Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	FGF12	Gene	0	60.28	13.39	123.60	29.53	363.59	59.73
2	450716	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
3	445105	Transcript	0	0.00	0.00	2.34	1.33	0.00	0.00
4	491636	Transcript	0	4.37	1.70	12.55	1.54	4.46	6.18
5	466144	Transcript	0	2.37	0.00	16.56	4.56	0.23	0.23
6	448795	Transcript	0	2.53	0.00	0.00	0.00	0.00	0.00
7	418610	Transcript	0	9.78	1.05	4.59	2.21	0.31	0.90
8	430714	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	264730	Transcript	0	0	0	0	0	0	0
10	454309	Transcript	0	0	0	0	0	0	0
11	392454	Transcript	0	88.46	20.99	97.57	17.93	337.26	74.05
12	440901	Transcript	0	3.97	0.80	6.66	4.83	0.00	0.00
13	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
14	E1a_E2f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	0.00	0.00	2.34	1.33	0.00	0.00
16	ER2b	ExonRegion	0	5.92	1.72	47.18	6.93	0.39	0.52
17	E2_Ac	KnownBoundary	0	6.69	0.00	19.47	2.94	0.00	0.00
18	E2_Ad	KnownBoundary	0	30.61	6.69	152.10	22.13	4.66	4.95
19	ER2c	ExonRegion	0	13.59	4.16	110.25	14.54	1.81	1.85
20	ER2d	ExonRegion	0	21.11	7.23	133.22	20.77	2.10	2.44
21	E2_Da	KnownBoundary	0	17.96	3.49	2.85	0.00	0.00	0.00
22	E2a_E2f	KnownJunction	0	17.17	10.01	88.58	22.02	11.99	4.62
23	E2a_E6b	KnownJunction	0	2.53	0.00	0.00	0.00	0.00	0.00
24	ER2e	ExonRegion	0	18.08	10.00	115.41	18.58	5.42	3.70
25	ER2f	ExonRegion	0	9.78	1.05	4.59	2.21	0.31	0.90
26	E2_Af	KnownBoundary	0	54.11	6.97	24.71	0.00	4.58	0.00
27	ER2g	ExonRegion	0	30.73	13.43	107.40	18.07	11.56	4.71
28	E2_Db	KnownBoundary	0	3.01	0.00	38.37	8.37	4.41	3.61
29	E2b_E3a	KnownJunction	0	0.00	0.00	3.02	0.00	0.00	0.00
30	E2b_E6b	KnownJunction	0	59.89	5.85	118.75	23.65	26.80	7.56
31	E2b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
32	ER2h	ExonRegion	0	4.37	1.70	12.55	1.54	4.46	6.18
33	I2	Intron	0	7.34	1.50	21.10	5.96	20.73	5.12
34	I2_SR1	SilentIntronRegion	0	3.41	1.17	34.68	8.93	27.88	4.86
35	I2_AR1	ActiveIntronRegion	0	1.97	1.94	13.11	3.35	115.65	19.16
36	I2_SR2	SilentIntronRegion	0	4.83	1.25	29.45	8.16	9.18	0.86
37	I2_AR3	ActiveIntronRegion	0	48.72	8.22	12.59	2.07	273.39	72.85
38	I2_SR3	SilentIntronRegion	0	101.65	30.72	27.16	2.15	357.21	252.29
39	I2_AR4	ActiveIntronRegion	0	63.54	11.14	15.66	3.28	113.48	54.06
40	I2_SR5	SilentIntronRegion	0	4.82	1.35	25.11	4.36	46.89	4.14
41	I2_AR6	ActiveIntronRegion	0	19.11	2.90	18.59	4.14	183.05	32.36
42	I2_AR7	ActiveIntronRegion	0	1.21	0.64	20.42	6.15	1.31	1.06
43	I2_SR10	SilentIntronRegion	0	7.08	1.26	19.86	6.40	2.09	0.94
44	ER3a	ExonRegion	0	4.73	0.00	30.09	9.13	0.45	0.46
45	I3_SR1	SilentIntronRegion	0	4.95	0.77	17.84	5.96	7.69	2.72
46	I3_SR2	SilentIntronRegion	0	8.54	2.43	23.22	7.76	21.11	8.98
47	I3_AR2	ActiveIntronRegion	0	4.71	0.00	41.03	10.25	0.39	0.43
48	I3_SR4	SilentIntronRegion	0	0.00	0.00	23.65	9.40	0.00	0.00
49	I3_AR4	ActiveIntronRegion	0	0.76	1.44	18.27	8.94	0.00	0.00
50	I3_AR5	ActiveIntronRegion	0	4.47	2.81	19.06	6.25	0.00	0.00
51	I3_AR6	ActiveIntronRegion	0	6.49	0.81	21.06	6.23	203.70	47.41
52	I3_SR6	SilentIntronRegion	0	4.16	4.77	25.90	8.48	1.31	0.30
53	I3_AR7	ActiveIntronRegion	0	5.62	2.52	37.49	11.62	4.06	0.73
54	I3_AR8	ActiveIntronRegion	0	4.16	4.56	25.04	9.41	0.50	0.00
55	I3_SR1	SilentIntronRegion	0	5.87	1.46	20.58	7.42	24.62	21.29
56	Ix	Intron	0	3.77	0.70	17.08	7.17	3.84	5.80
57	Ix_SR1	SilentIntronRegion	0	3.77	0.70	17.10	7.18	3.84	5.81
58	I3	Intron	0	1.25	2.46	20.56	10.19	23.53	1.64
59	I3_AR1	ActiveIntronRegion	0	1.26	2.48	20.71	10.27	23.71	1.66
60	Ix_AR1	ActiveIntronRegion	0	3.69	0.00	5.43	7.00	0.00	0.00
61	I3_AR2	ActiveIntronRegion	0	1.04	2.45	23.08	6.64	5.39	6.09
62	I3_SR2	SilentIntronRegion	1	4.22	2.63	6.81	5.89	9.04	18.39
63	I3_AR3	ActiveIntronRegion	1	1.16	2.08	2.39	0.32	9.67	19.62
64	ER4a	ExonRegion	0	9.18	5.06	25.04	10.53	2.27	0.02
65	E4a_E6b	KnownJunction	0	23.26	8.10	3.47	6.25	25.64	0.00
66	I4_AR1	ActiveIntronRegion	0	25.98	4.11	10.06	5.87	0.90	0.00
67	ER5a	ExonRegion	0	0.00	0.00	1.52	0.00	0.00	0.00
68	ER6a	ExonRegion	0	15.84	5.71	43.45	8.62	9.49	0.93
69	ER6b	ExonRegion	0	62.76	25.23	160.47	42.05	44.71	8.09
70	E6a_E7a	KnownJunction	0	91.59	30.09	245.46	62.96	68.84	26.78
71	E6a_E10a	NovelJunction	0	0.00	6.19	0.00	0.00	0.00	0.00
72	ER7a	ExonRegion	0	64.40	15.92	132.84	40.64	94.29	15.75
73	E7a_E9a	KnownJunction	0	61.22	28.12	133.66	43.66	270.02	53.23
74	I7_AR3	ActiveIntronRegion	0	2.94	0.53	11.55	6.87	0.70	0.00
75	Ix_AR1	ActiveIntronRegion	0	0.47	0.00	14.10	6.94	0.00	0.00
76	E8_Aa	NovelBoundary	0	15.85	0.00	18.27	9.68	0.00	0.00
77	ER8a	ExonRegion	0	7.93	1.59	13.32	9.66	0.00	0.00
78	E8_Da	NovelBoundary	0	30.07	3.15	30.46	24.79	0.00	0.00
79	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
80	ER9a	ExonRegion	0	87.22	26.85	244.26	68.29	87.46	19.07
81	E9_Da	KnownBoundary	0	111.71	47.30	264.36	78.51	171.63	16.71
82	ER9b	ExonRegion	0	134.87	45.63	316.92	121.78	155.91	21.69
83	E9b_E10a	KnownJunction	0	169.74	61.76	505.38	149.47	302.31	78.67
84	E10_Aa	NovelBoundary	0	6.51	0.00	0.00	10.00	0.00	0.00
85	ER10a	ExonRegion	0	167.23	65.23	557.25	186.85	175.62	41.41
86	E10_Da	KnownBoundary	0	189.26	78.46	461.21	188.29	350.92	79.25
87	ER10b	ExonRegion	1	181.52	41.81	229.95	94.85	156.92	57.82
88	E10_Db	KnownBoundary	0	107.92	18.50	68.94	21.42	185.03	75.14
89	E10_Dc	KnownBoundary	0	123.53	45.50	317.02	120.49	145.16	120.06
90	ER10c	ExonRegion	0	176.72	45.71	301.98	121.28	144.82	90.71
91	ER10d	ExonRegion	0	74.04	26.86	232.46	60.15	255.66	83.00
92	E10_Dd	KnownBoundary	1	36.09	13.27	350.21	58.99	296.40	16.96
93	ER10e	ExonRegion	1	67.59	6.63	167.73	30.26	868.46	128.22
94	E10_De	KnownBoundary	0	310.56	69.13	378.73	86.83	810.80	111.33
95	ER10f	ExonRegion	0	152.04	22.95	177.13	27.55	1093.73	146.32
96	E10_Df	KnownBoundary	1	183.18	43.08	324.76	38.88	2005.06	485.69
97	ER10g	ExonRegion	0	249.55	57.25	247.73	45.17	1002.27	221.23
98	IG50_AR7	ActiveIntergenicRegion	0	231.21	63.44	128.06	46.21	7.46	0.00
99	IG50_SR7	SilentIntergenicRegion	0	68.29	11.10	55.37	16.56	9.19	0.00
100	IG50_AR6	ActiveIntergenicRegion	0	79.86	10.20	85.35	20.75	21.00	4.25
101	IG50_SR6	SilentIntergenicRegion	0	33.89	1.93	33.77	9.11	14.08	0.00
102	IG50_AR5	ActiveIntergenicRegion	0	156.00	17.36	105.83	23.19	262.85	34.33
103	IG50_SR5	SilentIntergenicRegion	0	552.18	76.59	183.36	30.73	674.99	185.12
104	IG50_AR4	ActiveIntergenicRegion	0	352.01	75.95	67.95	25.13	887.43	202.71
105	IG50_SR4	SilentIntergenicRegion	0	475.05	85.42	59.71	23.45	1290.29	239.86
106	IG50_AR3	ActiveIntergenicRegion	0	382.42	48.44	78.43	13.20	970.70	205.92