Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	MDS1	Gene	0	0.41	1.19	0.50	0.42	0.00	0.09
2	498368	Transcript	0	0.39	1.69	0.39	0.09	0.00	0.00
3	485957	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.51
4	494292	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
5	486748	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	1.94	8.43	1.95	0.46	0.00	0.00
7	E1_Ab	KnownBoundary	0	7.47	41.23	6.77	3.37	0.00	0.00
8	ER1b	ExonRegion	0	2.72	8.14	1.92	1.91	0.00	0.00
9	E1_Ac	KnownBoundary	0	2.77	9.84	5.12	0.00	0.00	0.00
10	ER1c	ExonRegion	0	8.95	14.02	7.03	3.58	0.00	0.00
11	E1_Ad	KnownBoundary	0	7.17	13.95	0.00	6.52	0.00	0.00
12	ER1d	ExonRegion	0	3.32	6.16	0.00	4.75	0.00	0.00
13	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1a_E3a	KnownJunction	0	0.00	2.92	0.00	3.21	0.00	0.00
15	I1_AR1	ActiveIntronRegion	0	0.41	0.00	0.00	0.83	1.70	7.85
16	I1_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	5.08	20.36
17	I1_SR2	SilentIntronRegion	0	2.01	2.26	0.00	1.98	2.82	7.64
18	I1_AR3	ActiveIntronRegion	0	2.62	2.66	0.00	2.39	8.71	24.07
19	Ix	Intron	0	0.87	3.42	0.67	0.44	13.41	46.13
20	Ix_AR1	ActiveIntronRegion	0	0.28	3.38	0.88	0.58	17.64	60.44
21	I1_AR1	ActiveIntronRegion	0	0.00	0.00	0.33	5.79	0.12	0.28
22	I1_AR3	ActiveIntronRegion	0	0.00	0.00	0.31	2.57	7.42	39.30
23	I1_AR7	ActiveIntronRegion	0	0.00	0.83	1.14	3.82	4.81	25.81
24	I1_AR11	ActiveIntronRegion	0	0.00	0.97	0.00	5.80	0.00	0.00
25	E2_Aa	NovelBoundary	0	0.00	0.00	9.28	5.98	0.00	0.00
26	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
27	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	I2_AR3	ActiveIntronRegion	0	0.00	0.00	0.60	1.77	15.72	31.92
29	I2_AR4	ActiveIntronRegion	0	1.40	2.89	2.31	1.14	11.01	23.07
30	I2_AR4	ActiveIntronRegion	0	0.00	0.00	4.35	0.00	1.12	6.85
31	ER3a	ExonRegion	0	1.21	5.55	2.78	2.97	0.00	0.17
32	E3_Da	KnownBoundary	0	0.00	5.06	5.58	2.72	0.00	4.70
33	ER3b	ExonRegion	0	0.00	0.81	3.50	3.80	0.00	1.31
34	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
35	E3b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
36	I3_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	16.66
37	I3_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	19.51
38	I3_AR5	ActiveIntronRegion	0	1.11	2.55	0.76	0.76	4.13	11.81
39	I3_AR11	ActiveIntronRegion	0	0.86	0.00	0.37	0.71	10.36	15.96
40	Ix_AR11	ActiveIntronRegion	0	0.00	0.00	0.00	0.93	2.48	13.02
41	Ix_SR7	SilentIntronRegion	0	0.00	0.00	1.12	0.00	1.86	8.07
42	Ix_AR7	ActiveIntronRegion	0	1.00	0.00	0.00	1.02	2.29	14.01
43	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.03
44	ER5a	ExonRegion	0	0.00	0.00	1.22	0.00	0.00	0.00
45	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
46	Ix_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	6.27	0.00	1.85
47	Ix_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	8.62	0.00	1.85
48	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
49	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
50	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
51	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
52	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
53	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
54	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
55	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
56	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
57	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
58	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
59	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
60	E11a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
61	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
62	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
63	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
64	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
65	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
66	E14_Da	NovelBoundary	0	0.00	6.97	0.00	0.00	0.00	0.00
67	E14b_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
68	ER14b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
69	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
70	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
71	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
72	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
73	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
74	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
75	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
76	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
77	Ix_AR1	ActiveIntronRegion	0	0.50	7.37	0.00	1.53	3.84	6.55
78	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
79	ER20a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00