Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MLLT4	Gene	0	39.71	32.14	38.13	30.13	46.78	45.38
2	366809	Transcript	0	0	0	0	0	0	0
3	344191	Transcript	0	0	0	0	0	0	0
4	392108	Transcript	0	22.40	18.92	12.82	10.49	52.25	37.51
5	366806	Transcript	0	0	0	0	0	0	0
6	400822	Transcript	0	0	0	0	0	0	0
7	392112	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	341575	Transcript	0	0	0	0	0	0	0
9	351017	Transcript	0	0	0	0	0	0	0
10	400824	Transcript	0	0	0	0	0	0	0
11	400825	Transcript	0	0	0	0	0	0	0
12	366805	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.12
13	423229	Transcript	0	0.71	0.82	11.42	8.28	0.47	0.21
14	447894	Transcript	0	0	0	0	0	0	0
15	466024	Transcript	0	5.24	21.15	13.49	8.99	0.00	0.00
16	497596	Transcript	0	4.33	0.65	3.38	0.67	7.93	8.38
17	476946	Transcript	0	0	0	0	0	0	0
18	485634	Transcript	0	2.32	5.06	3.45	4.25	0.00	0.00
19	486649	Transcript	0	3.71	3.28	9.58	5.68	0.64	0.00
20	ER1a	ExonRegion	0	0.31	3.77	1.77	0.26	7.15	4.84
21	E1_Ab	KnownBoundary	0	20.25	12.26	9.45	5.65	29.55	45.00
22	ER1b	ExonRegion	0	9.73	13.96	11.62	7.26	26.02	48.33
23	E1_Ac	KnownBoundary	0	20.25	17.38	24.76	12.72	108.54	159.69
24	ER1c	ExonRegion	0	12.29	16.00	18.42	10.30	54.38	91.08
25	E1a_E4a	KnownJunction	0	8.38	16.76	14.40	8.65	105.21	127.53
26	E1a_E5b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	13.77
27	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
28	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.24
29	ER4a	ExonRegion	0	56.82	65.54	60.69	32.64	191.30	284.88
30	E4a_E5a	KnownJunction	1	30.85	40.67	21.12	11.80	141.92	410.04
31	E4a_E5b	KnownJunction	0	55.01	28.07	9.45	21.26	188.11	394.01
32	ER5a	ExonRegion	1	95.01	46.23	41.82	25.31	95.37	306.84
33	ER5b	ExonRegion	1	174.05	109.05	110.10	75.01	180.70	537.43
34	E5_Da	NovelBoundary	0	2.77	7.59	7.29	12.40	0.00	0.00
35	E5a_E6a	KnownJunction	0	113.94	109.96	52.14	42.30	335.52	729.58
36	E5a_E6b	KnownJunction	0	62.12	55.57	42.24	27.40	154.90	226.01
37	E5a_E7a	NovelJunction	1	3.74	0.00	2.56	18.76	0.00	0.00
38	ER6a	ExonRegion	1	108.21	90.89	50.51	54.39	246.34	537.78
39	ER6b	ExonRegion	1	226.32	142.12	107.25	112.30	105.24	220.31
40	E6a_E7a	KnownJunction	0	183.18	147.19	90.91	83.25	4.49	19.81
41	ER7a	ExonRegion	1	144.93	111.52	87.60	85.09	4.78	25.06
42	ER7b	ExonRegion	0	129.79	106.46	100.90	89.68	26.33	35.47
43	E7_Db	NovelBoundary	0	0.00	0.00	2.96	0.00	407.19	238.44
44	E7b_E8a	KnownJunction	0	86.83	94.94	90.51	81.45	22.81	56.92
45	E8_Aa	NovelBoundary	1	0.00	0.00	0.00	19.90	0.00	0.00
46	ER8a	ExonRegion	1	71.82	74.21	76.13	80.57	10.02	36.33
47	E8_Ab	KnownBoundary	1	98.22	94.83	193.72	138.27	13.57	88.32
48	ER8b	ExonRegion	1	83.46	79.06	152.74	113.16	10.35	29.77
49	E8_Da	NovelBoundary	1	0.00	0.00	3.53	3.37	0.00	27.54
50	E8a_E9a	KnownJunction	0	89.36	51.30	121.76	85.96	23.31	37.44
51	I8_AR1	ActiveIntronRegion	0	1.05	0.32	0.00	0.33	16.71	8.15
52	I8_AR2	ActiveIntronRegion	0	0.13	0.00	1.20	0.89	9.60	7.35
53	I8_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	2.15	66.78	33.94
54	ER9a	ExonRegion	0	51.69	59.41	76.18	69.06	8.68	13.83
55	E9a_E10a	KnownJunction	0	41.40	40.22	84.59	67.48	0.00	4.03
56	E9a_E25a	NovelJunction	1	129.79	46.18	31.59	31.16	301.40	236.51
57	ER9b	ExonRegion	0	36.60	46.74	74.23	61.04	3.62	9.26
58	I9	Intron	0	1.43	0.51	7.37	7.84	0.22	0.00
59	I9_AR3	ActiveIntronRegion	0	2.12	1.04	9.78	9.13	0.45	0.00
60	E10_Aa	NovelBoundary	0	0.00	3.49	6.38	10.00	0.00	0.00
61	ER10a	ExonRegion	0	55.50	60.67	99.77	80.26	4.00	3.28
62	E10_Da	NovelBoundary	0	0.00	2.53	21.29	2.83	0.00	0.00
63	E10a_E11a	KnownJunction	0	6.21	8.89	31.31	29.20	0.00	0.00
64	E10a_E12a	KnownJunction	1	9.52	29.98	12.92	44.53	0.00	0.00
65	ER11a	ExonRegion	0	11.07	12.93	47.80	21.97	0.48	0.00
66	E11a_E12a	KnownJunction	0	16.81	12.88	48.79	15.77	0.00	0.00
67	I11_AR1	ActiveIntronRegion	0	0.51	0.00	14.14	2.11	1.43	0.00
68	I11_AR2	ActiveIntronRegion	0	0.48	0.95	2.49	4.57	34.04	21.69
69	E12_Aa	NovelBoundary	0	0.00	0.00	10.59	9.52	0.00	0.00
70	ER12a	ExonRegion	0	32.60	49.56	58.89	66.78	1.71	2.53
71	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
72	ER13a	ExonRegion	0	26.51	39.27	77.33	68.63	1.24	5.05
73	E13a_E14a	KnownJunction	0	26.93	34.98	83.40	87.11	5.16	10.33
74	ER14a	ExonRegion	0	23.04	24.49	53.57	54.07	0.90	1.77
75	E14a_E15a	KnownJunction	0	20.25	14.74	63.07	41.76	0.00	0.00
76	I14_AR1	ActiveIntronRegion	1	0.62	0.04	3.54	2.73	3.92	17.65
77	ER15a	ExonRegion	0	17.10	28.75	85.84	62.26	0.47	0.00
78	E15_Da	NovelBoundary	0	11.03	11.92	21.75	5.55	0.00	0.00
79	E15a_E16a	KnownJunction	0	11.03	28.63	111.40	70.20	9.16	0.00
80	I15	Intron	0	0.37	0.58	10.25	6.38	0.12	0.00
81	I15_SR2	SilentIntronRegion	0	0.10	0.20	13.85	8.18	0.00	0.00
82	E16_Aa	NovelBoundary	0	0.00	5.62	9.79	10.55	0.00	0.00
83	ER16a	ExonRegion	0	15.77	20.68	100.15	95.13	1.31	0.00
84	E16a_E17a	KnownJunction	0	29.65	26.15	70.59	77.86	0.00	0.00
85	ER17a	ExonRegion	1	13.29	39.74	98.37	85.01	0.00	0.17
86	E17_Ab	KnownBoundary	1	5.66	43.98	98.77	59.81	0.00	0.00
87	ER17b	ExonRegion	0	8.85	22.42	92.87	66.57	1.53	0.86
88	E17_Da	KnownBoundary	0	0.00	3.49	16.00	11.64	4.49	0.00
89	E17a_E19a	KnownJunction	1	0.00	3.09	45.54	5.87	0.00	0.00
90	ER17c	ExonRegion	0	0.71	0.82	11.42	8.28	0.47	0.21
91	E17_Db	NovelBoundary	0	0.00	0.00	39.39	8.54	0.00	0.00
92	I17	Intron	0	0.66	1.30	18.15	14.48	0.00	0.00
93	I17_AR1	ActiveIntronRegion	0	0.77	1.88	21.77	19.29	0.00	0.00
94	I17_SR2	SilentIntronRegion	0	0.00	0.00	14.47	3.60	0.00	0.00
95	E18a_E19a	KnownJunction	0	5.97	25.87	12.69	11.53	0.00	0.00
96	ER18a	ExonRegion	0	4.52	16.42	14.28	6.46	0.00	0.00
97	I18	Intron	0	0.65	0.64	14.87	7.70	0.00	0.00
98	I18_SR1	SilentIntronRegion	0	0.82	0.81	14.10	7.48	0.00	0.00
99	I18_AR1	ActiveIntronRegion	0	0.00	0.00	17.93	8.64	0.00	0.00
100	E19_Aa	NovelBoundary	0	0.00	0.00	31.48	14.30	0.00	0.00
101	ER19a	ExonRegion	1	6.54	23.31	103.34	49.50	0.00	0.57
102	E19_Da	NovelBoundary	0	0.00	0.00	19.24	15.17	0.00	0.00
103	E19a_E20a	KnownJunction	1	6.27	29.87	70.82	39.80	0.00	5.21
104	ER20a	ExonRegion	0	9.33	15.70	59.92	28.35	0.00	0.60
105	E20a_E21a	KnownJunction	0	13.20	32.06	77.13	27.08	0.00	0.00
106	ER21a	ExonRegion	1	11.51	39.97	63.57	40.47	1.25	0.66
107	E21_Da	KnownBoundary	1	16.57	46.63	75.77	44.97	4.99	3.86
108	ER21b	ExonRegion	0	10.58	18.13	42.12	24.06	1.69	0.50
109	E21b_E22a	KnownJunction	0	19.04	39.03	63.02	53.67	3.50	0.00
110	E22_Aa	NovelBoundary	0	0.00	0.00	2.96	13.92	0.00	0.00
111	ER22a	ExonRegion	0	16.89	19.07	67.26	64.39	3.68	0.00
112	E22a_E23a	KnownJunction	0	18.02	37.97	100.36	95.53	7.99	0.00
113	ER23a	ExonRegion	0	16.57	33.92	92.57	88.89	0.00	0.00
114	E23_Ab	KnownBoundary	0	21.21	33.58	99.16	73.46	0.00	0.00
115	ER23b	ExonRegion	0	16.93	21.70	44.00	40.45	4.42	1.83
116	E23_Da	NovelBoundary	0	3.37	9.67	48.96	54.16	0.00	0.00
117	E23a_E24a	KnownJunction	0	20.19	27.56	59.43	34.31	0.00	0.00
118	I23	Intron	0	2.08	1.72	14.02	9.00	42.41	17.12
119	I23_SR1	SilentIntronRegion	0	0.83	0.00	11.50	5.50	1.63	0.00
120	I23_AR1	ActiveIntronRegion	0	2.84	1.18	12.95	6.26	3.63	0.59
121	I23_SR2	SilentIntronRegion	0	2.97	2.21	14.08	15.81	41.34	10.66
122	I23_AR2	ActiveIntronRegion	0	2.69	2.48	18.88	11.76	189.39	86.18
123	I23_SR3	SilentIntronRegion	0	0.64	1.95	13.33	4.61	0.57	0.58
124	I23_AR4	ActiveIntronRegion	0	3.75	2.55	12.20	3.78	1.53	3.24
125	E24_Aa	NovelBoundary	0	3.43	0.00	19.98	12.34	0.00	4.70
126	ER24a	ExonRegion	0	24.02	31.96	38.06	27.09	5.70	7.64
127	E24_Da	KnownBoundary	0	2.83	0.00	0.00	0.00	0.00	13.60
128	E24a_E26a	KnownJunction	0	26.81	51.24	38.25	41.92	5.16	5.21
129	E24_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	10.32	0.00
130	E24b_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
131	ER24b	ExonRegion	0	4.22	0.00	0.00	0.00	4.97	11.11
132	ER24c	ExonRegion	0	4.33	0.65	3.38	0.67	7.93	8.38
133	I24_AR1	ActiveIntronRegion	0	7.97	0.00	6.19	5.70	3.14	0.71
134	E25a_E26b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
135	ER25a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
136	ER26a	ExonRegion	0	31.67	43.04	66.42	49.55	3.10	2.91
137	ER26b	ExonRegion	0	30.59	29.74	70.93	52.48	2.37	0.65
138	E26a_E27a	KnownJunction	0	30.85	35.88	44.46	48.39	0.00	0.00
139	I26_AR1	ActiveIntronRegion	0	3.19	0.71	7.29	6.51	172.74	117.96
140	I26_AR6	ActiveIntronRegion	0	2.11	0.00	4.35	7.10	0.00	0.00
141	ER27a	ExonRegion	0	26.94	37.00	39.42	42.95	0.00	0.24
142	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
143	E27b_E28a	KnownJunction	0	40.37	33.07	43.60	60.14	0.00	0.00
144	ER27b	ExonRegion	0	26.74	33.24	43.45	43.08	0.00	0.00
145	ER28a	ExonRegion	0	23.85	20.27	69.05	59.39	0.00	4.55
146	E28a_E29a	KnownJunction	0	12.65	2.64	48.96	43.06	0.00	5.21
147	ER29a	ExonRegion	0	28.21	18.79	67.88	33.25	0.00	1.01
148	E29a_E30a	KnownJunction	1	29.89	0.00	74.12	39.69	0.00	4.87
149	ER30a	ExonRegion	0	33.84	22.95	69.35	61.84	0.56	0.47
150	E30_Da	NovelBoundary	0	0.00	0.00	14.12	0.00	0.00	0.00
151	E30a_E31a	KnownJunction	0	20.67	34.93	47.99	29.36	3.91	0.00
152	E31_Aa	NovelBoundary	0	7.47	3.49	3.42	16.31	0.00	0.00
153	ER31a	ExonRegion	1	21.76	49.86	52.33	58.07	1.75	0.00
154	E31_Da	NovelBoundary	0	3.49	0.00	16.57	20.99	0.00	0.00
155	E31a_E32a	KnownJunction	0	27.84	37.97	76.28	104.94	0.00	0.00
156	I31	Intron	0	3.23	1.36	22.30	11.29	0.00	0.00
157	I31_SR1	SilentIntronRegion	0	1.60	0.00	6.07	7.73	0.00	0.00
158	I31_AR1	ActiveIntronRegion	0	3.77	1.80	27.59	12.50	0.00	0.00
159	E32_Aa	NovelBoundary	0	7.47	21.54	29.94	14.84	0.00	0.00
160	ER32a	ExonRegion	0	31.82	47.52	75.56	66.80	0.77	0.00
161	E32a_E33a	KnownJunction	0	40.01	47.47	87.10	56.60	0.00	0.00
162	ER33a	ExonRegion	0	23.01	26.20	35.78	44.51	1.12	0.00
163	E33_Da	KnownBoundary	1	0.00	0.00	0.00	12.89	0.00	0.00
164	E33a_E34a	KnownJunction	0	3.62	2.87	16.22	9.46	0.00	0.00
165	E33a_E34b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
166	E33a_E35a	KnownJunction	1	13.02	44.38	3.19	15.71	0.00	0.00
167	E33a_E35b	KnownJunction	0	6.81	17.38	7.80	11.85	0.00	0.00
168	ER33b	ExonRegion	1	14.58	59.06	30.93	56.22	1.64	0.00
169	ER33c	ExonRegion	0	0.00	0.00	2.38	2.47	3.23	0.00
170	ER34a	ExonRegion	0	1.06	5.19	14.66	14.54	0.00	0.00
171	ER34b	ExonRegion	0	2.24	8.70	15.82	11.04	0.00	0.00
172	E34a_E35a	KnownJunction	0	5.78	10.29	12.81	3.21	5.16	0.00
173	I34_AR2	ActiveIntronRegion	0	3.68	0.56	7.40	6.18	9.70	5.79
174	I34_AR3	ActiveIntronRegion	0	5.91	0.00	13.04	12.93	47.01	22.03
175	I34_AR4	ActiveIntronRegion	0	1.95	0.00	6.76	7.34	44.20	20.71
176	I34_AR5	ActiveIntronRegion	0	2.11	3.84	0.00	6.46	43.25	25.35
177	I34_SR2	SilentIntronRegion	1	2.11	4.16	0.00	6.46	30.74	24.07
178	I34_AR6	ActiveIntronRegion	0	2.11	4.16	0.00	5.65	24.41	20.83
179	I34_AR9	ActiveIntronRegion	1	0.00	0.00	0.00	12.52	0.00	0.00
180	I34_AR10	ActiveIntronRegion	1	0.00	0.00	0.00	10.77	0.00	0.00
181	ER35a	ExonRegion	1	10.86	56.39	17.69	24.93	1.29	0.00
182	ER35b	ExonRegion	1	21.61	48.77	35.46	34.77	3.77	0.64
183	E35_Da	KnownBoundary	0	15.31	29.70	15.54	20.39	8.82	5.21
184	E35a_E36a	KnownJunction	0	0.00	11.31	11.21	2.72	0.00	0.00
185	ER35c	ExonRegion	0	16.15	22.81	23.44	14.62	8.62	2.03
186	E35_Db	KnownBoundary	0	9.94	9.06	28.80	8.32	16.56	4.87
187	E35_Dc	KnownBoundary	1	14.52	37.07	41.10	15.33	19.89	9.40
188	ER35d	ExonRegion	0	15.00	24.86	41.43	15.60	12.72	5.62
189	ER35e	ExonRegion	0	37.99	20.47	17.83	9.13	104.51	75.03
190	E35_Dd	NovelBoundary	0	10.30	3.49	0.00	6.14	287.74	198.89
191	I35_SR1	SilentIntronRegion	0	1.84	4.42	12.84	5.72	0.06	0.00
192	I35_AR2	ActiveIntronRegion	0	4.22	2.08	12.10	6.46	0.00	0.00
193	E36_Aa	NovelBoundary	0	0.00	2.31	5.12	11.04	0.00	0.00
194	ER36a	ExonRegion	0	3.66	5.70	10.15	3.91	0.00	0.00
195	E36_Da	KnownBoundary	0	16.39	9.34	22.31	2.94	0.00	0.00
196	E36a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
197	ER36b	ExonRegion	0	6.56	3.08	5.89	5.29	0.00	0.00
198	E36_Ab	KnownBoundary	1	6.51	11.59	0.00	14.52	0.00	0.00
199	ER36c	ExonRegion	0	6.99	20.93	7.27	9.86	1.21	0.00
200	E36_Db	KnownBoundary	0	9.52	15.24	6.15	12.23	0.00	0.00
201	E36b_E38a	KnownJunction	0	3.37	8.55	13.55	6.74	0.00	0.00
202	ER36d	ExonRegion	0	4.64	10.11	6.89	8.50	0.00	0.00
203	E36c_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
204	I36	Intron	0	4.98	2.16	11.98	9.50	0.11	0.00
205	I36_AR1	ActiveIntronRegion	0	4.98	2.17	11.98	9.51	0.11	0.00
206	E37_Aa	NovelBoundary	0	9.34	13.72	6.09	8.05	0.00	0.00
207	ER37a	ExonRegion	0	7.43	6.57	19.16	11.37	1.27	0.00
208	E37_Da	NovelBoundary	0	8.98	3.49	20.04	14.08	10.32	0.00
209	E37a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
210	E38_Aa	NovelBoundary	1	3.74	23.96	14.74	19.14	5.16	0.00
211	ER38a	ExonRegion	0	8.42	16.72	26.76	14.78	3.23	1.98
212	E38a_E39a	KnownJunction	1	9.52	42.58	50.49	36.10	3.66	15.45
213	ER39a	ExonRegion	0	12.13	16.57	34.85	20.99	3.36	3.08
214	E39_Da	KnownBoundary	0	13.14	29.36	37.06	18.60	5.16	0.00
215	E39_Db	KnownBoundary	0	12.59	9.96	20.21	23.33	23.22	0.00
216	ER39b	ExonRegion	0	16.22	22.35	37.28	27.40	9.47	0.74
217	ER39c	ExonRegion	0	80.68	51.55	27.40	18.02	97.91	82.97
218	ER39d	ExonRegion	0	2.11	2.08	0.00	0.00	0.00	0.00