Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MUTED	Gene	0	5.16	4.70	3.15	3.45	10.16	7.94
2	397456	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	397457	Transcript	0	8.97	4.84	5.64	1.81	6.91	8.37
4	244777	Transcript	0	0.28	0.00	0.86	0.85	0.00	0.00
5	439343	Transcript	0	0	0	0	0	0	0
6	358251	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	486432	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
8	475998	Transcript	0	0.00	0.00	0.00	0.30	0.00	0.00
9	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
10	E1_Ac	KnownBoundary	0	2.95	3.49	3.24	6.31	0.00	0.00
11	ER1b	ExonRegion	0	1.60	0.00	2.40	1.86	0.00	0.00
12	ER1c	ExonRegion	0	4.39	0.88	5.00	1.98	0.00	0.00
13	E1a_E2a	KnownJunction	0	0.00	3.49	3.30	3.37	0.00	0.00
14	ER2a	ExonRegion	0	3.18	7.26	7.90	12.72	0.00	0.00
15	E2a_E4a	KnownJunction	0	10.36	9.00	11.95	20.17	0.00	0.00
16	E3_Aa	NovelBoundary	0	1416.68	1249.43	359.66	224.62	6348.03	3054.34
17	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
18	E3_Da	NovelBoundary	0	35.19	24.30	15.65	10.87	169.13	169.00
19	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4a	ExonRegion	0	3.33	8.63	10.41	12.61	1.74	1.59
21	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
22	E4a_E7a	KnownJunction	0	3.31	12.71	12.92	0.00	4.66	5.21
23	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
24	ER6a	ExonRegion	0	0.83	0.00	2.57	2.54	0.00	0.00
25	E6_Da	NovelBoundary	0	2.89	0.00	3.53	7.72	0.00	0.00
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	ER7a	ExonRegion	0	9.55	6.66	14.03	6.13	0.83	3.45
28	E7_Da	NovelBoundary	0	0.00	0.00	9.51	0.00	0.00	0.00
29	E7a_E9a	KnownJunction	0	15.06	5.74	15.48	13.38	3.50	8.06
30	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER8a	ExonRegion	0	0.00	0.00	0.00	0.60	0.00	0.00
32	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	E9_Aa	NovelBoundary	0	6.33	0.00	11.78	17.83	0.00	0.00
34	ER9a	ExonRegion	0	6.06	16.97	18.47	22.11	3.12	2.90
35	E9_Da	KnownBoundary	0	13.32	10.86	13.78	21.80	17.65	14.19
36	ER9b	ExonRegion	0	7.93	8.78	7.81	7.08	8.35	5.58
37	E9_Db	KnownBoundary	0	6.69	8.72	6.94	2.39	10.32	14.61
38	ER9c	ExonRegion	0	17.30	13.99	4.18	6.99	46.36	35.35
39	E9_Dc	KnownBoundary	0	0.00	16.42	10.13	3.37	28.05	14.61
40	ER9d	ExonRegion	0	8.97	4.84	5.64	1.81	6.91	8.37
41	I9_AR3	ActiveIntronRegion	0	3.49	2.11	1.38	0.96	20.46	7.77
42	I9_AR6	ActiveIntronRegion	0	0.00	0.00	1.06	5.57	2.83	0.87
43	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
44	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
45	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
46	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
47	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
48	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
49	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
50	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
51	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
52	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
53	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
54	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
55	Ix_AR1	ActiveIntronRegion	0	1.64	2.09	1.17	5.49	0.00	0.00
56	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
57	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
58	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
59	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
60	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
61	ER18b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00