Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	KHDC1	Gene	0	16.65	5.47	6.58	2.20	18.07	8.50
2	474593	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	398508	Transcript	0	0	0	0	0	0	0
4	370384	Transcript	0	0	0	0	0	0	0
5	484801	Transcript	0	23.56	7.04	12.75	4.63	16.95	5.22
6	370385	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	424313	Transcript	0	0	0	0	0	0	0
8	423730	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	257765	Transcript	0	0	0	0	0	0	0
10	433730	Transcript	0	3.31	2.81	0.00	0.00	8.32	4.28
11	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	3.35	0.00	1.01	0.00	0.00	0.00
14	E2_Ab	KnownBoundary	0	6.03	0.00	3.07	0.00	0.00	0.00
15	ER2b	ExonRegion	0	10.23	4.19	13.40	2.76	2.90	0.96
16	E2_Ac	KnownBoundary	0	13.62	0.00	5.86	0.00	18.73	0.00
17	ER2c	ExonRegion	0	14.18	1.11	9.62	0.00	7.78	1.74
18	E2a_E3a	KnownJunction	1	26.93	0.00	3.36	0.00	12.90	0.00
19	Ix	Intron	0	10.30	3.83	3.24	1.61	8.10	5.29
20	Ix_AR6	ActiveIntronRegion	0	17.29	6.41	1.66	3.43	8.02	6.30
21	Ix_AR5	ActiveIntronRegion	0	11.31	5.32	3.63	1.54	9.44	3.27
22	Ix_AR1	ActiveIntronRegion	0	23.43	10.03	8.39	1.56	31.84	21.89
23	E3_Aa	NovelBoundary	0	25.73	19.07	32.90	18.81	29.63	24.60
24	ER3a	ExonRegion	0	17.28	6.23	2.32	0.00	8.11	2.07
25	E3_Da	NovelBoundary	0	183.06	182.35	97.34	55.95	0.00	18.72
26	E3a_E4a	KnownJunction	0	6.57	9.79	0.00	0.00	9.41	9.24
27	E3a_E6a	KnownJunction	0	7.47	0.00	0.00	0.00	4.49	0.00
28	Ix	Intron	0	11.29	4.83	6.06	3.00	4.20	0.86
29	Ix_SR1	SilentIntronRegion	0	13.28	5.68	7.13	3.53	4.94	1.01
30	Ix	Intron	0	15.17	6.46	5.91	3.07	17.79	5.63
31	Ix_AR1	ActiveIntronRegion	0	16.54	6.51	6.79	0.00	0.00	0.00
32	Ix_SR1	SilentIntronRegion	0	15.08	6.46	5.84	3.35	19.43	6.15
33	Ix	Intron	0	9.91	2.34	5.69	3.50	5.87	3.34
34	Ix_SR2	SilentIntronRegion	0	9.67	2.58	4.45	2.38	4.88	3.22
35	Ix_AR1	ActiveIntronRegion	0	10.68	1.59	9.69	7.11	9.10	3.73
36	Ix	Intron	0	15.28	1.50	4.73	5.46	2.62	0.67
37	Ix_SR1	SilentIntronRegion	0	15.43	1.52	4.77	5.48	2.64	0.68
38	E4_Aa	NovelBoundary	1	30.19	2.64	26.53	7.99	4.66	0.00
39	ER4a	ExonRegion	0	24.73	5.52	7.82	7.53	7.85	1.40
40	E4_Da	KnownBoundary	0	26.27	6.97	19.24	3.37	14.23	0.00
41	E4a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER4b	ExonRegion	0	17.73	5.58	7.28	2.31	6.32	3.86
43	E4_Ab	KnownBoundary	0	354.06	220.76	113.11	68.95	1064.50	1736.14
44	ER4c	ExonRegion	0	16.24	3.09	4.21	3.36	16.37	8.14
45	E4_Db	KnownBoundary	0	18.50	12.43	0.00	3.15	0.00	14.44
46	ER4d	ExonRegion	0	29.39	8.50	18.22	6.95	27.59	6.58
47	E4_Dc	NovelBoundary	0	14.28	5.57	9.17	6.20	7.99	0.00
48	Ix	Intron	0	12.13	3.77	4.23	2.68	11.29	5.84
49	Ix_SR2	SilentIntronRegion	0	10.91	3.10	5.99	2.23	7.89	3.19
50	Ix_AR3	ActiveIntronRegion	0	23.23	5.06	2.06	2.56	38.55	25.73
51	Ix_SR1	SilentIntronRegion	0	17.92	7.98	7.58	2.97	16.65	6.33
52	Ix_AR2	ActiveIntronRegion	0	23.72	3.06	6.13	5.58	1.81	2.50
53	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
54	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
55	ER5c	ExonRegion	0	1.24	2.37	0.00	0.00	1.89	0.48
56	E5_Da	KnownBoundary	0	10.48	2.87	0.00	0.00	17.73	5.21
57	E5a_E6a	KnownJunction	0	3.31	2.81	0.00	0.00	8.32	4.28
58	ER5d	ExonRegion	0	12.98	5.47	2.96	1.52	13.68	8.06
59	E5_Db	NovelBoundary	0	6.63	0.00	13.15	2.61	0.00	9.40
60	E5b_E6a	KnownJunction	0	20.07	0.00	0.00	3.37	46.20	29.97
61	ER6a	ExonRegion	0	20.69	10.09	4.03	2.93	28.41	9.97
62	E6a_E7a	KnownJunction	0	46.64	22.05	9.05	2.83	47.69	30.14
63	ER7a	ExonRegion	0	41.81	11.09	2.78	0.25	36.08	9.62
64	E7a_E8a	KnownJunction	0	60.32	34.53	0.00	0.00	65.84	23.26
65	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
66	ER8a	ExonRegion	0	48.09	19.57	3.61	0.00	92.45	62.70
67	ER8b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
68	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
69	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
70	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
71	E10_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E10a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E10_Ab	KnownBoundary	1	32.72	10.01	3.02	0.00	51.02	10.41
74	ER10b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
75	ER10c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
76	E10b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
77	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
78	E11_Da	NovelBoundary	0	22.36	10.46	0.00	0.00	45.28	26.03
79	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
80	E12_Aa	NovelBoundary	0	259.22	212.61	111.06	52.42	438.57	339.86
81	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
82	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
83	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
84	E13_Da	NovelBoundary	0	19.58	6.30	0.00	0.00	12.74	4.53
85	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
86	E13_Db	NovelBoundary	0	7.23	0.00	0.00	0.00	22.31	0.00
87	E13b_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
88	ER13b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
89	ER14a	ExonRegion	0	0.42	0.00	0.00	0.00	0.00	0.37