Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	NIPBL	Gene	0	26.02	22.64	59.77	62.19	36.95	47.64
2	448238	Transcript	1	14.52	12.01	7.69	8.60	41.94	21.93
3	282516	Transcript	0	41.18	18.59	12.12	3.61	65.08	65.12
4	ER1a	ExonRegion	0	1.28	0.55	9.40	2.29	0.68	0.20
5	E1a_E2a	KnownJunction	1	10.42	2.64	39.62	2.66	3.91	5.21
6	I1_AR3	ActiveIntronRegion	0	4.98	2.94	4.57	1.94	66.23	65.29
7	I1_AR12	ActiveIntronRegion	0	3.92	1.61	5.04	2.00	37.51	47.56
8	ER2a	ExonRegion	1	6.66	6.65	60.27	71.50	4.97	30.86
9	E2_Da	NovelBoundary	1	0.00	0.00	0.00	5.33	0.00	31.32
10	E2a_E3a	KnownJunction	0	9.04	14.85	54.25	78.68	4.25	12.51
11	E3_Aa	NovelBoundary	0	0.00	0.00	2.45	0.00	21.97	0.00
12	ER3a	ExonRegion	0	5.81	8.70	67.16	115.74	13.93	10.05
13	E3_Da	NovelBoundary	0	2.53	0.00	2.62	2.88	34.29	33.33
14	E3a_E4a	KnownJunction	0	3.19	12.82	81.52	164.26	0.00	13.60
15	I3_AR1	ActiveIntronRegion	0	0.49	0.00	4.15	6.16	15.36	9.90
16	ER4a	ExonRegion	1	7.87	31.73	126.07	205.68	4.84	10.28
17	E4a_E5a	KnownJunction	0	32.30	33.30	230.95	291.71	16.40	34.67
18	I4_SR1	SilentIntronRegion	0	3.35	2.81	2.60	2.36	64.91	59.64
19	E5_Aa	NovelBoundary	1	0.00	0.00	0.00	20.17	0.00	0.00
20	ER5a	ExonRegion	1	20.35	58.01	166.26	228.46	3.44	13.16
21	E5a_E6a	KnownJunction	0	2.95	19.46	65.64	100.97	11.82	37.61
22	ER6a	ExonRegion	1	20.29	37.68	122.30	165.92	6.01	29.97
23	E6a_E7a	KnownJunction	1	6.21	34.87	67.17	133.98	3.75	81.44
24	I6_AR1	ActiveIntronRegion	0	0.00	0.00	1.58	2.42	58.23	47.77
25	ER7a	ExonRegion	1	17.30	28.08	93.31	142.53	13.71	90.57
26	E7_Da	NovelBoundary	1	0.00	0.00	3.53	0.00	48.28	3.53
27	E7a_E8a	KnownJunction	1	36.33	21.15	149.14	179.81	22.39	486.95
28	E8_Aa	NovelBoundary	0	0.00	0.00	9.22	16.37	12.24	40.13
29	ER8a	ExonRegion	1	22.55	36.26	164.24	190.64	4.32	116.19
30	E8a_E9a	KnownJunction	1	15.67	16.65	132.75	202.21	4.25	93.11
31	E9_Aa	NovelBoundary	0	0.00	0.00	6.94	19.52	0.00	0.00
32	ER9a	ExonRegion	1	31.08	29.87	163.95	207.60	2.95	43.35
33	E9a_E10a	KnownJunction	0	12.71	0.00	22.20	23.76	5.16	13.10
34	ER10a	ExonRegion	0	23.45	22.04	99.49	110.62	33.97	67.63
35	E10_Da	NovelBoundary	0	0.00	0.00	12.47	19.95	0.00	0.00
36	E10a_E11a	KnownJunction	1	106.35	15.02	76.11	75.25	252.62	339.52
37	I10_SR2	SilentIntronRegion	0	4.86	1.98	5.99	2.93	12.42	7.34
38	I10_AR7	ActiveIntronRegion	0	6.98	2.08	9.02	13.42	0.00	0.00
39	I10_AR8	ActiveIntronRegion	0	4.43	4.16	12.06	14.00	0.00	0.00
40	I10_AR11	ActiveIntronRegion	0	7.62	5.34	8.07	2.31	4.65	0.00
41	E11_Aa	NovelBoundary	0	10.42	3.09	17.25	30.99	20.06	0.00
42	ER11a	ExonRegion	1	57.56	23.07	38.39	43.27	113.53	185.20
43	E11a_E12a	KnownJunction	1	87.43	25.82	37.51	29.96	197.93	599.79
44	I11_AR3	ActiveIntronRegion	0	19.57	4.86	11.55	4.41	16.17	9.98
45	I11_SR3	SilentIntronRegion	0	0.47	1.53	14.95	4.51	2.26	0.31
46	E12_Aa	NovelBoundary	0	9.64	10.29	15.14	0.00	4.08	28.55
47	ER12a	ExonRegion	1	43.24	30.79	27.63	24.63	54.40	202.33
48	E12a_E13a	KnownJunction	1	57.18	34.37	34.50	35.34	15.81	110.74
49	ER13a	ExonRegion	0	56.48	45.04	35.21	31.72	1.98	17.36
50	E13a_E14a	KnownJunction	0	49.47	46.23	35.69	19.03	0.00	4.95
51	ER14a	ExonRegion	0	22.57	13.07	22.79	16.44	0.00	3.13
52	E14a_E15a	KnownJunction	0	28.38	8.38	27.72	24.79	0.00	3.69
53	ER15a	ExonRegion	0	26.49	14.48	33.46	31.01	0.00	0.89
54	E15a_E16a	KnownJunction	0	10.06	2.47	35.12	21.04	0.00	4.79
55	ER16a	ExonRegion	1	16.09	2.94	32.74	24.49	0.00	0.55
56	E16a_E17a	KnownJunction	0	20.55	15.47	28.06	19.74	0.00	0.00
57	ER17a	ExonRegion	0	21.07	11.66	68.29	45.07	0.66	0.00
58	E17a_E18a	KnownJunction	1	49.41	3.49	110.89	54.64	0.00	0.00
59	ER18a	ExonRegion	0	13.21	5.15	67.46	51.46	1.87	0.79
60	E18a_E19a	KnownJunction	0	15.18	18.79	34.27	35.02	3.75	11.00
61	ER19a	ExonRegion	0	13.79	11.11	39.94	45.11	4.13	0.85
62	E19a_E20a	KnownJunction	0	24.58	2.76	51.97	60.79	13.32	3.53
63	ER20a	ExonRegion	0	9.76	13.08	58.74	46.11	4.53	9.73
64	E20_Da	NovelBoundary	0	3.13	0.00	3.53	3.37	22.81	0.00
65	E20a_E21a	KnownJunction	0	10.61	10.01	118.97	70.68	0.00	4.87
66	ER21a	ExonRegion	0	9.84	5.37	66.39	41.72	1.04	2.68
67	E21a_E22a	KnownJunction	0	7.47	15.64	103.43	82.16	0.00	0.00
68	E22_Aa	NovelBoundary	0	9.70	0.00	17.82	6.04	0.00	0.00
69	ER22a	ExonRegion	0	6.49	8.56	57.79	44.85	0.00	0.00
70	E22a_E23a	KnownJunction	0	10.18	0.00	23.68	12.07	0.00	0.00
71	ER23a	ExonRegion	0	10.16	7.58	27.98	24.51	0.00	0.00
72	E23a_E24a	KnownJunction	0	10.24	6.86	16.51	18.21	0.00	0.00
73	ER24a	ExonRegion	0	9.16	1.50	36.71	32.34	0.00	0.00
74	E24a_E25a	KnownJunction	0	19.70	5.96	83.62	38.93	0.00	0.00
75	ER25a	ExonRegion	0	10.98	2.49	84.80	52.35	1.53	1.56
76	E25a_E26a	KnownJunction	0	11.09	0.00	61.37	56.00	0.00	0.00
77	ER26a	ExonRegion	0	10.25	3.47	56.66	46.44	7.67	2.88
78	E26a_E27a	KnownJunction	0	0.00	10.24	13.43	26.97	0.00	5.12
79	ER27a	ExonRegion	0	2.23	5.06	39.97	23.45	1.33	7.26
80	E27a_E28a	KnownJunction	0	9.46	14.34	23.28	17.89	0.00	6.97
81	ER28a	ExonRegion	0	8.49	18.57	28.33	24.37	0.00	7.69
82	E28a_E29a	KnownJunction	0	10.97	18.67	19.87	31.86	0.00	13.18
83	ER29a	ExonRegion	0	9.25	8.44	66.00	51.42	0.00	3.70
84	E29a_E30a	KnownJunction	0	14.28	19.01	46.62	61.01	0.00	0.00
85	ER30a	ExonRegion	0	8.35	8.80	66.91	47.04	0.12	0.04
86	E30a_E31a	KnownJunction	0	9.46	13.95	57.95	39.58	0.00	0.00
87	E31_Aa	NovelBoundary	0	5.97	0.00	12.92	3.37	33.21	5.04
88	ER31a	ExonRegion	0	13.41	15.89	35.62	36.34	3.10	3.85
89	E31_Da	NovelBoundary	0	18.08	0.00	2.90	8.21	33.63	17.55
90	E31a_E32a	KnownJunction	0	9.46	30.26	27.21	41.60	4.83	9.15
91	I31_SR1	SilentIntronRegion	0	7.07	2.74	4.67	0.99	29.31	15.45
92	ER32a	ExonRegion	0	15.09	16.77	25.87	34.95	3.42	8.47
93	E32a_E33a	KnownJunction	0	22.60	3.21	33.81	40.73	5.16	25.10
94	ER33a	ExonRegion	0	11.10	11.38	34.68	39.78	1.64	5.52
95	E33a_E34a	KnownJunction	0	9.46	16.14	52.09	48.77	0.00	14.10
96	ER34a	ExonRegion	0	16.15	13.78	46.05	41.94	1.00	6.07
97	E34_Da	NovelBoundary	0	13.80	0.00	8.31	5.71	0.00	0.00
98	E34a_E35a	KnownJunction	0	14.22	3.26	38.88	20.93	0.00	0.00
99	E35_Aa	NovelBoundary	1	0.00	13.22	3.07	2.88	0.00	0.00
100	ER35a	ExonRegion	0	15.17	26.18	63.53	45.42	0.00	4.81
101	E35a_E36a	KnownJunction	0	21.03	24.41	41.50	34.69	0.00	0.00
102	ER36a	ExonRegion	0	13.21	18.96	61.25	48.31	3.92	5.55
103	E36a_E37a	KnownJunction	0	10.97	24.24	93.64	89.39	17.65	3.78
104	ER37a	ExonRegion	0	15.24	28.04	71.24	51.05	3.62	1.40
105	E37_Da	NovelBoundary	0	0.00	10.46	0.00	0.00	0.00	0.00
106	E37a_E38a	KnownJunction	0	6.69	22.67	42.75	23.33	17.31	9.99
107	ER38a	ExonRegion	0	13.41	15.07	67.51	33.43	10.29	1.61
108	E38a_E39a	KnownJunction	0	11.21	10.46	42.35	37.08	7.74	4.45
109	ER39a	ExonRegion	0	12.63	13.00	71.27	46.22	4.70	1.38
110	E39a_E40a	KnownJunction	0	19.40	17.55	32.62	26.97	4.74	0.00
111	ER40a	ExonRegion	0	20.77	11.11	40.70	36.13	4.12	2.17
112	E40a_E41a	KnownJunction	0	25.73	16.48	33.87	39.04	4.33	3.78
113	ER41a	ExonRegion	0	38.43	29.26	97.10	93.33	5.83	5.23
114	E41a_E42a	KnownJunction	0	26.57	14.62	62.79	58.56	19.31	8.31
115	ER42a	ExonRegion	0	34.01	24.97	62.67	62.64	18.12	16.27
116	E42a_E43a	KnownJunction	0	42.72	35.94	17.99	19.41	16.73	41.98
117	I42	Intron	0	8.24	4.02	4.86	2.76	11.75	10.43
118	I42_AR2	ActiveIntronRegion	0	10.75	5.62	5.10	5.29	26.82	15.55
119	I42_SR2	SilentIntronRegion	0	18.48	9.84	4.94	3.64	20.91	22.36
120	ER43a	ExonRegion	0	34.94	33.58	27.96	38.42	29.73	18.74
121	E43a_E44a	KnownJunction	0	34.04	41.12	72.41	46.33	66.26	28.96
122	ER44a	ExonRegion	1	35.63	27.17	73.81	41.35	58.55	27.76
123	E44a_E45a	KnownJunction	1	52.48	32.45	14.29	31.54	180.54	35.68
124	ER45a	ExonRegion	0	54.40	41.27	53.12	34.05	80.63	40.91
125	E45a_E46a	KnownJunction	1	72.43	59.06	47.87	32.90	161.14	75.23
126	ER46a	ExonRegion	0	91.08	65.66	49.81	41.68	75.97	58.97
127	E46_Da	KnownBoundary	0	59.41	41.57	19.47	30.88	108.29	52.22
128	E46a_E46b	KnownJunction	0	77.07	35.32	20.55	5.98	95.22	108.72
129	ER46b	ExonRegion	0	14.52	12.01	7.69	8.60	41.94	21.93
130	E46_Ab	KnownBoundary	0	8.80	9.28	2.39	18.65	53.27	42.57
131	ER46c	ExonRegion	0	63.83	52.69	14.72	12.42	158.44	158.73
132	E46_Db	KnownBoundary	0	3.74	0.00	2.96	5.33	39.45	35.77
133	ER46d	ExonRegion	0	5.29	1.86	3.69	1.23	34.94	21.51
134	IG24_AR4	ActiveIntergenicRegion	0	3.97	0.56	9.04	6.07	39.09	16.90