Order SeqName SeqType IsAE Frontal_mRNA Amygdala_mRNA Frontal_Ribo Amygdala_Ribo Frontal_Ampl Amygdala_Ampl 1 NLGN1 Gene 0 14.64 7.76 29.78 19.09 47.38 31.78 2 423427 Transcript 0 3.76 2.49 17.83 5.92 1.83 0.17 3 413821 Transcript 0 0.00 4.27 0.00 6.20 0.00 0.00 4 482120 Transcript 0 0.00 0.00 1.72 0.57 0.00 0.00 5 457714 Transcript 0 1.92 0.79 2.74 1.85 3.25 1.72 6 361589 Transcript 1 8.15 3.25 18.18 4.04 4.13 7.29 7 415045 Transcript 0 0.00 0.00 6.43 5.16 1.12 1.31 8 401917 Transcript 0 0 0 0 0 0 0 9 466350 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 10 469564 Transcript 0 0 0 0 0 0 0 11 490929 Transcript 0 0.00 0.00 3.34 1.40 0.00 0.00 12 469727 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 13 360119 Transcript 0 0.53 2.60 4.35 3.23 1.81 0.46 14 416499 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1a ExonRegion 0 4.57 4.98 21.71 9.23 3.67 0.34 16 E1_Da NovelBoundary 0 3.49 0.00 2.56 6.09 4.08 0.00 17 E1a_E7a KnownJunction 0 2.95 0.00 13.95 2.61 0.00 0.00 18 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 19 ER2b ExonRegion 0 1.73 2.14 6.47 4.92 0.49 1.00 20 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E7a KnownJunction 1 0.00 8.55 0.00 12.40 0.00 0.00 22 I2 Intron 0 0.00 0.82 9.03 7.25 0.00 0.00 23 I2_SR1 SilentIntronRegion 0 0.00 0.83 9.08 7.29 0.00 0.00 24 E3_Aa NovelBoundary 0 0.00 6.30 15.43 9.46 0.00 0.00 25 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 26 E3_Da NovelBoundary 0 0.00 0.00 24.65 6.63 0.00 0.00 27 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 28 I3 Intron 0 1.18 0.29 10.79 5.28 0.25 0.00 29 I3_SR1 SilentIntronRegion 0 1.18 0.29 10.80 5.28 0.25 0.00 30 ER4a ExonRegion 0 0.00 0.00 3.44 1.14 0.00 0.00 31 E5_Aa NovelBoundary 0 0.00 3.26 12.64 13.65 15.15 9.99 32 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 33 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 34 I5_AR1 ActiveIntronRegion 0 3.24 1.50 4.29 1.78 1.86 6.58 35 I5_AR2 ActiveIntronRegion 0 1.45 0.95 1.49 0.85 9.86 12.80 36 I5_AR5 ActiveIntronRegion 0 0.00 0.00 1.48 2.69 2.25 7.14 37 ER6a ExonRegion 0 8.15 3.25 18.18 4.04 4.13 7.29 38 E6_Ab KnownBoundary 1 5.78 5.62 22.26 0.00 0.00 0.00 39 ER6b ExonRegion 1 16.06 7.58 26.70 4.38 1.00 0.00 40 E6a_E7a KnownJunction 0 0.00 0.00 19.92 8.59 3.66 0.00 41 ER7a ExonRegion 0 10.27 15.45 59.78 47.08 0.07 0.00 42 E7_Ab KnownBoundary 1 6.75 9.84 73.26 12.45 0.00 0.00 43 E7_Da KnownBoundary 0 3.74 20.92 13.72 10.11 0.00 0.00 44 ER7b ExonRegion 1 12.03 16.55 97.33 23.05 0.00 0.00 45 E7_Db KnownBoundary 0 0.00 0.00 35.52 13.76 0.00 0.00 46 ER7c ExonRegion 1 10.56 14.54 95.59 21.54 0.00 0.00 47 ER7d ExonRegion 0 3.50 5.62 76.73 42.22 2.21 0.46 48 E7c_E8a KnownJunction 0 0.00 0.00 19.75 19.57 3.75 5.12 49 E7c_E9a NovelJunction 0 0.00 0.00 12.24 0.00 0.00 0.00 50 E7c_E10a KnownJunction 0 0.00 2.76 17.93 14.08 0.00 4.20 51 I7 Intron 0 0.36 0.36 9.71 5.56 0.00 0.32 52 I7_SR1 SilentIntronRegion 0 0.36 0.36 9.76 5.58 0.00 0.32 53 E8_Aa NovelBoundary 0 2.71 6.97 26.53 20.50 0.00 3.95 54 ER8a ExonRegion 0 0.00 0.00 3.95 6.25 1.81 1.42 55 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 56 E8a_E10a NovelJunction 0 0.00 0.00 0.00 8.10 0.00 0.00 57 I8_AR1 ActiveIntronRegion 0 5.52 2.25 12.08 3.82 77.71 43.59 58 I8_AR2 ActiveIntronRegion 1 4.08 0.37 6.63 6.53 13.03 24.77 59 I8_AR8 ActiveIntronRegion 0 2.56 0.50 3.28 3.13 12.56 13.44 60 I8_AR9 ActiveIntronRegion 0 9.28 2.88 1.72 0.33 35.47 18.59 61 I8_AR10 ActiveIntronRegion 0 5.57 1.83 1.91 0.95 15.08 2.44 62 ER9a ExonRegion 0 0.00 0.00 2.75 0.00 0.06 0.00 63 E9a_E10a KnownJunction 0 0.00 0.00 5.69 0.00 0.00 0.00 64 ER10a ExonRegion 0 4.87 4.36 33.60 16.84 4.82 3.02 65 E10_Da NovelBoundary 0 0.00 0.00 8.37 11.20 0.00 0.00 66 E10a_E14b KnownJunction 0 3.49 6.13 17.70 13.00 19.06 4.95 67 I10 Intron 0 4.97 1.97 18.37 9.55 10.16 5.77 68 I10_SR1 SilentIntronRegion 0 5.19 1.52 18.31 8.98 6.52 1.58 69 I10_AR1 ActiveIntronRegion 1 25.04 6.42 20.36 15.92 71.19 18.31 70 I10_SR2 SilentIntronRegion 0 5.33 1.81 16.23 8.63 9.48 5.16 71 I10_AR2 ActiveIntronRegion 0 0.00 0.00 13.76 5.14 2.30 2.88 72 I10_AR3 ActiveIntronRegion 1 0.00 2.47 15.86 10.43 0.97 24.59 73 I10_SR3 SilentIntronRegion 0 0.89 1.02 23.77 8.38 16.76 9.75 74 I10_AR4 ActiveIntronRegion 0 3.48 2.79 19.75 9.21 187.36 154.12 75 I10_SR4 SilentIntronRegion 0 1.02 2.74 11.82 6.46 0.25 2.08 76 I10_AR5 ActiveIntronRegion 0 3.75 3.04 43.08 20.32 7.00 15.89 77 I10_SR5 SilentIntronRegion 0 2.11 0.00 36.93 12.93 5.42 1.85 78 I10_AR6 ActiveIntronRegion 0 2.11 0.00 41.22 9.45 6.03 1.85 79 I10_SR6 SilentIntronRegion 0 9.56 4.03 15.20 6.66 12.36 12.55 80 I10_AR7 ActiveIntronRegion 0 25.07 4.77 9.93 3.04 39.18 19.72 81 I10_SR7 SilentIntronRegion 0 5.84 2.34 15.58 11.20 0.29 2.35 82 I10_AR8 ActiveIntronRegion 1 3.57 3.18 25.42 15.45 0.81 7.14 83 I10_AR9 ActiveIntronRegion 0 2.11 1.73 4.71 8.98 5.42 8.64 84 I10_SR8 SilentIntronRegion 0 1.38 0.66 18.27 9.65 0.69 0.51 85 I10_AR10 ActiveIntronRegion 0 2.22 0.00 14.46 5.28 0.00 0.00 86 I10_AR11 ActiveIntronRegion 0 0.92 0.00 12.34 3.76 0.00 3.23 87 I10_SR9 SilentIntronRegion 0 0.97 0.43 18.98 10.32 3.65 6.23 88 I10_AR12 ActiveIntronRegion 0 0.79 0.39 27.85 16.96 27.22 4.93 89 I10_AR13 ActiveIntronRegion 0 0.00 0.00 20.05 6.46 39.01 20.22 90 I10_SR10 SilentIntronRegion 0 8.89 4.44 15.57 10.38 24.42 6.69 91 I10_AR14 ActiveIntronRegion 0 2.88 0.95 17.54 10.80 4.11 7.05 92 I10_SR11 SilentIntronRegion 0 5.54 2.62 23.99 10.78 9.62 2.82 93 Ix Intron 0 0.72 1.30 26.36 14.53 0.00 0.94 94 Ix_SR1 SilentIntronRegion 0 0.72 1.30 26.38 14.54 0.00 0.94 95 Ix Intron 0 2.60 1.42 21.31 12.19 0.49 15.45 96 Ix_SR1 SilentIntronRegion 0 2.60 1.42 21.33 12.20 0.50 15.47 97 Ix Intron 0 3.18 1.15 16.24 7.13 11.58 4.18 98 Ix_SR1 SilentIntronRegion 0 3.23 1.16 16.00 7.13 12.08 4.36 99 Ix_AR1 ActiveIntronRegion 0 2.15 1.01 22.07 7.23 0.00 0.00 100 I10 Intron 0 4.39 1.86 14.76 8.23 9.46 7.88 101 I10_AR1 ActiveIntronRegion 0 3.14 0.00 15.02 4.20 0.00 0.00 102 I10_SR1 SilentIntronRegion 0 2.34 0.89 13.83 7.03 3.85 2.54 103 I10_AR2 ActiveIntronRegion 0 11.66 2.16 11.26 9.56 36.73 17.76 104 I10_SR2 SilentIntronRegion 0 5.74 0.78 11.55 7.78 28.61 24.57 105 I10_AR3 ActiveIntronRegion 0 4.27 0.76 6.00 7.53 127.69 75.95 106 I10_SR3 SilentIntronRegion 0 2.31 1.08 15.70 8.63 2.26 3.69 107 I10_AR4 ActiveIntronRegion 1 3.52 2.08 2.17 12.21 0.00 0.00 108 I10_AR5 ActiveIntronRegion 0 4.56 2.59 11.53 6.24 0.80 0.00 109 I10_SR4 SilentIntronRegion 0 6.64 2.45 15.40 8.69 0.85 2.19 110 I10_AR6 ActiveIntronRegion 1 0.94 1.38 12.51 3.34 20.84 2.46 111 I10_AR7 ActiveIntronRegion 1 0.73 0.00 23.83 5.43 39.39 10.38 112 I10_SR5 SilentIntronRegion 1 1.72 0.00 33.81 6.60 71.53 18.28 113 I10_AR8 ActiveIntronRegion 0 1.80 2.57 31.43 11.43 85.72 79.03 114 I10_SR6 SilentIntronRegion 0 5.89 1.87 13.68 7.92 5.97 4.23 115 I10_AR9 ActiveIntronRegion 1 0.00 6.68 23.33 6.93 1.41 3.06 116 I10_AR10 ActiveIntronRegion 0 2.65 2.67 13.45 6.83 4.45 2.51 117 I10_SR7 SilentIntronRegion 0 4.23 1.96 15.29 9.06 26.51 18.94 118 I10_AR12 ActiveIntronRegion 0 2.16 1.26 33.75 16.13 0.00 0.00 119 I10_SR8 SilentIntronRegion 0 2.19 1.09 18.72 9.37 0.00 0.00 120 I10_AR13 ActiveIntronRegion 0 2.58 0.39 28.82 11.42 0.67 0.00 121 I10_SR9 SilentIntronRegion 0 7.11 2.53 19.63 10.00 2.80 1.44 122 I10_AR14 ActiveIntronRegion 0 11.94 4.25 14.62 14.80 16.63 8.11 123 I10_AR15 ActiveIntronRegion 0 12.82 2.80 44.47 26.28 17.67 12.71 124 I10_AR16 ActiveIntronRegion 0 4.66 1.59 17.65 14.00 16.35 5.14 125 I10_SR11 SilentIntronRegion 0 48.90 16.06 24.77 11.82 35.32 12.41 126 I10_AR18 ActiveIntronRegion 0 49.92 20.69 48.27 28.01 0.87 0.00 127 I10_AR19 ActiveIntronRegion 0 28.58 13.99 22.05 19.59 0.52 0.00 128 I10_SR12 SilentIntronRegion 0 3.04 1.11 18.40 10.80 6.09 4.75 129 I10_SR13 SilentIntronRegion 0 2.29 1.02 13.71 7.19 2.02 0.74 130 I10_AR21 ActiveIntronRegion 0 7.77 1.86 4.72 1.94 17.05 2.65 131 I10_SR14 SilentIntronRegion 0 8.31 4.93 15.31 1.52 30.11 8.28 132 I10_AR22 ActiveIntronRegion 0 9.05 13.65 7.76 0.00 32.29 12.96 133 I10_AR23 ActiveIntronRegion 0 14.78 19.29 8.69 8.31 53.21 30.94 134 I10_AR24 ActiveIntronRegion 0 19.24 19.39 12.07 8.62 79.95 43.20 135 I10_SR15 SilentIntronRegion 0 25.57 19.16 13.76 8.62 94.42 54.92 136 I10_AR25 ActiveIntronRegion 0 31.67 19.39 11.95 8.62 106.67 49.67 137 I10_AR26 ActiveIntronRegion 0 41.02 21.22 10.09 10.77 106.67 50.91 138 I10_AR27 ActiveIntronRegion 0 42.99 16.62 9.28 7.64 111.27 56.55 139 I10_AR28 ActiveIntronRegion 0 49.97 19.62 10.86 2.15 105.67 53.89 140 I10_AR29 ActiveIntronRegion 0 95.61 47.04 16.58 9.57 386.27 328.03 141 I10_SR16 SilentIntronRegion 0 7.98 3.81 17.55 10.51 4.41 5.26 142 I10_AR30 ActiveIntronRegion 1 0.00 6.23 4.35 4.31 0.00 1.51 143 I10_SR17 SilentIntronRegion 0 0.62 0.70 11.71 6.92 0.08 0.16 144 I10_AR32 ActiveIntronRegion 0 0.40 0.79 10.68 5.89 0.53 0.00 145 I10_SR18 SilentIntronRegion 0 1.96 0.92 11.17 6.36 4.83 4.56 146 I10_AR33 ActiveIntronRegion 0 0.03 0.00 16.33 5.78 0.97 0.00 147 I10_SR19 SilentIntronRegion 0 3.66 1.25 13.24 6.48 12.51 8.94 148 I10_AR41 ActiveIntronRegion 0 68.74 28.89 21.78 13.70 263.29 212.50 149 I10_SR20 SilentIntronRegion 0 1.27 0.79 13.76 7.61 8.62 11.42 150 I10_SR21 SilentIntronRegion 0 1.29 0.58 11.09 6.44 4.94 3.56 151 I10_AR43 ActiveIntronRegion 0 0.84 0.00 21.73 2.44 0.12 0.00 152 I10_AR44 ActiveIntronRegion 0 2.11 0.00 10.93 1.90 1.81 0.00 153 I10_AR45 ActiveIntronRegion 0 0.15 0.00 11.49 8.42 0.72 0.00 154 I10_SR22 SilentIntronRegion 0 0.09 0.72 15.84 6.65 0.00 0.40 155 E11_Aa NovelBoundary 0 3.56 0.00 10.59 0.00 0.00 0.00 156 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 157 ER11b ExonRegion 0 0.00 0.00 5.90 0.00 0.00 0.00 158 ER11c ExonRegion 0 0.00 0.00 7.70 0.11 0.00 0.00 159 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 160 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 161 E11a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 162 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 163 E12_Da NovelBoundary 0 6.69 0.00 23.79 3.37 40.12 9.32 164 E12a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 165 ER13a ExonRegion 0 0.00 0.00 10.02 4.20 0.00 0.00 166 E13_Da NovelBoundary 0 0.00 0.00 2.56 8.32 0.00 0.00 167 E13a_E14b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 168 I13_AR5 ActiveIntronRegion 0 0.00 0.00 10.86 2.15 0.00 0.00 169 ER14a ExonRegion 0 1.06 5.19 8.69 6.46 3.62 0.93 170 ER14b ExonRegion 0 4.63 8.74 24.93 14.81 8.31 0.47 171 E14_Da NovelBoundary 0 0.00 8.44 28.58 30.56 9.82 0.00 172 E14a_E15a KnownJunction 0 0.00 0.00 2.62 5.65 4.33 0.00 173 E14c_E15a KnownJunction 0 0.00 2.53 49.98 30.50 17.06 0.00 174 ER14c ExonRegion 1 0.00 11.83 37.77 27.18 6.81 0.00 175 ER14d ExonRegion 0 0.60 2.52 39.73 32.47 9.04 0.00 176 ER15a ExonRegion 0 5.73 5.61 59.59 30.16 7.44 0.94 177 E15_Ab KnownBoundary 0 3.74 10.01 97.51 33.28 8.66 5.21 178 ER15b ExonRegion 0 6.01 4.11 76.81 32.89 4.58 2.47 179 E15_Da KnownBoundary 0 6.09 0.00 60.00 27.95 13.40 4.53 180 ER15c ExonRegion 0 4.08 8.71 44.46 35.03 7.45 2.41 181 E15_Db KnownBoundary 0 5.66 16.37 80.38 49.15 10.32 5.21 182 ER15d ExonRegion 0 8.50 9.83 78.91 41.05 4.35 2.25 183 E15_Dc KnownBoundary 0 10.61 2.98 44.40 14.52 3.66 3.53 184 ER15e ExonRegion 0 6.44 6.79 50.81 25.12 12.80 3.22 185 E15_Dd KnownBoundary 0 11.93 18.45 15.83 25.45 44.53 7.81 186 ER15f ExonRegion 1 8.01 13.00 34.69 46.83 26.71 5.12 187 E15e_E16a KnownJunction 1 12.77 11.64 51.40 82.16 54.85 17.88 188 ER16a ExonRegion 0 20.87 15.69 71.10 60.38 95.92 37.07 189 E16_Da KnownBoundary 1 3.74 8.10 5.41 10.11 254.12 79.42 190 ER16b ExonRegion 0 7.91 8.81 14.83 11.99 286.96 126.74 191 E16_Db KnownBoundary 0 10.36 3.32 3.36 0.00 256.12 159.01 192 E16b_E16b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 193 E16_Dc KnownBoundary 0 6.57 0.00 11.21 11.91 284.17 199.40 194 E16c_E16c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 195 ER16c ExonRegion 0 14.78 10.39 25.20 20.25 600.98 415.78 196 ER16d ExonRegion 0 46.67 17.41 39.97 20.59 176.69 146.20 197 E16_Ab KnownBoundary 1 10.30 0.00 5.35 0.00 272.18 102.18 198 E16_Ac KnownBoundary 1 37.60 3.15 0.00 0.00 96.22 57.26 199 ER16e ExonRegion 1 42.23 6.23 23.90 10.77 183.51 115.70 200 ER16f ExonRegion 0 26.91 8.40 5.05 0.07 112.12 74.73 201 E16_Dd KnownBoundary 0 8.68 0.00 0.00 0.00 8.32 0.00 202 E16_De KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 5.12 203 ER16g ExonRegion 0 6.33 0.00 2.99 0.00 2.49 8.56 204 ER16h ExonRegion 0 9.61 3.96 13.70 9.27 16.24 8.58