30	38.01	67.41	28.29
59	E6c_E8a	KnownJunction	0	136.54	84.48	90.63	44.91	149.24	86.81
60	ER6h	ExonRegion	0	108.73	72.71	65.18	36.62	75.94	39.80
61	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
62	E7_Da	NovelBoundary	0	3184.84	2251.39	1212.17	906.78	9608.70	13991.10
63	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	E8_Ab	NovelBoundary	0	128.77	89.43	67.46	46.82	122.11	52.81
65	ER8a	ExonRegion	0	113.58	79.02	69.00	41.23	74.56	34.60
66	ER8b	ExonRegion	1	117.05	77.05	66.90	38.87	79.23	20.04
67	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
68	E8a_E10a	KnownJunction	1	120.81	64.79	72.12	44.86	184.70	41.31
69	ER9a	ExonRegion	0	1.40	0.00	0.00	0.00	0.00	0.00
70	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	ER10a	ExonRegion	0	88.78	55.52	61.85	37.28	110.10	42.90
72	E10_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E10a_E10b	KnownJunction	1	144.74	69.86	69.34	52.36	308.55	118.46
74	ER10b	ExonRegion	0	1.39	2.66	1.00	0.07	0.20	0.07
75	E10_Ab	KnownBoundary	0	3.56	0.00	3.53	0.00	0.00	0.00
76	ER10c	ExonRegion	0	132.78	80.07	169.36	104.87	190.93	77.38
77	E10_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
78	E10_Dc	KnownBoundary	0	0.00	0.00	0.00	2.45	0.00	0.00
79	E10c_E11a	KnownJunction	1	148.47	94.15	119.60	73.84	463.62	173.62
80	ER10d	ExonRegion	0	139.35	85.18	175.97	116.33	242.27	87.01
81	ER10e	ExonRegion	0	5.11	3.26	7.47	4.40	0.00	0.00
82	E10_Dd	NovelBoundary	0	6.75	0.00	0.00	5.60	0.00	0.00
83	I10_AR7	ActiveIntronRegion	0	12.90	3.00	8.45	10.05	0.80	0.00
84	I10_AR8	ActiveIntronRegion	0	2.11	7.38	2.17	0.00	0.00	0.00
85	ER11a	ExonRegion	0	119.75	62.65	91.03	76.82	232.82	87.27
86	E11_Da	KnownBoundary	0	12.23	9.39	6.38	0.00	0.00	0.00
87	E11a_E12a	KnownJunction	0	130.76	72.05	93.59	73.40	364.40	168.50
88	ER11b	ExonRegion	0	5.31	0.64	0.78	0.00	0.00	0.00
89	E11_Db	NovelBoundary	0	23.20	3.21	12.64	3.37	0.00	0.00
90	I11	Intron	0	9.63	5.45	3.45	2.01	1.31	0.51
91	I11_AR2	ActiveIntronRegion	0	15.53	8.50	4.42	4.03	0.00	0.00
92	I11_AR3	ActiveIntronRegion	0	6.28	7.22	2.64	0.31	0.52	0.00
93	I11_AR4	ActiveIntronRegion	0	13.79	3.45	0.82	4.05	6.81	3.45
94	ER12a	ExonRegion	0	118.30	85.70	155.81	84.15	206.22	102.22
95	E12_Da	KnownBoundary	0	153.83	105.74	210.06	102.71	433.91	200.82
96	ER12b	ExonRegion	0	126.26	103.17	176.46	99.09	237.37	110.39
97	E12_Db	KnownBoundary	0	3.74	10.46	0.00	0.00	0.00	0.00
98	E12b_E12c	KnownJunction	1	121.48	79.14	81.69	51.55	420.67	135.09
99	ER12c	ExonRegion	0	2.11	6.23	0.00	0.00	0.00	0.00
100	ER12d	ExonRegion	0	5.73	5.34	0.93	0.00	0.00	0.00
101	ER12e	ExonRegion	0	6.46	3.30	2.00	1.28	1.43	0.78
102	E12_Ac	KnownBoundary	0	8.80	5.85	0.00	0.00	3.66	0.00
103	ER12f	ExonRegion	0	99.09	63.47	54.95	21.70	225.76	83.52
104	E12d_E13a	KnownJunction	0	104.42	89.88	41.78	21.37	338.10	154.73
105	ER13a	ExonRegion	0	137.45	81.89	62.06	24.55	289.00	125.73
106	E13a_E14b	KnownJunction	1	216.44	120.93	118.52	38.71	986.09	335.83
107	ER14a	ExonRegion	0	3.41	2.15	0.45	1.81	5.51	2.62
108	E14_Ab	KnownBoundary	0	6.75	0.00	0.00	0.00	4.83	5.12
109	ER14b	ExonRegion	0	148.51	122.68	56.87	40.49	549.80	195.94
110	E14_Da	KnownBoundary	1	70.56	29.59	26.47	28.71	488.68	177.74
111	E14a_E15a	KnownJunction	0	81.83	92.52	10.82	0.00	494.50	265.72
112	ER14c	ExonRegion	0	66.03	35.76	36.27	18.87	283.91	147.14
113	E14b_E15a	KnownJunction	0	85.26	46.18	44.74	11.64	553.60	363.28
114	E15_Aa	NovelBoundary	0	9.52	3.21	5.98	0.00	64.42	93.28
115	ER15a	ExonRegion	0	129.80	116.05	56.02	36.74	424.69	476.37
116	E15_Da	KnownBoundary	0	175.35	114.80	30.46	18.92	491.75	341.37
117	ER15b	ExonRegion	0	180.74	102.94	88.65	25.48	599.00	346.07
118	E15_Db	KnownBoundary	1	209.39	79.81	95.75	37.30	323.62	99.32
119	ER15c	ExonRegion	0	235.99	110.84	78.70	30.59	204.89	64.42
120	E15_Dc	KnownBoundary	1	294.53	149.67	63.30	30.07	538.03	164.30
121	ER15d	ExonRegion	0	293.12	179.93	102.02	45.01	374.51	150.16
122	E15_Dd	KnownBoundary	0	182.70	201.75	46.28	30.39	879.38	607.51
123	ER15e	ExonRegion	0	202.36	172.66	32.71	24.31	455.19	274.63
124	E15_De	KnownBoundary	0	234.09	220.14	41.95	39.15	1039.53	748.47
125	ER15f	ExonRegion	0	177.16	154.70	19.23	15.24	814.50	469.08
126	E15_Df	KnownBoundary	0	212.95	158.16	10.87	0.00	2156.46	1027.63
127	ER15g	ExonRegion	0	117.91	113.74	17.85	10.80	620.83	465.80
128	E15_Dg	KnownBoundary	0	28.56	15.97	16.96	9.03	66.01	33.75
129	ER15h	ExonRegion	0	52.20	45.32	7.81	6.20	83.31	51.40
130	ER15i	ExonRegion	0	0.00	1.72	0.00	1.34	12.34	23.62