Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	ATXN1	Gene	0	46.99	19.57	53.05	25.19	119.29	55.39
2	498374	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	436367	Transcript	0	0	0	0	0	0	0
4	450222	Transcript	0	0	0	0	0	0	0
5	479680	Transcript	0	2.23	0.00	6.20	0.64	0.00	0.00
6	467008	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	492857	Transcript	0	0	0	0	0	0	0
8	473388	Transcript	0	5.62	1.69	16.62	7.36	0.66	0.17
9	483954	Transcript	0	4.25	0.81	5.64	2.24	9.27	2.65
10	244769	Transcript	0	0	0	0	0	0	0
11	495178	Transcript	0	5.18	1.82	6.72	3.90	2.11	0.22
12	483591	Transcript	0	4.02	2.56	4.26	2.29	2.83	3.48
13	379065	Transcript	0	0	0	0	0	0	0
14	405101	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1b	ExonRegion	0	0.19	0.00	0.00	1.76	0.00	0.00
17	E1_Ag	KnownBoundary	0	6.09	9.67	8.37	9.19	0.00	0.00
18	ER1c	ExonRegion	0	2.11	0.00	0.00	2.15	0.00	0.00
19	ER1d	ExonRegion	0	2.11	0.00	1.00	3.48	0.00	0.00
20	ER1e	ExonRegion	0	3.52	0.00	2.17	4.31	0.00	0.00
21	ER1f	ExonRegion	0	4.22	0.00	2.17	4.31	0.00	0.00
22	ER1g	ExonRegion	0	12.63	8.11	22.47	12.38	0.03	0.00
23	E1a_E2a	KnownJunction	0	0.00	0.00	3.53	3.37	0.00	0.00
24	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
26	E1a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E1a_E7a	NovelJunction	0	7.35	11.25	25.33	5.17	0.00	0.00
28	Ix	Intron	0	9.20	3.57	10.70	4.03	9.69	7.41
29	Ix_AR6	ActiveIntronRegion	0	15.76	8.31	4.92	1.44	97.14	71.82
30	Ix_SR4	SilentIntronRegion	0	34.13	19.74	1.09	0.00	0.00	0.00
31	Ix_AR5	ActiveIntronRegion	0	48.80	19.81	10.27	4.68	0.71	0.00
32	Ix_AR4	ActiveIntronRegion	0	4.59	1.63	12.67	4.16	9.95	13.20
33	Ix_SR2	SilentIntronRegion	0	2.26	0.65	12.49	4.39	0.06	0.26
34	Ix_AR3	ActiveIntronRegion	0	6.07	0.00	11.13	11.58	0.00	0.00
35	Ix_AR2	ActiveIntronRegion	0	8.45	0.00	10.03	13.26	0.00	0.00
36	Ix_SR1	SilentIntronRegion	0	0.22	0.00	16.84	6.94	0.00	0.00
37	E2_Aa	NovelBoundary	0	0.00	0.00	51.40	12.34	0.00	0.00
38	ER2a	ExonRegion	0	7.24	2.08	44.60	14.16	0.00	0.00
39	E2a_E3a	KnownJunction	0	20.55	2.98	97.51	32.30	0.00	0.00
40	Ix	Intron	0	0.26	0.00	8.70	7.32	0.44	0.00
41	Ix_SR1	SilentIntronRegion	0	0.26	0.00	8.73	7.35	0.44	0.00
42	ER3a	ExonRegion	0	22.86	8.83	106.51	35.71	1.18	0.00
43	E3_Ab	KnownBoundary	0	26.81	6.97	127.51	52.25	7.16	0.00
44	ER3b	ExonRegion	0	24.10	20.28	75.02	52.45	3.11	0.00
45	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
46	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
47	E3a_E7a	KnownJunction	0	26.03	45.56	50.83	39.75	0.00	0.00
48	ER3c	ExonRegion	0	2.23	0.00	6.20	0.64	0.00	0.00
49	Ix	Intron	0	6.92	2.02	12.36	6.36	16.67	7.40
50	Ix_SR4	SilentIntronRegion	0	4.82	0.00	14.03	3.63	0.34	0.74
51	Ix_SR3	SilentIntronRegion	0	9.14	2.84	13.30	7.64	33.77	14.20
52	Ix_AR2	ActiveIntronRegion	0	8.45	0.00	10.55	6.46	0.00	0.00
53	Ix_SR2	SilentIntronRegion	0	10.82	0.00	10.86	7.00	0.00	0.00
54	Ix_AR1	ActiveIntronRegion	0	7.42	1.56	14.90	7.90	0.00	0.00
55	ER4a	ExonRegion	0	4.15	4.08	5.64	2.84	0.00	0.00
56	E4_Da	NovelBoundary	0	2.65	0.00	2.90	9.68	0.00	0.00
57	E4a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
58	Ix	Intron	0	1.51	1.11	13.37	6.36	0.21	0.88
59	Ix_SR3	SilentIntronRegion	0	1.81	1.29	13.59	6.68	0.14	0.37
60	Ix_AR10	ActiveIntronRegion	0	0.00	1.12	11.54	7.84	0.00	0.00
61	Ix_AR9	ActiveIntronRegion	0	0.00	4.75	15.10	4.51	0.00	0.00
62	Ix_AR8	ActiveIntronRegion	0	0.00	0.00	19.81	9.76	0.00	0.00
63	Ix_AR7	ActiveIntronRegion	0	0.00	0.00	23.41	7.30	0.00	0.00
64	Ix_AR6	ActiveIntronRegion	0	0.00	4.16	21.73	6.46	0.00	0.00
65	Ix_AR5	ActiveIntronRegion	0	0.00	4.16	17.38	6.46	0.00	0.00
66	Ix_AR4	ActiveIntronRegion	0	0.00	4.16	12.44	6.46	0.00	0.00
67	Ix_AR2	ActiveIntronRegion	0	0.81	0.45	13.26	6.35	0.00	1.87
68	Ix_SR1	SilentIntronRegion	0	1.76	1.03	15.50	6.81	0.69	3.18
69	ER5a	ExonRegion	0	0.00	0.00	0.27	0.00	0.00	0.00
70	E5_Da	KnownBoundary	0	0.00	3.21	0.00	0.00	0.00	0.00
71	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E5_Db	KnownBoundary	0	0.00	0.00	8.71	0.00	0.00	0.00
73	ER5c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
74	E5_Dc	NovelBoundary	0	2.83	0.00	22.77	9.19	0.00	0.00
75	I5_AR1	ActiveIntronRegion	0	1.72	1.47	14.27	12.20	0.00	3.01
76	I5_SR1	SilentIntronRegion	0	0.00	0.72	21.86	9.68	0.00	0.00
77	I5_AR3	ActiveIntronRegion	0	0.57	0.00	27.02	10.41	0.36	0.00
78	I5_SR2	SilentIntronRegion	0	2.06	1.88	20.31	7.16	3.47	1.05
79	I5_SR3	SilentIntronRegion	0	11.81	3.33	15.61	8.83	17.17	2.71
80	I5_AR6	ActiveIntronRegion	0	43.54	25.79	12.34	5.72	254.42	82.35
81	I5_AR7	ActiveIntronRegion	0	28.71	8.96	3.66	2.03	0.00	0.00
82	I5_AR8	ActiveIntronRegion	0	42.60	13.83	13.52	6.49	0.31	0.00
83	I5_SR4	SilentIntronRegion	0	3.94	1.27	12.64	5.12	0.16	0.03
84	I5_SR5	SilentIntronRegion	0	3.57	1.74	10.76	4.58	5.26	2.35
85	I5_AR10	ActiveIntronRegion	0	22.61	9.66	9.97	5.67	25.34	8.95
86	I5_SR6	SilentIntronRegion	0	50.80	11.75	13.08	5.10	0.26	0.00
87	I5_AR11	ActiveIntronRegion	0	10.07	10.39	6.68	4.31	0.00	0.00
88	I5_AR12	ActiveIntronRegion	0	6.69	10.39	8.69	4.31	0.00	0.00
89	I5_AR14	ActiveIntronRegion	0	14.59	3.06	10.38	2.46	1.12	0.00
90	I5_AR15	ActiveIntronRegion	0	2.54	0.00	17.16	4.83	0.00	0.00
91	I5_AR18	ActiveIntronRegion	0	8.99	3.74	9.40	4.62	36.58	8.87
92	I5_AR19	ActiveIntronRegion	0	25.40	6.10	6.06	2.84	63.94	42.64
93	I5_AR20	ActiveIntronRegion	0	18.05	3.35	9.57	4.22	14.67	1.95
94	I5_SR11	SilentIntronRegion	0	23.29	3.85	7.15	4.97	24.20	9.68
95	I5_AR21	ActiveIntronRegion	0	30.24	15.22	4.92	5.00	114.79	45.27
96	I5_SR12	SilentIntronRegion	1	17.27	6.25	9.80	3.62	5.92	17.92
97	ER6a	ExonRegion	0	8.50	1.62	11.29	4.48	18.54	5.29
98	E6_Da	NovelBoundary	0	5.12	0.00	3.42	9.46	93.22	30.39
99	I6_SR1	SilentIntronRegion	0	2.87	1.31	10.77	3.56	11.58	4.71
100	I6_AR1	ActiveIntronRegion	0	2.06	3.05	6.28	2.04	24.39	10.38
101	I6_SR2	SilentIntronRegion	1	5.07	2.75	2.85	1.36	42.60	68.11
102	ER7a	ExonRegion	0	53.96	38.45	146.47	96.09	4.51	3.78
103	E7_Da	NovelBoundary	0	20.01	0.00	6.72	3.10	48.61	37.02
104	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
105	E7a_E9a	KnownJunction	0	75.26	61.31	161.78	102.17	4.66	5.04
106	I7_AR1	ActiveIntronRegion	0	5.99	1.36	10.91	0.94	14.21	31.12
107	I7_AR3	ActiveIntronRegion	0	4.49	0.10	7.46	5.32	0.00	0.00
108	I7_AR8	ActiveIntronRegion	0	0.70	2.56	13.76	5.86	0.00	0.42
109	E8_Aa	NovelBoundary	0	13.26	6.69	14.91	6.25	0.00	0.00
110	ER8a	ExonRegion	0	10.36	3.64	13.44	7.80	4.21	0.43
111	I8_AR2	ActiveIntronRegion	0	0.41	0.00	7.75	7.34	0.00	0.00
112	ER9a	ExonRegion	0	56.97	32.02	176.86	134.00	1.82	1.36
113	E9a_E10a	KnownJunction	0	55.56	31.38	141.29	58.07	7.82	5.04
114	I9_AR1	ActiveIntronRegion	0	0.58	0.00	6.94	5.13	0.00	0.00
115	I9_AR3	ActiveIntronRegion	0	2.81	1.65	9.75	8.62	0.00	0.00
116	I9_AR4	ActiveIntronRegion	0	4.22	0.00	5.87	5.60	0.00	0.00
117	I9_SR3	SilentIntronRegion	0	2.42	0.19	11.52	4.57	0.00	0.17
118	I9_AR14	ActiveIntronRegion	0	2.11	0.00	15.21	2.15	0.00	0.00
119	I9_AR15	ActiveIntronRegion	0	1.01	0.00	13.83	2.20	0.00	0.00
120	I9_AR22	ActiveIntronRegion	0	2.08	0.00	6.94	8.36	11.22	4.43
121	I9_SR11	SilentIntronRegion	0	1.03	0.00	4.50	2.35	21.30	15.18
122	I9_AR23	ActiveIntronRegion	0	1.95	0.00	5.64	4.66	20.62	28.51
123	I9_SR12	SilentIntronRegion	0	2.52	1.59	11.17	11.27	0.62	0.32
124	ER10a	ExonRegion	0	50.23	25.20	118.68	80.96	4.49	1.43
125	E10_Da	NovelBoundary	0	0.00	0.00	7.06	9.24	0.00	0.00
126	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
127	E10a_E11b	KnownJunction	0	79.30	26.77	159.79	126.80	7.57	4.03
128	ER11a	ExonRegion	0	28.50	15.58	67.35	54.93	2.71	1.85
129	ER11b	ExonRegion	0	59.90	35.14	142.55	84.80	2.82	2.84
130	E11_Da	KnownBoundary	0	3.01	0.00	6.60	5.65	0.00	0.00
131	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	3.37	4.33	0.00
132	E11a_E14a	KnownJunction	0	81.59	46.23	147.84	59.32	0.00	0.00
133	ER11c	ExonRegion	0	5.62	1.69	16.62	7.36	0.66	0.17
134	E11_Db	NovelBoundary	0	0.00	0.00	21.52	5.60	0.00	0.00
135	I11	Intron	0	4.50	2.07	12.12	5.47	2.82	2.16
136	I11_SR1	SilentIntronRegion	0	2.94	1.90	11.18	6.31	3.27	1.32
137	I11_AR1	ActiveIntronRegion	0	0.19	2.92	15.91	7.76	0.90	0.17
138	I11_SR2	SilentIntronRegion	0	5.08	1.27	13.14	4.97	22.52	7.69
139	I11_SR3	SilentIntronRegion	0	4.17	2.06	14.19	5.40	0.13	1.17
140	I11_AR4	ActiveIntronRegion	1	5.28	0.00	21.18	0.00	0.00	1.85
141	I11_SR4	SilentIntronRegion	0	8.45	2.86	23.63	4.71	0.00	1.85
142	I11_AR5	ActiveIntronRegion	0	5.77	2.47	15.71	7.36	0.46	0.07
143	I11_AR7	ActiveIntronRegion	1	2.45	0.63	5.30	4.02	1.82	20.23
144	I11_AR8	ActiveIntronRegion	0	3.73	0.00	13.63	4.88	3.05	0.00
145	I11_AR9	ActiveIntronRegion	0	0.00	0.00	20.05	5.30	3.62	0.00
146	I11_AR10	ActiveIntronRegion	0	1.69	0.00	25.35	16.66	3.86	0.00
147	I11_AR11	ActiveIntronRegion	0	2.11	0.00	27.74	19.39	5.42	0.00
148	I11_SR7	SilentIntronRegion	0	3.75	2.26	9.76	5.25	3.05	0.67
149	I11_AR12	ActiveIntronRegion	0	22.42	8.64	8.11	6.43	0.00	0.00
150	I11_SR8	SilentIntronRegion	0	8.37	2.73	11.00	5.07	3.07	3.41
151	I11_AR13	ActiveIntronRegion	0	1.23	2.63	5.54	2.64	10.68	13.44
152	E12_Aa	NovelBoundary	0	3.74	0.00	15.20	2.50	69.50	58.35
153	ER12a	ExonRegion	0	1.10	1.06	4.39	3.70	10.24	16.71
154	E12_Da	NovelBoundary	0	3.74	0.00	18.05	0.00	95.72	93.19
155	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
156	I12	Intron	1	12.11	2.98	13.24	1.54	27.21	112.81
157	I12_AR1	ActiveIntronRegion	1	12.23	3.01	13.37	1.56	27.46	113.84
158	E13_Aa	NovelBoundary	1	6.21	5.17	21.35	12.67	41.87	174.21
159	ER13a	ExonRegion	0	18.84	10.20	15.53	3.85	2.42	4.16
160	E13_Da	NovelBoundary	0	12.53	3.21	22.77	6.85	0.00	7.39
161	I13	Intron	0	4.49	1.98	11.01	5.03	10.49	5.59
162	I13_SR1	SilentIntronRegion	0	9.09	4.23	13.39	1.87	1.59	1.94
163	I13_AR1	ActiveIntronRegion	0	7.49	2.74	28.79	4.60	0.00	0.80
164	I13_AR2	ActiveIntronRegion	0	8.15	2.95	25.37	9.15	0.00	0.82
165	I13_SR2	SilentIntronRegion	0	3.17	5.52	38.50	15.40	0.00	7.26
166	I13_AR3	ActiveIntronRegion	0	2.74	4.37	21.43	13.04	1.93	5.17
167	I13_AR4	ActiveIntronRegion	0	9.17	0.88	17.84	7.59	3.71	1.57
168	I13_SR3	SilentIntronRegion	0	5.58	2.45	9.77	6.24	11.52	2.34
169	I13_AR5	ActiveIntronRegion	0	12.53	7.10	23.65	11.07	2.57	1.45
170	I13_AR6	ActiveIntronRegion	0	9.45	0.55	8.69	12.81	3.62	0.00
171	I13_SR4	SilentIntronRegion	0	1.94	2.00	16.76	10.98	1.78	2.06
172	I13_AR7	ActiveIntronRegion	0	0.90	3.15	19.76	13.26	0.55	0.07
173	I13_AR8	ActiveIntronRegion	0	0.17	3.39	13.21	4.48	1.81	1.85
174	I13_SR5	SilentIntronRegion	0	0.87	0.72	13.11	2.70	1.70	1.66
175	I13_AR9	ActiveIntronRegion	0	0.00	4.16	15.21	0.00	0.00	5.55
176	I13_AR10	ActiveIntronRegion	0	1.09	0.28	8.06	5.44	4.99	10.46
177	I13_AR11	ActiveIntronRegion	0	1.10	0.36	12.91	4.61	0.00	0.00
178	I13_SR7	SilentIntronRegion	0	2.49	0.56	13.54	5.96	0.73	0.74
179	I13_SR9	SilentIntronRegion	0	2.14	1.77	14.42	5.78	0.42	1.29
180	I13_AR14	ActiveIntronRegion	0	3.49	0.00	8.80	6.47	1.51	5.02
181	I13_AR17	ActiveIntronRegion	0	0.00	0.78	11.28	7.83	2.30	0.42
182	I13_SR11	SilentIntronRegion	0	2.88	1.70	16.17	7.25	2.86	2.10
183	I13_AR18	ActiveIntronRegion	0	12.60	8.25	10.95	4.83	0.00	0.00
184	I13_SR12	SilentIntronRegion	0	3.67	2.52	18.41	7.49	0.04	0.28
185	I13_AR19	ActiveIntronRegion	0	4.34	1.70	13.80	6.19	0.45	0.06
186	I13_AR20	ActiveIntronRegion	0	7.05	1.45	13.42	7.04	0.00	1.75
187	I13_SR13	SilentIntronRegion	0	9.52	2.51	11.11	4.57	26.01	7.00
188	I13_AR21	ActiveIntronRegion	0	45.92	17.77	18.13	4.58	246.26	93.51
189	I13_AR22	ActiveIntronRegion	0	53.57	34.23	12.93	7.58	714.43	364.27
190	I13_SR14	SilentIntronRegion	0	6.69	2.54	12.31	6.30	5.49	1.76
191	I13_AR24	ActiveIntronRegion	0	6.10	2.32	9.31	3.41	115.00	50.17
192	I13_SR15	SilentIntronRegion	0	3.82	1.20	11.65	4.16	0.43	1.09
193	I13_AR25	ActiveIntronRegion	0	3.26	0.90	19.84	10.01	0.00	0.00
194	I13_SR19	SilentIntronRegion	0	6.67	1.68	7.27	3.04	29.29	12.12
195	I13_AR33	ActiveIntronRegion	0	4.60	0.00	23.92	9.27	3.14	0.00
196	I13_AR34	ActiveIntronRegion	0	3.02	0.00	20.07	3.87	3.04	0.00
197	I13_SR21	SilentIntronRegion	0	2.11	0.00	19.55	4.31	1.81	0.00
198	I13_AR35	ActiveIntronRegion	0	2.11	0.00	18.03	4.31	0.90	0.00
199	I13_AR36	ActiveIntronRegion	0	2.11	0.00	15.21	2.87	0.00	0.00
200	I13_AR37	ActiveIntronRegion	0	2.80	2.91	18.63	11.14	0.00	0.00
201	I13_AR39	ActiveIntronRegion	1	6.33	12.12	4.35	5.39	5.42	16.97
202	I13_AR41	ActiveIntronRegion	1	10.73	3.44	4.52	1.07	18.61	39.54
203	ER14a	ExonRegion	0	138.23	80.89	214.50	157.39	1.07	0.00
204	E14_Ab	KnownBoundary	0	81.41	66.99	133.32	90.53	0.00	0.00
205	ER14b	ExonRegion	0	111.07	103.12	161.03	116.26	0.00	0.00
206	E14_Ac	KnownBoundary	0	151.66	120.87	158.31	115.71	3.91	0.00
207	ER14c	ExonRegion	0	74.26	49.22	51.37	40.77	0.30	0.15
208	E14a_E15a	KnownJunction	0	22.05	13.16	43.04	9.52	3.75	0.00
209	I14_AR2	ActiveIntronRegion	1	4.75	2.95	3.25	2.37	9.88	21.66
210	ER15a	ExonRegion	0	39.36	22.47	51.85	30.53	3.62	1.57
211	E15_Da	KnownBoundary	1	26.45	17.55	77.13	16.37	5.16	0.00
212	E15a_E15b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
213	ER15b	ExonRegion	0	46.14	19.31	68.75	30.22	16.96	11.16
214	E15_Db	KnownBoundary	0	60.62	24.64	48.22	28.00	41.95	27.71
215	ER15c	ExonRegion	0	20.28	9.31	77.60	30.58	38.59	29.67
216	E15_Ab	KnownBoundary	0	9.52	2.59	101.50	35.56	163.14	49.95
217	ER15d	ExonRegion	0	11.52	7.52	65.53	27.66	82.58	27.94
218	E15_Dc	KnownBoundary	0	6.27	0.00	20.78	6.52	221.74	69.85
219	ER15e	ExonRegion	0	167.79	50.55	92.06	33.20	663.84	289.23
220	IG33	Intergenic	0	7.07	2.91	2.20	0.62	15.96	4.95
221	IG33_AR1	ActiveIntergenicRegion	0	34.93	17.32	1.60	0.53	108.15	36.31