Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	RAPGEF5	Gene	0	66.78	73.48	90.85	72.52	56.37	76.46
2	405243	Transcript	0	0.67	0.27	9.85	5.07	0.00	0.12
3	382013	Transcript	0	0	0	0	0	0	0
4	344041	Transcript	0	1.32	4.16	13.31	23.97	4.52	44.89
5	497668	Transcript	0	0.27	0.00	0.82	0.27	0.00	0.00
6	471484	Transcript	0	0.00	0.00	4.08	0.70	0.28	0.00
7	475788	Transcript	0	1.81	4.59	9.95	7.13	0.00	0.00
8	420196	Transcript	0	0.76	0.00	10.75	8.79	4.45	4.74
9	458533	Transcript	0	0.00	0.00	1.70	0.00	0.00	0.36
10	401957	Transcript	0	16.21	25.64	47.83	72.46	20.48	14.94
11	451559	Transcript	0	2.77	0.00	0.00	7.94	0.00	29.47
12	425852	Transcript	0	0	0	0	0	0	0
13	258735	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
14	468825	Transcript	0	1.06	2.07	9.03	10.00	0.53	0.02
15	488366	Transcript	0	2.11	1.25	6.08	5.60	0.36	0.00
16	IG34_AR2	ActiveIntergenicRegion	0	2.11	6.23	0.00	0.00	3.62	5.55
17	IG34_AR1	ActiveIntergenicRegion	0	1.44	9.98	0.00	0.00	4.38	3.97
18	ER1a	ExonRegion	0	0.00	0.00	1.79	0.00	0.00	0.00
19	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
20	E1_Ac	KnownBoundary	0	0.00	0.00	6.03	0.00	0.00	0.00
21	ER1b	ExonRegion	0	0.00	0.00	4.35	0.00	0.00	0.00
22	ER1c	ExonRegion	0	0.00	0.00	11.22	0.16	1.79	0.02
23	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
24	E1a_E4a	KnownJunction	1	0.00	0.00	26.70	0.00	9.41	0.00
25	ER2a	ExonRegion	0	0.53	0.00	1.64	0.54	0.00	0.00
26	ER3a	ExonRegion	0	0.00	0.00	8.16	1.40	0.55	0.00
27	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	I3_AR1	ActiveIntronRegion	1	34.89	2.46	6.32	0.59	279.15	74.35
29	E4_Aa	NovelBoundary	1	9.64	2.92	32.85	0.00	21.56	5.21
30	ER4a	ExonRegion	0	0.50	0.00	91.54	37.97	5.57	4.65
31	E4_Da	NovelBoundary	1	3.68	0.00	6.55	2.94	33.71	0.00
32	E4a_E5a	KnownJunction	0	5.36	0.00	171.29	87.16	15.98	33.58
33	ER5a	ExonRegion	0	4.99	4.80	177.11	83.39	2.91	11.21
34	E5a_E6a	KnownJunction	0	3.74	2.70	156.83	65.63	4.91	17.38
35	I5_AR1	ActiveIntronRegion	0	3.64	0.72	11.54	2.65	58.41	21.37
36	ER6a	ExonRegion	0	5.54	9.52	152.88	73.35	4.02	3.87
37	E6a_E7a	KnownJunction	0	3.68	11.76	211.59	75.80	20.64	11.50
38	ER7a	ExonRegion	0	10.52	24.22	241.11	117.60	6.76	12.23
39	E7_Da	KnownBoundary	0	18.56	35.10	322.48	159.91	3.58	17.04
40	ER7b	ExonRegion	0	8.11	17.83	258.31	133.06	3.73	6.70
41	E7b_E8a	KnownJunction	0	15.49	16.99	176.30	71.23	13.48	17.13
42	ER8a	ExonRegion	0	14.34	10.67	172.31	66.43	2.64	4.14
43	E8a_E9a	KnownJunction	0	9.94	15.92	138.22	47.74	0.00	0.00
44	I8_AR1	ActiveIntronRegion	0	17.35	4.46	13.12	1.50	22.63	11.24
45	ER9a	ExonRegion	0	10.60	15.01	160.46	67.26	2.40	1.06
46	E9a_E10a	KnownJunction	0	17.35	9.11	182.45	92.27	7.74	3.95
47	I9_AR3	ActiveIntronRegion	1	3.54	1.12	19.31	0.00	1.69	0.91
48	ER10a	ExonRegion	1	12.24	7.80	172.10	60.26	2.86	3.78
49	E10a_E11b	KnownJunction	1	14.22	0.00	204.36	46.27	5.16	4.87
50	ER11a	ExonRegion	0	0.76	0.00	10.75	8.79	4.45	4.74
51	E11_Ab	KnownBoundary	0	0.00	0.00	11.78	13.43	14.32	11.17
52	ER11b	ExonRegion	1	10.29	5.83	186.94	65.70	4.86	8.84
53	E11a_E13a	KnownJunction	1	3.31	3.37	128.94	31.75	0.00	19.39
54	I11_AR3	ActiveIntronRegion	0	11.04	4.04	9.80	3.33	61.89	27.17
55	ER12a	ExonRegion	0	0.00	0.00	3.40	0.00	0.00	0.73
56	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
57	ER13a	ExonRegion	1	8.50	4.68	97.34	27.26	2.51	7.96
58	E13a_E14b	KnownJunction	0	0.00	0.00	2.85	2.56	0.00	0.00
59	E13a_E14e	KnownJunction	0	17.47	12.66	86.41	34.96	10.15	24.43
60	ER14a	ExonRegion	0	2.41	2.56	4.07	5.78	0.00	0.42
61	E14_Ab	KnownBoundary	0	0.00	6.19	3.07	11.36	0.00	0.00
62	ER14b	ExonRegion	0	0.00	4.03	14.29	25.07	0.00	4.15
63	E14_Ac	KnownBoundary	0	0.00	0.00	18.33	29.85	0.00	10.07
64	ER14c	ExonRegion	0	7.16	12.70	42.36	71.89	0.00	12.51
65	E14_Da	KnownBoundary	1	13.74	30.20	54.36	107.28	0.00	49.45
66	E14_Ad	KnownBoundary	1	6.27	21.65	37.34	58.45	4.49	140.38
67	ER14d	ExonRegion	1	9.97	28.94	59.71	101.62	1.50	40.47
68	ER14e	ExonRegion	1	5.17	31.03	49.70	82.28	2.04	44.21
69	E14_Ae	KnownBoundary	1	3.25	50.17	81.23	110.00	9.16	124.00
70	ER14f	ExonRegion	1	14.11	33.05	96.33	131.09	8.46	144.37
71	E14_Db	KnownBoundary	0	0.00	0.00	0.00	16.09	0.00	0.00
72	E14b_E15a	KnownJunction	0	3.43	5.06	10.36	7.83	0.00	4.79
73	E14b_E16a	KnownJunction	1	9.22	35.94	67.80	127.29	14.73	177.65
74	ER14g	ExonRegion	0	1.35	0.53	17.91	10.14	0.00	0.24
75	I14	Intron	0	2.10	0.00	20.41	7.06	0.26	0.00
76	I14_SR1	SilentIntronRegion	0	2.12	0.00	20.56	7.10	0.26	0.00
77	E15_Aa	NovelBoundary	0	3.37	0.00	53.00	17.51	3.83	0.00
78	ER15a	ExonRegion	0	2.32	6.94	14.29	17.57	1.21	7.29
79	E15_Da	KnownBoundary	0	0.00	10.46	5.86	9.68	0.00	0.00
80	E15a_E16a	KnownJunction	1	2.77	0.00	0.00	7.94	0.00	29.47
81	ER15b	ExonRegion	0	1.81	4.59	9.95	7.13	0.00	0.00
82	I15_SR1	SilentIntronRegion	0	4.59	3.29	23.42	16.63	1.53	1.12
83	I15_AR1	ActiveIntronRegion	0	2.82	1.06	3.69	4.76	9.22	22.52
84	I15_AR2	ActiveIntronRegion	0	1.04	0.00	15.70	9.42	15.84	15.62
85	I15_SR3	SilentIntronRegion	0	2.41	2.25	16.94	14.63	4.76	7.78
86	I15_AR3	ActiveIntronRegion	0	9.99	6.64	19.66	11.12	0.48	0.00
87	I15_AR4	ActiveIntronRegion	0	1.51	1.84	15.97	16.98	0.00	0.00
88	I15_AR6	ActiveIntronRegion	1	0.87	0.72	17.59	16.08	2.15	16.37
89	I15_SR6	SilentIntronRegion	0	2.24	2.08	18.28	13.42	2.04	4.46
90	I15_AR8	ActiveIntronRegion	0	2.09	0.00	30.50	24.46	1.14	1.70
91	ER16a	ExonRegion	1	15.08	36.36	82.07	170.33	14.27	198.45
92	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
93	E16a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
94	E16b_E18b	KnownJunction	1	10.06	27.67	104.80	163.55	49.94	658.22
95	ER16b	ExonRegion	1	12.67	29.78	99.94	167.31	28.93	345.56
96	E17a_E18b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
97	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
98	ER18a	ExonRegion	0	2.64	8.31	26.61	47.93	9.04	89.78
99	ER18b	ExonRegion	1	17.64	37.81	178.52	242.82	31.64	396.78
100	E18a_E19a	KnownJunction	1	15.73	33.80	90.68	127.34	50.36	755.78
101	ER19a	ExonRegion	1	8.25	47.89	269.61	184.08	21.46	256.56
102	E19_Da	NovelBoundary	0	0.00	0.00	47.31	18.76	16.56	0.00
103	E19a_E20a	KnownJunction	1	21.39	62.99	505.61	219.78	34.29	467.30
104	E20b_E21a	KnownJunction	0	31.63	18.28	77.59	95.37	13.73	4.79
105	ER20a	ExonRegion	1	26.30	46.84	367.94	194.47	12.00	148.27
106	ER20b	ExonRegion	0	28.85	36.24	226.18	154.87	5.42	3.09
107	ER21a	ExonRegion	0	23.06	42.73	150.21	154.78	3.73	6.98
108	E21_Da	NovelBoundary	0	3.07	12.94	36.32	6.20	9.16	8.56
109	E21a_E22a	KnownJunction	1	12.05	58.16	201.00	152.68	4.66	9.40
110	I21	Intron	0	2.26	1.86	25.83	16.19	8.48	5.55
111	I21_AR1	ActiveIntronRegion	0	7.57	2.37	26.71	17.25	2.46	1.73
112	I21_SR1	SilentIntronRegion	0	3.09	2.37	20.03	14.79	6.18	4.34
113	I21_AR2	ActiveIntronRegion	0	3.61	2.46	26.45	17.22	5.56	9.30
114	I21_SR2	SilentIntronRegion	0	0.42	1.52	25.98	15.76	11.08	5.62
115	E22_Aa	NovelBoundary	1	3.74	0.00	9.51	11.91	64.09	3.44
116	ER22a	ExonRegion	1	15.44	52.77	318.92	173.32	10.02	6.56
117	E22_Da	KnownBoundary	1	18.02	51.75	402.24	155.72	38.54	8.90
118	ER22b	ExonRegion	1	17.01	36.70	281.22	145.47	32.49	13.68
119	E22_Db	KnownBoundary	0	12.83	22.05	92.11	100.81	78.99	45.34
120	E22b_E25c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
121	ER22c	ExonRegion	0	22.74	42.68	115.23	117.37	27.90	15.98
122	E22_Dc	NovelBoundary	0	0.00	0.00	22.49	6.74	44.36	13.94
123	E22c_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
124	E22c_E23b	KnownJunction	0	30.01	48.71	91.59	139.14	40.95	29.47
125	I22	Intron	0	3.93	2.03	15.42	12.44	55.58	32.21
126	I22_SR1	SilentIntronRegion	0	3.93	2.04	15.43	12.45	55.62	32.23
127	E23_Aa	NovelBoundary	0	3.13	0.00	6.09	3.32	43.70	14.02
128	E23_Ab	NovelBoundary	0	0.00	3.15	5.01	11.64	69.92	47.35
129	ER23a	ExonRegion	0	4.83	5.64	14.90	17.23	16.79	5.02
130	ER23b	ExonRegion	0	27.95	54.08	82.76	130.50	45.83	26.18
131	E23_Da	NovelBoundary	1	31.94	4.72	17.19	17.67	138.42	111.49
132	E23a_E24a	KnownJunction	1	19.52	73.57	114.14	114.29	0.00	8.82
133	ER24a	ExonRegion	1	20.27	61.90	79.80	127.84	0.84	4.56
134	E24a_E25b	KnownJunction	0	24.22	51.35	71.78	113.26	4.25	4.79
135	ER25a	ExonRegion	0	0.33	1.20	7.05	3.64	0.04	0.04
136	E25_Ab	KnownBoundary	0	0.00	0.00	28.24	2.72	0.00	0.00
137	ER25b	ExonRegion	1	17.22	51.23	83.36	92.39	1.29	2.37
138	E25_Ac	KnownBoundary	0	23.98	35.83	77.48	96.24	4.16	5.21
139	ER25c	ExonRegion	0	22.56	55.44	120.92	122.18	0.46	1.72
140	E25a_E26a	KnownJunction	1	16.03	77.17	151.88	132.51	0.00	4.79
141	ER26a	ExonRegion	1	20.32	73.19	133.07	142.51	0.00	4.76
142	E26_Da	KnownBoundary	0	0.00	2.70	9.56	12.56	0.00	0.00
143	E26a_E27a	KnownJunction	1	3.31	74.58	82.66	64.70	0.00	5.04
144	ER26b	ExonRegion	0	1.80	2.95	11.02	16.37	1.03	0.00
145	ER27a	ExonRegion	1	21.36	77.97	180.15	117.17	0.00	1.60
146	E27a_E28a	KnownJunction	1	36.94	100.62	315.42	184.00	0.00	4.28
147	ER28a	ExonRegion	1	31.67	81.91	247.63	207.60	0.00	2.85
148	E28_Ab	KnownBoundary	0	38.50	75.54	168.04	199.49	5.08	23.17
149	ER28b	ExonRegion	0	25.27	53.22	134.70	135.72	0.90	8.06
150	E28a_E29a	KnownJunction	0	25.07	45.33	130.59	88.68	4.00	20.07
151	I28_SR1	SilentIntronRegion	0	1.93	1.17	18.09	16.46	2.38	1.06
152	ER29a	ExonRegion	0	37.61	74.22	145.19	146.19	1.64	6.86
153	E29a_E30a	KnownJunction	1	42.72	113.00	175.73	205.80	0.00	3.95
154	I29	Intron	0	4.22	1.78	19.97	15.13	18.54	15.18
155	I29_SR1	SilentIntronRegion	0	4.48	1.92	20.93	15.55	20.04	16.33
156	ER30a	ExonRegion	0	27.45	65.95	108.15	171.63	0.00	1.85
157	E30a_E31a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
158	E30a_E32a	KnownJunction	0	31.69	38.98	90.40	134.14	0.00	0.00
159	ER31a	ExonRegion	0	4.22	2.49	12.17	11.20	0.72	0.00
160	I31	Intron	0	5.34	2.79	29.33	20.68	0.66	3.72
161	I31_SR1	SilentIntronRegion	0	5.34	2.79	29.35	20.69	0.66	3.72
162	E32_Aa	NovelBoundary	0	6.57	0.00	11.44	23.87	3.75	0.00
163	ER32a	ExonRegion	0	151.35	155.22	121.69	96.72	130.70	151.23
164	ER32b	ExonRegion	0	0.19	0.57	1.19	0.00	3.29	7.57
165	IG33_SR5	SilentIntergenicRegion	0	3.77	3.98	3.67	6.26	1.72	1.09
166	IG33_AR4	ActiveIntergenicRegion	0	3.53	2.58	3.86	5.34	5.41	2.05