Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	NQO2	Gene	0	68.54	37.68	18.22	10.68	61.46	33.13
2	426637	Transcript	0	0.00	0.43	0.00	0.00	0.00	0.00
3	380472	Transcript	0	31.08	30.79	5.02	0.00	36.99	31.70
4	397717	Transcript	0	4.71	0.88	4.27	0.98	0.97	0.63
5	338130	Transcript	0	1.35	0.66	1.04	2.59	0.00	1.07
6	380441	Transcript	0	3.56	0.00	0.00	0.00	0.00	0.00
7	380455	Transcript	0	0	0	0	0	0	0
8	380454	Transcript	0	0	0	0	0	0	0
9	380430	Transcript	0	1.53	0.75	0.00	0.00	0.65	1.00
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E4a	NovelJunction	1	246.33	55.29	40.02	6.52	106.87	35.51
13	Ix	Intron	0	20.07	9.29	7.89	4.82	0.51	0.00
14	Ix_AR1	ActiveIntronRegion	0	20.14	9.32	7.92	4.83	0.51	0.00
15	ER2a	ExonRegion	0	18.41	17.43	2.99	0.00	11.89	8.82
16	E2a_E4a	KnownJunction	0	43.75	44.15	7.06	0.00	62.09	54.57
17	ER3a	ExonRegion	0	0.00	1.73	0.00	0.00	0.00	0.00
18	E3_Da	NovelBoundary	0	15.37	20.02	10.19	2.28	13.23	8.82
19	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4a	ExonRegion	0	28.13	39.90	5.62	2.64	41.89	41.61
21	E4_Da	NovelBoundary	0	23.80	18.45	8.82	2.56	18.31	4.45
22	E4a_E10a	KnownJunction	0	35.79	18.34	27.10	6.74	0.00	8.90
23	Ix_SR1	SilentIntronRegion	0	3.87	0.00	6.78	0.70	14.60	5.98
24	E5_Aa	NovelBoundary	0	3.31	0.00	12.07	0.00	0.00	0.00
25	ER5a	ExonRegion	0	10.88	2.64	9.85	0.72	2.92	1.89
26	E5_Ab	KnownBoundary	0	9.94	9.22	5.86	0.00	4.74	9.49
27	E5_Ac	KnownBoundary	0	0.00	3.49	3.53	6.69	0.00	0.00
28	E5_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
29	E5_Ae	KnownBoundary	0	18.50	2.76	6.32	3.26	18.06	5.04
30	ER5b	ExonRegion	0	15.34	7.06	13.32	4.31	9.28	5.55
31	ER5c	ExonRegion	0	16.89	7.01	13.04	5.12	11.98	5.55
32	ER5d	ExonRegion	1	26.60	6.23	15.21	6.46	11.57	4.07
33	ER5e	ExonRegion	1	48.41	12.82	28.03	11.97	20.06	8.72
34	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	3.78
35	E5a_E8a	KnownJunction	0	3.25	0.00	0.00	2.23	0.00	0.00
36	E5a_E9a	KnownJunction	0	3.56	0.00	0.00	0.00	0.00	0.00
37	E5a_E10a	KnownJunction	0	78.57	32.34	48.05	20.82	62.09	30.48
38	ER6a	ExonRegion	0	3.06	1.50	0.00	0.00	1.31	2.01
39	E6a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
40	ER7a	ExonRegion	0	5.42	2.66	4.16	4.14	0.00	0.48
41	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER8a	ExonRegion	0	1.12	0.02	0.99	1.67	0.00	1.15
43	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	6.20	0.00	0.00
44	E8a_E10a	KnownJunction	0	0.00	0.00	2.96	0.00	0.00	0.00
45	ER9a	ExonRegion	0	13.56	2.96	5.52	3.68	0.88	2.92
46	E9a_E10a	KnownJunction	0	8.98	0.00	6.43	3.37	0.00	4.20
47	ER10a	ExonRegion	0	132.60	57.49	49.59	31.49	64.44	24.13
48	E10a_E11a	KnownJunction	0	163.41	70.36	52.31	24.63	133.59	55.33
49	ER11a	ExonRegion	0	171.11	76.91	53.14	29.28	98.23	40.03
50	E11a_E12a	KnownJunction	1	185.65	51.80	41.67	22.78	242.88	72.87
51	ER12a	ExonRegion	0	163.04	58.52	36.93	26.57	146.15	42.58
52	ER12b	ExonRegion	0	187.31	94.08	37.45	30.90	131.33	50.85
53	E12_Db	NovelBoundary	1	33.98	0.00	3.53	0.00	0.00	0.00
54	E12b_E13a	KnownJunction	0	235.42	94.66	21.63	11.20	226.57	113.43
55	E12b_E14a	KnownJunction	0	14.10	0.00	0.00	0.00	19.23	5.04
56	ER13a	ExonRegion	0	171.20	98.39	36.13	30.42	144.31	50.23
57	E13a_E14a	KnownJunction	1	198.60	123.46	38.14	30.61	392.29	121.15
58	I13_AR2	ActiveIntronRegion	0	15.31	0.00	0.00	4.31	0.00	0.00
59	E14_Aa	NovelBoundary	0	10.24	12.37	6.26	8.54	0.00	0.00
60	ER14a	ExonRegion	0	198.51	106.63	25.43	24.56	150.91	61.53
61	E14_Da	NovelBoundary	1	51.70	2.87	33.87	17.45	0.00	0.00
62	E14a_E15a	KnownJunction	0	247.23	139.77	33.76	15.01	309.55	118.38
63	I14	Intron	0	16.16	6.62	16.98	5.84	3.65	1.87
64	I14_AR2	ActiveIntronRegion	0	13.88	3.20	14.31	5.23	3.22	0.48
65	I14_AR3	ActiveIntronRegion	0	22.96	10.76	22.50	6.97	5.15	4.07
66	E15_Aa	NovelBoundary	0	85.93	25.82	38.14	10.11	48.28	8.31
67	ER15a	ExonRegion	0	125.03	83.81	33.29	10.58	207.35	140.45
68	ER15b	ExonRegion	0	7.24	12.47	11.79	2.15	12.91	4.23