Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	CUL9	Gene	0	53.48	24.37	15.90	9.15	18.73	6.72
2	354351	Transcript	0	0	0	0	0	0	0
3	451399	Transcript	0	5.84	2.28	6.57	1.87	1.01	1.34
4	252050	Transcript	0	118.64	40.05	17.93	10.82	47.69	10.41
5	354495	Transcript	0	0	0	0	0	0	0
6	372647	Transcript	0	9.95	6.54	4.64	1.95	3.43	5.27
7	ER1a	ExonRegion	0	6.59	0.00	3.85	1.11	0.00	0.00
8	E1a_E2b	KnownJunction	0	18.02	0.00	6.60	3.37	0.00	0.00
9	E2_Aa	NovelBoundary	0	37.96	15.75	9.73	4.95	5.16	31.06
10	ER2a	ExonRegion	0	9.95	6.54	4.64	1.95	3.43	5.27
11	E2_Ab	KnownBoundary	0	3.25	0.00	3.02	3.10	0.00	0.00
12	ER2b	ExonRegion	0	33.26	17.38	10.24	7.12	0.00	0.70
13	E2a_E3a	KnownJunction	0	23.86	6.02	20.32	8.75	0.00	0.00
14	E3_Aa	NovelBoundary	0	9.70	0.00	2.90	11.26	0.00	0.00
15	ER3a	ExonRegion	0	37.36	19.98	25.51	14.45	0.00	0.00
16	E3_Da	NovelBoundary	0	10.06	0.00	0.00	9.08	0.00	0.00
17	E3a_E4a	KnownJunction	0	41.52	43.70	43.89	13.81	0.00	0.00
18	E4_Aa	NovelBoundary	0	3.62	0.00	7.06	6.09	0.00	0.00
19	ER4a	ExonRegion	0	34.98	19.89	23.08	13.13	1.19	0.01
20	E4a_E5a	KnownJunction	1	33.86	2.92	3.36	6.63	4.58	0.00
21	E4a_E6a	NovelJunction	0	6.63	10.35	0.00	0.00	0.00	0.00
22	E4a_E7a	KnownJunction	0	3.13	2.47	3.13	0.00	0.00	0.00
23	ER5a	ExonRegion	1	20.79	3.61	3.31	3.94	0.69	1.23
24	E5a_E6a	KnownJunction	0	20.97	2.81	0.00	3.26	0.00	4.11
25	ER6a	ExonRegion	0	28.56	10.93	12.02	6.62	0.00	0.55
26	E6a_E7a	KnownJunction	1	42.06	3.09	24.88	15.01	0.00	0.00
27	ER7a	ExonRegion	0	44.65	18.93	29.40	12.53	0.33	0.00
28	E7_Da	KnownBoundary	0	10.00	3.04	12.18	0.00	0.00	0.00
29	E7a_E7b	KnownJunction	0	35.01	12.04	5.29	3.21	0.00	0.00
30	ER7b	ExonRegion	0	7.73	3.73	7.60	0.00	0.00	0.79
31	E7_Db	KnownBoundary	0	6.15	10.46	3.42	0.00	0.00	5.04
32	ER7c	ExonRegion	0	11.57	3.91	9.50	3.06	0.82	0.68
33	E7_Ab	KnownBoundary	0	12.59	5.29	0.00	5.98	0.00	0.00
34	ER7d	ExonRegion	0	31.87	17.53	13.71	9.68	2.04	0.40
35	E7_Dc	KnownBoundary	0	2.65	0.00	3.36	0.00	3.50	5.21
36	E7c_E8a	KnownJunction	0	39.83	30.82	12.81	10.93	0.00	0.00
37	ER7e	ExonRegion	0	0.11	0.65	3.65	0.67	1.21	2.00
38	ER8a	ExonRegion	0	42.16	15.60	13.58	10.33	0.00	0.68
39	E8_Da	NovelBoundary	0	6.21	3.49	0.00	0.00	0.00	10.07
40	E8a_E9a	KnownJunction	0	69.96	47.86	28.06	12.07	0.00	0.00
41	ER9a	ExonRegion	0	64.55	26.00	36.19	23.77	0.00	0.00
42	E9_Da	NovelBoundary	0	31.94	11.70	21.01	6.31	0.00	0.00
43	E9a_E10a	KnownJunction	1	65.98	10.86	48.90	21.10	0.00	0.00
44	I9	Intron	0	14.82	7.92	12.20	8.21	0.00	0.00
45	I9_AR1	ActiveIntronRegion	0	14.90	7.96	12.26	8.25	0.00	0.00
46	E10_Aa	NovelBoundary	0	30.37	15.75	30.57	27.68	0.00	0.00
47	ER10a	ExonRegion	0	45.98	23.10	41.08	21.23	0.63	1.14
48	E10_Da	NovelBoundary	0	13.14	0.00	6.15	9.41	0.00	0.00
49	E10a_E11a	KnownJunction	0	30.61	22.84	25.62	5.65	0.00	4.11
50	ER11a	ExonRegion	0	28.96	20.33	18.82	6.21	0.00	1.27
51	E11a_E12a	KnownJunction	0	45.25	25.76	11.78	5.11	0.00	0.00
52	ER12a	ExonRegion	0	49.18	23.83	27.30	10.79	0.00	0.00
53	E12a_E13a	KnownJunction	0	103.64	28.80	44.69	29.36	0.00	0.00
54	E13_Aa	NovelBoundary	0	10.06	0.00	9.62	2.50	0.00	0.00
55	ER13a	ExonRegion	0	68.91	27.80	53.42	29.05	0.00	0.00
56	E13a_E14a	KnownJunction	0	143.77	62.88	118.35	67.64	0.00	0.00
57	E14_Aa	NovelBoundary	0	6.99	6.97	23.40	6.31	0.00	0.00
58	ER14a	ExonRegion	0	71.53	29.66	42.11	23.77	0.40	0.00
59	E14a_E15a	KnownJunction	0	67.85	24.41	18.61	6.74	4.25	0.00
60	ER15a	ExonRegion	0	59.14	32.58	21.37	8.48	0.59	0.00
61	E15a_E16a	KnownJunction	0	44.95	50.23	6.83	0.00	0.00	0.00
62	ER16a	ExonRegion	0	60.97	35.48	13.90	6.20	0.00	0.00
63	E16a_E17a	KnownJunction	0	102.74	29.25	21.12	12.34	0.00	0.00
64	ER17a	ExonRegion	0	54.87	27.96	11.77	3.75	0.00	0.00
65	E17a_E18a	KnownJunction	1	54.23	5.46	8.99	2.50	0.00	0.00
66	ER18a	ExonRegion	0	57.20	15.96	8.02	4.30	1.56	0.00
67	E18a_E19a	KnownJunction	0	55.74	18.22	6.15	2.45	0.00	0.00
68	ER19a	ExonRegion	0	32.84	12.23	5.01	5.84	2.17	0.00
69	E19_Da	NovelBoundary	1	49.35	3.09	13.66	0.00	0.00	0.00
70	E19a_E20a	KnownJunction	0	23.26	6.24	3.30	4.78	0.00	0.00
71	I19	Intron	0	27.61	6.79	5.77	7.04	0.00	0.00
72	I19_AR1	ActiveIntronRegion	0	27.76	6.83	5.80	7.08	0.00	0.00
73	E20_Aa	NovelBoundary	0	22.23	6.19	3.30	9.03	0.00	0.00
74	ER20a	ExonRegion	0	49.53	17.69	11.10	8.56	0.67	0.00
75	E20a_E21a	KnownJunction	0	13.56	5.23	5.69	0.00	0.00	0.00
76	I20_AR2	ActiveIntronRegion	0	8.45	6.23	0.00	0.00	0.00	0.00
77	ER21a	ExonRegion	0	24.84	16.09	10.35	9.40	1.07	0.00
78	E21a_E22a	KnownJunction	0	25.13	14.17	12.52	11.20	3.50	0.00
79	ER22a	ExonRegion	0	29.52	15.03	9.33	6.87	0.11	0.00
80	E22_Da	NovelBoundary	1	20.55	0.00	2.79	0.00	0.00	0.00
81	E22a_E23a	KnownJunction	1	2.65	25.09	12.69	0.00	0.00	0.00
82	I22	Intron	0	16.37	4.30	0.00	2.23	0.00	0.00
83	I22_AR1	ActiveIntronRegion	0	16.58	4.36	0.00	2.26	0.00	0.00
84	E23_Aa	NovelBoundary	0	25.85	2.36	11.78	5.93	0.00	0.00
85	ER23a	ExonRegion	0	33.45	22.14	9.00	3.08	1.94	0.00
86	E23a_E24a	KnownJunction	0	35.61	23.29	14.80	5.22	5.16	0.00
87	ER24a	ExonRegion	0	27.23	10.71	13.82	3.12	1.63	0.00
88	E24a_E25a	KnownJunction	0	12.59	5.34	19.35	2.56	0.00	0.00
89	ER25a	ExonRegion	0	43.13	17.83	15.81	8.48	2.89	0.00
90	E25_Da	NovelBoundary	0	12.23	11.76	7.06	0.00	0.00	0.00
91	E25a_E26a	KnownJunction	0	50.55	13.67	13.83	0.00	0.00	0.00
92	I25_AR1	ActiveIntronRegion	0	12.16	0.96	3.50	1.49	0.42	0.00
93	E26_Aa	NovelBoundary	1	22.90	0.00	3.53	0.00	0.00	0.00
94	ER26a	ExonRegion	0	43.62	17.53	8.59	4.22	1.80	0.00
95	E26a_E27a	KnownJunction	1	61.94	12.94	23.40	3.37	0.00	0.00
96	ER27a	ExonRegion	0	44.84	15.84	14.56	4.82	0.10	0.00
97	E27a_E28a	KnownJunction	0	32.24	22.84	8.94	6.14	0.00	0.00
98	E28_Aa	NovelBoundary	0	10.61	16.31	0.00	3.21	0.00	0.00
99	ER28a	ExonRegion	0	55.63	24.37	16.03	10.95	0.00	0.00
100	E28a_E29a	KnownJunction	0	101.05	24.69	23.51	18.27	0.00	0.00
101	ER29a	ExonRegion	0	59.58	21.58	15.65	10.68	0.00	0.00
102	E29a_E30a	KnownJunction	0	64.78	27.90	15.20	5.76	0.00	0.00
103	ER30a	ExonRegion	0	87.71	36.26	15.87	15.25	1.38	0.75
104	E30a_E31a	KnownJunction	0	185.05	65.53	44.17	24.30	9.82	3.53
105	ER31a	ExonRegion	0	110.36	48.86	14.39	15.54	0.55	2.05
106	E31a_E32a	KnownJunction	0	87.61	44.94	14.12	9.79	0.00	10.33
107	ER32a	ExonRegion	0	118.17	38.08	13.84	7.99	4.95	2.11
108	E32_Da	NovelBoundary	0	30.79	16.93	0.00	0.00	0.00	0.00
109	E32a_E33a	KnownJunction	1	107.56	20.87	8.65	0.00	30.38	9.82
110	Ix	Intron	0	12.39	3.21	0.67	0.67	0.56	0.00
111	Ix_AR1	ActiveIntronRegion	0	12.49	3.24	0.68	0.67	0.56	0.00
112	E33_Aa	NovelBoundary	1	45.31	2.53	2.90	2.34	0.00	0.00
113	ER33a	ExonRegion	0	110.70	30.54	10.44	7.11	30.68	5.31
114	E33a_E34a	KnownJunction	1	164.44	39.43	6.77	7.88	49.03	22.58
115	Ix	Intron	0	24.75	4.78	1.36	0.45	3.41	0.00
116	Ix_SR1	SilentIntronRegion	0	26.46	2.99	0.00	0.56	1.44	0.00
117	Ix_AR1	ActiveIntronRegion	0	23.30	6.66	2.77	0.35	5.44	0.00
118	E34_Aa	NovelBoundary	1	31.69	3.49	2.50	2.45	16.06	0.00
119	ER34a	ExonRegion	0	124.48	52.91	15.25	10.91	53.70	13.49
120	E34_Da	NovelBoundary	0	11.51	8.44	3.07	0.00	0.00	0.00
121	E34a_E35a	KnownJunction	0	110.39	46.40	9.39	3.21	120.28	15.45
122	E35_Aa	NovelBoundary	0	15.24	19.24	7.06	0.00	0.00	0.00
123	ER35a	ExonRegion	0	149.34	63.21	9.91	8.39	83.14	15.75
124	E35a_E36a	KnownJunction	0	256.87	132.23	19.58	11.15	185.20	39.21
125	ER36a	ExonRegion	0	128.45	76.76	15.19	11.30	111.88	25.27
126	E36a_E37a	KnownJunction	0	118.64	40.05	17.93	10.82	47.69	10.41
127	E36b_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
128	ER36b	ExonRegion	0	2.82	0.00	0.00	0.00	3.01	0.62
129	E37_Aa	NovelBoundary	0	6.03	0.00	7.06	0.00	14.07	3.61
130	ER37a	ExonRegion	0	158.53	77.43	14.32	11.19	97.36	33.67
131	E37_Da	NovelBoundary	0	33.08	31.27	3.53	0.00	5.16	0.00
132	E37a_E38a	KnownJunction	0	191.31	73.12	26.19	22.46	261.78	62.88
133	E38_Aa	NovelBoundary	0	24.83	26.04	0.00	3.21	11.90	17.13
134	ER38a	ExonRegion	0	141.51	71.97	11.88	6.88	128.26	33.82
135	E38_Da	NovelBoundary	0	6.09	15.69	0.00	6.09	4.08	0.00
136	E38a_E39a	KnownJunction	0	246.93	141.34	25.22	17.45	335.36	105.95
137	ER39a	ExonRegion	0	198.47	99.05	22.17	19.85	177.16	72.35
138	E39a_E40a	KnownJunction	0	230.48	89.37	11.78	24.52	279.59	119.39
139	ER40a	ExonRegion	0	128.48	67.42	7.41	5.11	266.98	101.69
140	ER40b	ExonRegion	0	0.00	2.08	0.00	0.00	0.00	0.00