Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	BRD9	Gene	0	39.11	27.77	11.23	8.14	15.80	7.74
2	467963	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	323510	Transcript	0	0	0	0	0	0	0
4	495265	Transcript	0	0	0	0	0	0	0
5	334893	Transcript	0	36.21	43.76	10.59	3.37	0.00	5.04
6	466684	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
7	483173	Transcript	0	0	0	0	0	0	0
8	487688	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	489816	Transcript	0	0.00	0.00	0.00	0.00	0.00	4.95
10	433367	Transcript	0	0	0	0	0	0	0
11	435709	Transcript	0	0	0	0	0	0	0
12	415990	Transcript	0	0	0	0	0	0	0
13	490814	Transcript	0	0.06	0.12	0.06	0.09	0.00	0.02
14	489093	Transcript	0	0.00	1.20	1.20	0.60	0.00	0.00
15	388890	Transcript	0	0	0	0	0	0	0
16	495794	Transcript	0	8.83	6.51	2.61	1.99	0.04	0.02
17	494422	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
18	475706	Transcript	0	0.00	0.00	1.09	0.00	0.00	0.00
19	323547	Transcript	0	0	0	0	0	0	0
20	493082	Transcript	0	114.81	66.95	53.88	34.70	0.35	0.80
21	483234	Transcript	0	32.11	12.86	10.52	10.22	0.19	0.00
22	497410	Transcript	0	0.67	0.60	0.01	0.21	0.34	0.02
23	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
24	ER1b	ExonRegion	0	14.71	25.50	3.20	0.72	0.00	10.79
25	E1a_E3a	KnownJunction	0	87.73	73.85	14.12	6.47	0.00	43.66
26	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
27	ER2b	ExonRegion	0	0.00	0.52	0.63	0.00	0.00	0.00
28	E2a_E3a	KnownJunction	0	2.53	2.81	2.90	0.00	0.00	0.00
29	ER2c	ExonRegion	0	1.79	2.08	2.84	0.00	0.00	0.00
30	ER2d	ExonRegion	0	0.00	0.00	0.00	0.00	1.40	0.00
31	E2_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
32	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	ER2e	ExonRegion	0	0.00	0.00	2.97	0.00	0.87	0.00
34	E2c_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	ER3a	ExonRegion	0	103.20	110.58	23.26	22.69	0.78	21.16
36	E3_Ab	KnownBoundary	0	126.24	194.89	29.66	48.34	3.75	25.77
37	ER3b	ExonRegion	0	140.92	176.12	41.53	32.42	3.21	12.00
38	E3a_E4c	KnownJunction	0	189.87	197.59	40.87	41.76	0.00	0.00
39	ER4a	ExonRegion	0	0.00	1.20	1.20	0.60	0.00	0.00
40	E4_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
41	E4_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
42	ER4b	ExonRegion	0	130.90	143.35	28.24	30.16	0.00	0.00
43	ER4c	ExonRegion	0	88.36	104.46	22.10	25.85	1.00	1.92
44	E4_Da	NovelBoundary	0	5.60	0.00	0.00	5.33	0.00	0.00
45	E4a_E5b	KnownJunction	0	3.74	8.10	7.06	2.77	0.00	0.00
46	E4a_E5c	KnownJunction	0	140.82	102.82	35.69	12.94	0.00	4.70
47	ER5a	ExonRegion	0	3.56	0.02	8.54	3.31	0.00	0.00
48	E5_Ab	KnownBoundary	0	2.77	0.00	3.53	2.99	0.00	0.00
49	ER5b	ExonRegion	0	9.76	11.57	14.15	5.56	0.02	0.03
50	E5_Ac	KnownBoundary	0	8.98	8.38	2.68	4.95	0.00	0.00
51	ER5c	ExonRegion	0	89.67	74.18	21.73	10.20	0.11	3.16
52	E5_Da	NovelBoundary	0	74.66	57.60	12.47	5.71	0.00	4.87
53	E5a_E5d	KnownJunction	0	36.21	43.76	10.59	3.37	0.00	5.04
54	E5b_E6a	KnownJunction	0	49.95	16.87	20.49	8.92	0.00	0.00
55	E5b_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
56	ER5d	ExonRegion	0	66.86	51.25	11.59	4.31	0.00	1.85
57	ER5e	ExonRegion	0	63.62	47.24	18.42	9.46	0.00	2.17
58	I5_AR1	ActiveIntronRegion	0	1.25	2.00	1.26	6.66	0.00	0.00
59	E6_Aa	NovelBoundary	0	0.00	0.00	15.71	0.00	0.00	0.00
60	ER6a	ExonRegion	0	63.34	40.17	23.90	15.08	0.00	5.25
61	ER6b	ExonRegion	0	52.08	39.63	38.57	23.95	3.80	3.35
62	E6_Da	NovelBoundary	0	47.42	34.98	25.56	16.53	3.41	0.00
63	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
64	E6b_E8a	KnownJunction	0	76.22	64.06	40.64	17.67	8.74	0.00
65	ER6c	ExonRegion	0	54.70	49.01	37.03	16.45	3.45	0.67
66	ER7a	ExonRegion	0	0.00	0.00	0.00	0.95	0.00	0.00
67	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
68	E8_Aa	NovelBoundary	0	0.00	5.74	8.88	6.74	0.00	0.00
69	ER8a	ExonRegion	0	67.22	42.95	44.37	24.08	11.94	3.67
70	E8a_E10a	KnownJunction	0	24.40	12.15	13.95	9.19	9.07	0.00
71	E8a_E10b	KnownJunction	0	28.20	18.56	20.55	3.37	8.74	0.00
72	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
73	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
74	ER10a	ExonRegion	0	20.39	15.33	4.95	13.42	5.19	0.00
75	E10_Ab	KnownBoundary	1	18.38	22.05	0.00	19.14	7.41	0.00
76	ER10b	ExonRegion	0	58.38	39.62	18.19	14.41	9.84	0.82
77	E10a_E11a	KnownJunction	0	83.58	63.67	19.92	19.14	16.98	9.24
78	E10a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
79	ER11a	ExonRegion	0	44.66	44.17	16.37	13.27	10.42	3.41
80	E11_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
81	E11_Db	KnownBoundary	0	0.00	2.98	0.00	0.00	0.00	0.00
82	E11b_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
83	E11b_E12b	KnownJunction	1	25.67	57.26	0.00	0.00	9.07	8.73
84	E11b_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
85	ER11b	ExonRegion	0	31.67	45.71	8.69	2.15	3.62	3.70
86	ER11c	ExonRegion	0	2.59	4.18	1.36	0.67	0.00	0.00
87	E11_Ab	KnownBoundary	0	6.81	6.86	0.00	0.00	0.00	0.00
88	ER11d	ExonRegion	0	9.62	13.87	2.37	4.81	0.00	0.00
89	E11_Ac	KnownBoundary	0	10.97	18.28	3.30	6.74	0.00	0.00
90	ER11e	ExonRegion	0	4.37	11.32	3.18	4.65	0.00	0.00
91	E11_Dc	KnownBoundary	0	0.00	3.49	2.68	3.26	0.00	0.00
92	E11c_E12b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
93	E11_Dd	KnownBoundary	0	3.13	6.97	0.00	0.00	0.00	0.00
94	E11d_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
95	ER11f	ExonRegion	0	0.67	7.00	3.20	1.13	0.00	1.07
96	ER11g	ExonRegion	0	6.49	6.96	0.44	1.31	0.00	0.00
97	E11e_E12a	KnownJunction	0	20.97	19.85	0.00	3.15	0.00	0.00
98	ER12a	ExonRegion	0	10.53	1.53	2.70	1.52	0.20	0.10
99	E12_Ab	KnownBoundary	0	16.51	2.98	6.09	5.93	0.00	0.00
100	ER12b	ExonRegion	0	56.70	43.13	9.36	11.00	7.47	6.24
101	E12a_E13b	KnownJunction	0	78.15	43.65	9.17	8.26	23.72	8.31
102	E13_Aa	NovelBoundary	0	105.33	110.35	42.98	26.70	10.32	13.01
103	ER13a	ExonRegion	0	93.41	61.59	63.47	36.06	1.04	2.39
104	E13_Ab	KnownBoundary	0	111.23	53.88	68.31	43.06	4.91	4.79
105	ER13b	ExonRegion	0	227.25	121.79	125.69	77.35	14.20	9.76
106	E13_Da	NovelBoundary	0	35.79	38.53	16.00	15.88	0.00	0.00
107	E13a_E14b	KnownJunction	0	312.67	205.69	203.11	166.33	12.49	5.21
108	E14_Aa	NovelBoundary	0	63.03	25.76	23.11	34.04	0.00	0.00
109	ER14a	ExonRegion	0	32.11	12.86	10.52	10.22	0.19	0.00
110	E14_Ab	KnownBoundary	1	55.56	7.54	2.90	15.55	0.00	0.00
111	ER14b	ExonRegion	0	279.78	238.42	104.87	96.96	14.71	4.07
112	E14a_E15a	KnownJunction	0	67.91	83.86	27.89	9.30	11.90	7.56
113	E14a_E22a	KnownJunction	0	217.77	113.45	86.64	60.57	0.00	0.00
114	ER15a	ExonRegion	0	93.67	89.39	17.38	15.91	28.30	7.58
115	E15b_E16a	KnownJunction	0	134.43	83.13	22.49	32.30	45.28	0.00
116	ER15b	ExonRegion	0	115.33	65.96	19.55	26.93	27.35	2.78
117	ER16a	ExonRegion	0	105.78	68.03	22.12	21.05	23.46	7.59
118	E16a_E17a	KnownJunction	0	75.20	73.40	18.90	5.82	31.63	27.45
119	ER17a	ExonRegion	0	120.43	79.11	14.68	14.58	25.59	13.03
120	E17_Da	KnownBoundary	0	0.00	0.00	2.73	0.00	0.00	0.00
121	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
122	E17a_E18b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	5.21
123	E17a_E20b	KnownJunction	1	156.06	82.46	20.49	48.88	58.76	32.16
124	ER17b	ExonRegion	0	0.00	0.00	1.09	0.00	0.00	0.00
125	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.17
126	ER18b	ExonRegion	0	0.00	1.06	0.00	0.00	0.92	1.04
127	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
128	E18a_E20b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.70
129	ER19a	ExonRegion	0	0.59	1.22	0.64	0.00	0.00	0.00
130	E19a_E20c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
131	ER20a	ExonRegion	0	0.67	0.60	0.01	0.21	0.34	0.02
132	E20_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	4.49	0.00
133	E20_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	4.91	0.00
134	ER20b	ExonRegion	1	134.28	67.73	11.73	32.31	39.41	14.81
135	ER20c	ExonRegion	0	81.47	55.48	15.99	15.88	26.24	10.54
136	E20a_E21a	KnownJunction	0	104.42	85.55	17.93	31.54	52.94	31.57
137	ER21a	ExonRegion	0	131.10	73.54	21.09	11.00	91.61	34.27
138	E21_Da	KnownBoundary	0	211.56	136.56	23.11	14.79	263.52	135.84
139	ER21b	ExonRegion	0	181.25	112.55	15.16	3.04	150.59	70.14
140	E21_Db	KnownBoundary	0	360.15	189.27	18.73	5.44	575.07	193.18
141	ER21c	ExonRegion	0	131.58	77.75	3.81	4.65	210.70	104.29
142	E21_Dd	NovelBoundary	0	10.42	13.72	3.30	5.98	3.91	0.00
143	ER21d	ExonRegion	0	4.75	6.75	0.00	0.00	12.20	11.57
144	I21_AR2	ActiveIntronRegion	1	9.33	16.27	0.54	2.15	0.00	0.00
145	I21_AR3	ActiveIntronRegion	1	7.88	17.87	0.94	2.15	0.00	0.00
146	I21_AR4	ActiveIntronRegion	0	11.12	12.16	3.96	2.15	0.00	0.00
147	I21_AR5	ActiveIntronRegion	0	10.56	6.97	4.35	2.15	0.00	0.00
148	I21_AR6	ActiveIntronRegion	0	8.45	0.00	2.90	0.00	0.00	0.00
149	I21_AR7	ActiveIntronRegion	0	8.45	1.15	2.17	0.00	0.00	0.00
150	I21_SR2	SilentIntronRegion	0	8.07	2.08	1.23	0.00	0.00	0.00
151	I21_AR12	ActiveIntronRegion	0	9.01	2.02	0.44	1.06	0.00	0.00
152	ER22a	ExonRegion	0	33.25	25.80	11.53	7.46	0.00	0.00