Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	HERC3	Gene	0	35.80	10.79	38.45	16.89	77.71	22.71
2	402738	Transcript	0	4.98	1.78	1.54	0.00	4.00	1.59
3	431413	Transcript	0	0.00	0.00	2.54	0.00	0.00	0.00
4	422770	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	407637	Transcript	0	4.56	1.17	14.50	2.95	4.48	1.14
6	426683	Transcript	0	2.18	0.00	0.00	0.00	0.00	0.00
7	452979	Transcript	0	0.00	0.67	0.00	0.06	1.16	0.00
8	434462	Transcript	0	0	0	0	0	0	0
9	264345	Transcript	0	0	0	0	0	0	0
10	470815	Transcript	0	1.24	0.01	2.35	0.76	0.64	0.04
11	ER1a	ExonRegion	0	0.00	0.00	0.91	0.00	0.00	0.00
12	ER1b	ExonRegion	0	1.39	0.00	4.61	2.76	0.00	0.00
13	E1_Ac	KnownBoundary	0	0.00	0.00	3.02	6.42	0.00	0.00
14	E1_Ad	KnownBoundary	0	0.00	0.00	10.02	3.21	0.00	0.00
15	ER1c	ExonRegion	0	2.11	0.00	10.68	4.49	0.00	0.00
16	ER1d	ExonRegion	0	4.55	1.36	21.95	8.48	0.00	0.00
17	E1a_E4a	KnownJunction	0	10.61	3.15	12.58	3.10	0.00	0.00
18	ER2a	ExonRegion	0	1.41	0.00	0.00	0.00	0.00	0.00
19	E2a_E4a	KnownJunction	0	2.95	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	0.00	1.35	0.00	0.13	2.32	0.00
21	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	0	4.37	2.15	12.32	8.54	1.56	0.00
23	E4a_E5a	KnownJunction	0	0.00	0.00	2.90	0.00	0.00	0.00
24	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
25	E4a_E6b	KnownJunction	0	2.53	2.59	17.08	12.40	5.16	0.00
26	ER5a	ExonRegion	0	0.00	0.00	2.17	0.00	0.00	0.00
27	ER5b	ExonRegion	0	0.00	0.00	5.04	0.00	0.00	0.00
28	E5a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
29	ER6a	ExonRegion	0	1.06	3.12	11.95	4.31	1.81	0.00
30	ER6b	ExonRegion	0	9.14	10.89	48.42	17.74	2.54	2.67
31	E6a_E7a	KnownJunction	0	6.27	9.45	27.10	10.66	4.83	9.57
32	ER7a	ExonRegion	0	7.88	13.50	28.75	14.46	1.58	7.50
33	E7_Da	KnownBoundary	0	6.27	13.89	34.90	11.96	0.00	18.89
34	ER7b	ExonRegion	0	5.12	5.77	30.37	14.60	5.74	3.43
35	E7c_E8a	KnownJunction	0	6.63	3.49	29.43	8.81	14.40	4.79
36	ER7c	ExonRegion	0	4.22	2.08	28.24	6.46	7.23	1.85
37	I7_AR1	ActiveIntronRegion	0	2.11	0.00	12.55	0.48	0.00	0.00
38	E8_Aa	NovelBoundary	0	5.60	9.11	11.78	6.74	0.00	0.00
39	ER8a	ExonRegion	0	4.22	2.08	27.52	6.46	7.23	1.85
40	ER8b	ExonRegion	0	5.15	5.13	24.25	7.95	0.35	3.59
41	E8b_E9a	KnownJunction	0	6.93	9.06	48.44	18.92	0.00	12.01
42	I8	Intron	0	1.44	2.43	9.53	5.88	0.00	0.00
43	I8_SR1	SilentIntronRegion	0	1.38	2.98	10.14	6.36	0.00	0.00
44	ER9a	ExonRegion	0	8.53	5.63	59.51	18.93	4.21	4.22
45	E9b_E10a	KnownJunction	0	24.46	20.87	183.64	56.98	25.80	20.07
46	ER9b	ExonRegion	0	16.89	14.54	123.83	51.70	10.85	11.11
47	ER10a	ExonRegion	0	10.60	7.09	68.76	38.33	5.23	13.62
48	E10a_E11a	KnownJunction	1	13.74	6.97	55.33	5.71	5.08	17.38
49	ER11a	ExonRegion	0	11.31	4.52	41.99	21.49	6.21	10.92
50	E11a_E12a	KnownJunction	0	7.47	11.31	42.92	23.60	4.58	24.10
51	E12_Aa	NovelBoundary	0	0.00	0.00	2.39	7.61	0.00	0.00
52	ER12a	ExonRegion	0	7.20	7.83	56.78	18.41	3.16	14.35
53	E12_Da	KnownBoundary	0	0.00	3.15	18.39	0.00	0.00	0.00
54	E12a_E13b	KnownJunction	0	2.53	5.79	40.25	12.45	4.99	36.77
55	ER12b	ExonRegion	0	4.56	2.08	14.98	2.15	2.28	0.00
56	E12_Db	KnownBoundary	0	6.75	0.00	9.22	3.37	9.16	0.00
57	ER12c	ExonRegion	0	4.56	1.17	14.50	2.95	4.48	1.14
58	E12_Dc	NovelBoundary	0	0.00	0.00	12.58	3.21	4.99	0.00
59	ER13a	ExonRegion	0	0.04	0.04	7.05	2.29	1.93	0.13
60	E13_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
61	ER13b	ExonRegion	0	9.95	1.34	46.68	18.20	18.46	33.66
62	E13_Da	NovelBoundary	0	0.00	0.00	19.81	2.94	0.00	0.00
63	E13a_E14a	KnownJunction	1	13.08	0.00	100.47	29.36	46.94	109.65
64	E13a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	E14_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	34.38	70.19
66	ER14a	ExonRegion	1	5.44	2.44	64.10	27.75	22.65	47.63
67	E14_Da	NovelBoundary	0	3.56	0.00	6.72	0.00	38.12	39.96
68	E14a_E15a	KnownJunction	0	8.86	0.00	121.76	52.74	51.77	69.77
69	I14_AR1	ActiveIntronRegion	0	0.00	0.00	5.00	4.20	29.32	29.31
70	ER15a	ExonRegion	0	6.30	0.00	94.72	44.02	13.83	16.29
71	E15_Da	NovelBoundary	0	3.56	0.00	38.20	14.84	0.00	0.00
72	E15a_E16a	KnownJunction	0	14.64	0.00	78.78	45.46	0.00	0.00
73	E16_Aa	NovelBoundary	0	0.00	0.00	3.36	8.16	0.00	0.00
74	ER16a	ExonRegion	0	13.70	4.32	72.59	38.62	0.06	0.00
75	E16_Da	NovelBoundary	0	0.00	0.00	14.40	3.04	0.00	0.00
76	E16a_E17a	KnownJunction	0	21.87	6.47	154.84	60.35	0.00	0.00
77	E16a_E18a	KnownJunction	0	3.68	0.00	0.00	0.00	0.00	0.00
78	ER17a	ExonRegion	0	12.82	5.76	67.54	30.01	0.00	0.00
79	E17a_E18a	KnownJunction	0	13.62	0.00	66.55	19.19	0.00	0.00
80	I17_AR1	ActiveIntronRegion	0	1.85	0.40	9.88	2.92	0.00	0.00
81	I17_SR2	SilentIntronRegion	0	1.46	1.00	12.84	7.20	0.00	0.00
82	ER18a	ExonRegion	0	10.25	5.24	49.94	23.22	1.68	2.56
83	E18a_E19a	KnownJunction	1	6.75	5.85	72.86	13.05	0.00	0.00
84	ER19a	ExonRegion	0	5.21	7.11	51.63	22.01	0.34	3.10
85	E19_Da	KnownBoundary	0	9.10	13.44	44.40	13.70	3.58	9.07
86	ER19b	ExonRegion	0	4.69	5.28	34.89	17.71	2.97	1.70
87	E19_Db	NovelBoundary	1	0.00	0.00	26.36	0.00	0.00	0.00
88	E19b_E20a	KnownJunction	0	6.03	0.00	30.63	17.02	8.91	0.00
89	E19b_E21a	NovelJunction	0	0.00	0.00	9.45	5.60	0.00	0.00
90	E20a_E21a	KnownJunction	0	16.45	0.00	56.30	15.33	0.00	0.00
91	ER20a	ExonRegion	0	9.24	0.26	50.33	19.12	2.86	0.00
92	E21_Aa	NovelBoundary	1	3.74	0.00	20.55	0.00	5.16	0.00
93	ER21a	ExonRegion	0	18.18	12.88	36.28	17.55	1.43	1.56
94	E21a_E22a	KnownJunction	0	24.16	25.37	24.59	14.68	4.66	0.00
95	E22_Aa	NovelBoundary	0	0.00	0.00	2.73	6.31	0.00	0.00
96	ER22a	ExonRegion	0	12.33	9.77	38.33	19.49	2.57	0.82
97	E22a_E23a	KnownJunction	0	27.84	4.84	39.62	20.28	3.41	0.00
98	ER23a	ExonRegion	0	16.42	12.83	43.74	19.90	4.28	1.63
99	E23a_E24a	KnownJunction	0	10.61	10.46	44.34	18.49	14.32	4.70
100	E24_Aa	NovelBoundary	1	0.00	14.06	0.00	5.00	0.00	0.00
101	ER24a	ExonRegion	0	26.35	18.66	58.38	30.73	5.40	4.84
102	E24_Da	NovelBoundary	1	0.00	13.95	2.90	2.99	5.16	0.00
103	E24a_E25a	KnownJunction	0	13.20	28.52	69.56	31.81	0.00	9.24
104	I24	Intron	0	0.59	0.78	9.12	3.42	0.00	0.35
105	I24_SR1	SilentIntronRegion	0	0.59	0.78	9.13	3.42	0.00	0.35
106	ER25a	ExonRegion	0	20.07	24.31	50.45	28.33	2.54	7.74
107	E25a_E26a	KnownJunction	0	33.80	19.12	28.12	42.03	13.82	18.64
108	E26_Aa	NovelBoundary	0	0.00	0.00	19.07	2.56	0.00	0.00
109	ER26a	ExonRegion	0	44.49	21.63	60.88	37.45	7.12	7.87
110	E26a_E27a	KnownJunction	0	48.63	13.95	53.57	32.24	21.47	9.07
111	I26_AR2	ActiveIntronRegion	0	3.95	0.00	1.39	0.06	23.56	13.18
112	ER27a	ExonRegion	0	29.49	12.93	62.58	33.24	9.58	5.76
113	E27a_E28a	KnownJunction	1	62.97	16.20	92.16	58.99	73.83	7.64
114	ER28a	ExonRegion	0	40.57	7.22	83.08	32.75	16.01	6.43
115	E28_Da	NovelBoundary	0	0.00	0.00	9.11	6.20	7.99	0.00
116	E28a_E29a	KnownJunction	0	21.87	10.29	65.81	28.55	12.15	0.00
117	ER29a	ExonRegion	0	109.74	25.66	44.13	21.09	286.12	74.10
118	ER29b	ExonRegion	0	9.95	3.56	2.17	0.00	8.01	3.17
119	IG41	Intergenic	0	35.01	18.98	14.56	13.27	119.90	141.44
120	IG41_AR1	ActiveIntergenicRegion	0	44.32	25.99	13.36	15.07	187.80	221.53
121	IG41_SR1	SilentIntergenicRegion	0	26.35	11.23	10.31	6.37	0.00	0.00
122	IG41_AR2	ActiveIntergenicRegion	0	15.37	4.68	19.51	11.73	0.00	0.00