Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	SCHIP1	Gene	0	10.14	4.95	17.55	6.61	21.03	11.62
2	486290	Transcript	0	6.03	0.85	40.18	8.41	7.06	2.62
3	406623	Transcript	0	0.00	0.00	0.00	0.00	5.16	0.00
4	412423	Transcript	0	0	0	0	0	0	0
5	467377	Transcript	0	0.00	0.02	1.97	1.25	0.00	0.00
6	460298	Transcript	0	3.92	4.44	1.15	0.00	4.50	10.14
7	472451	Transcript	0	1.26	0.00	0.66	0.00	1.05	1.12
8	337808	Transcript	0	0	0	0	0	0	0
9	473061	Transcript	0	0	0	0	0	0	0
10	445224	Transcript	0	0.00	6.10	2.12	1.66	4.47	0.00
11	461058	Transcript	0	0	0	0	0	0	0
12	495954	Transcript	0	0	0	0	0	0	0
13	483730	Transcript	0	4.28	4.34	6.09	5.91	0.21	0.86
14	472483	Transcript	0	0	0	0	0	0	0
15	482804	Transcript	0	3.13	0.73	6.32	1.52	0.00	0.00
16	482885	Transcript	0	8.59	2.68	16.73	6.49	23.94	11.92
17	475932	Transcript	0	0	0	0	0	0	0
18	ER1a	ExonRegion	0	8.54	0.31	80.36	16.81	5.69	0.00
19	E1_Ab	KnownBoundary	0	14.58	0.00	72.18	17.34	12.32	0.00
20	ER1b	ExonRegion	0	13.97	0.24	43.70	11.63	4.12	0.00
21	E1_Da	NovelBoundary	0	0.00	0.00	23.79	13.38	0.00	0.00
22	E1a_E4a	KnownJunction	0	5.91	2.59	9.34	7.50	4.99	0.00
23	E1a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	5.16	0.00
24	Ix	Intron	0	7.82	1.83	29.72	9.09	9.97	3.87
25	Ix_SR1	SilentIntronRegion	0	6.49	1.84	28.60	8.88	12.18	5.00
26	Ix_AR1	ActiveIntronRegion	0	1.80	0.00	20.12	7.04	1.93	8.07
27	Ix_SR2	SilentIntronRegion	0	16.05	2.94	30.00	9.54	12.58	3.49
28	Ix_AR2	ActiveIntronRegion	0	8.92	0.00	38.56	7.16	0.00	0.00
29	Ix_SR3	SilentIntronRegion	0	3.62	0.95	31.97	9.29	3.38	1.72
30	Ix	Intron	0	6.55	2.22	20.53	7.92	11.15	5.48
31	Ix_SR1	SilentIntronRegion	0	8.83	2.62	26.89	9.75	13.94	7.40
32	Ix_AR1	ActiveIntronRegion	0	6.61	1.00	18.67	5.90	111.87	43.84
33	Ix_AR2	ActiveIntronRegion	0	44.46	34.46	13.17	6.97	292.39	89.11
34	Ix_SR2	SilentIntronRegion	0	2.88	1.40	23.04	8.72	3.58	2.47
35	Ix_AR3	ActiveIntronRegion	0	1.61	1.20	20.67	12.62	0.00	0.00
36	Ix_SR3	SilentIntronRegion	0	2.96	1.58	14.71	6.53	10.60	5.44
37	Ix_AR4	ActiveIntronRegion	0	30.19	6.82	13.06	9.27	47.12	8.22
38	Ix_SR4	SilentIntronRegion	0	11.53	3.24	11.88	4.82	13.15	4.59
39	Ix_AR5	ActiveIntronRegion	0	3.65	0.80	21.82	6.90	9.29	0.00
40	Ix_SR5	SilentIntronRegion	0	1.51	0.00	11.18	4.54	0.51	0.00
41	Ix_AR6	ActiveIntronRegion	0	4.85	0.00	9.46	2.20	1.62	0.00
42	Ix_SR6	SilentIntronRegion	0	18.25	5.05	9.16	4.46	8.38	3.15
43	Ix_SR1	SilentIntronRegion	0	3.12	1.08	10.54	5.07	2.08	0.70
44	Ix_AR3	ActiveIntronRegion	0	4.21	1.04	2.71	3.22	155.42	76.57
45	Ix_SR4	SilentIntronRegion	0	11.62	1.39	5.47	2.32	34.08	3.39
46	Ix_AR4	ActiveIntronRegion	0	33.03	8.81	10.88	3.10	72.87	24.18
47	Ix_SR5	SilentIntronRegion	0	10.49	5.63	3.66	2.50	8.55	4.70
48	E2_Aa	NovelBoundary	0	0.00	6.97	0.00	0.00	0.00	0.00
49	ER2a	ExonRegion	0	0.00	0.05	1.15	0.00	0.00	0.00
50	E2_Da	NovelBoundary	0	0.00	5.74	0.00	0.00	0.00	0.00
51	E2a_E4a	KnownJunction	0	0.00	0.00	2.79	2.50	0.00	0.00
52	ER3a	ExonRegion	0	1.15	5.40	2.30	0.00	1.09	1.72
53	E3_Ab	NovelBoundary	0	5.72	6.97	0.00	0.00	3.41	8.14
54	E3a_E4a	KnownJunction	0	6.69	3.49	0.00	0.00	7.91	18.55
55	ER3b	ExonRegion	0	2.64	2.08	0.00	0.00	2.94	1.85
56	ER3c	ExonRegion	0	2.51	0.00	1.31	0.00	2.11	2.23
57	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
58	ER4a	ExonRegion	0	2.50	3.63	3.61	0.12	1.09	0.40
59	E4_Da	KnownBoundary	0	0.00	3.04	3.47	0.00	8.82	0.00
60	ER4b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
61	E4_Db	KnownBoundary	0	0.00	11.08	0.00	0.00	4.16	0.00
62	ER4c	ExonRegion	0	0.75	0.79	0.03	0.00	2.42	0.00
63	E4_Dc	KnownBoundary	0	3.56	0.00	0.00	2.66	0.00	5.12
64	E4c_E8a	KnownJunction	0	0.00	3.15	0.00	0.00	22.31	0.00
65	E4_Ab	KnownBoundary	0	0.00	2.87	0.00	0.00	5.08	3.61
66	ER4d	ExonRegion	0	2.11	0.00	0.00	0.00	1.81	1.85
67	ER4e	ExonRegion	0	3.26	0.00	0.00	0.00	1.81	1.85
68	E4d_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
69	Ix	Intron	0	1.03	0.78	10.83	7.59	0.75	1.73
70	Ix_SR1	SilentIntronRegion	0	1.12	0.82	14.49	11.21	0.43	1.22
71	Ix_SR3	SilentIntronRegion	0	1.03	0.34	12.67	4.19	0.29	0.00
72	Ix_AR2	ActiveIntronRegion	0	2.11	0.00	11.92	12.21	0.05	0.00
73	Ix_AR3	ActiveIntronRegion	0	3.09	0.87	12.28	8.12	0.00	2.71
74	Ix_AR4	ActiveIntronRegion	0	3.37	3.01	8.39	5.69	0.58	7.61
75	Ix_AR5	ActiveIntronRegion	0	0.00	0.37	7.71	2.58	0.96	12.59
76	Ix_SR5	SilentIntronRegion	0	1.25	1.68	9.75	4.25	0.06	0.19
77	Ix_SR2	SilentIntronRegion	0	0.70	0.22	10.74	5.26	1.20	1.22
78	Ix_AR2	ActiveIntronRegion	0	0.82	0.81	4.58	7.14	0.00	1.08
79	Ix_SR3	SilentIntronRegion	0	0.53	1.07	8.49	2.97	11.71	5.84
80	Ix_AR3	ActiveIntronRegion	0	2.77	0.76	8.42	4.32	46.80	34.83
81	Ix_AR4	ActiveIntronRegion	0	0.66	2.05	6.85	11.12	0.00	0.00
82	Ix_AR5	ActiveIntronRegion	0	2.05	2.04	9.57	2.11	0.44	0.00
83	E5_Aa	NovelBoundary	0	13.14	5.40	23.11	17.13	30.71	7.72
84	ER5a	ExonRegion	0	0.00	6.10	2.12	1.66	4.47	0.00
85	E5_Ab	KnownBoundary	0	0.00	5.23	0.00	2.61	8.32	0.00
86	E5_Ac	KnownBoundary	0	0.00	2.92	0.00	0.00	0.00	0.00
87	ER5b	ExonRegion	0	0.00	10.39	0.00	2.15	7.23	0.00
88	ER5c	ExonRegion	0	44.07	30.80	23.26	13.23	6.25	0.00
89	E5_Ad	KnownBoundary	0	61.22	18.28	52.31	17.94	7.99	0.00
90	ER5d	ExonRegion	0	55.49	23.49	62.95	22.87	4.96	0.00
91	E5_Ae	KnownBoundary	0	65.02	15.47	70.76	26.53	14.40	4.11
92	ER5e	ExonRegion	0	91.85	45.53	60.57	28.15	33.60	17.32
93	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
94	E5a_E8a	KnownJunction	0	144.37	44.55	42.18	28.44	72.66	57.09
95	Ix	Intron	0	3.20	1.22	12.22	7.11	0.31	0.05
96	Ix_SR1	SilentIntronRegion	0	3.20	1.22	12.22	7.11	0.31	0.05
97	E6_Aa	NovelBoundary	0	10.91	8.44	2.85	7.78	24.22	23.76
98	ER6a	ExonRegion	0	8.57	8.68	12.17	11.82	0.42	1.72
99	E6_Da	NovelBoundary	0	7.83	3.26	14.12	11.80	0.00	0.00
100	Ix	Intron	0	2.81	2.10	10.43	6.14	6.70	5.52
101	Ix_SR1	SilentIntronRegion	0	2.81	2.11	10.44	6.14	6.70	5.52
102	E7_Aa	NovelBoundary	0	0.00	0.00	12.64	0.00	0.00	0.00
103	ER7a	ExonRegion	0	3.13	0.73	6.32	1.52	0.00	0.00
104	E7_Ab	KnownBoundary	0	7.47	2.76	15.20	3.10	0.00	0.00
105	ER7b	ExonRegion	0	4.42	4.33	7.48	5.45	0.36	1.30
106	E7_Da	NovelBoundary	1	3.13	0.00	42.75	3.32	0.00	0.00
107	E7a_E8a	KnownJunction	0	13.44	0.00	2.73	0.00	0.00	3.95
108	Ix	Intron	0	0.79	1.13	8.74	5.17	0.56	1.75
109	Ix_AR1	ActiveIntronRegion	0	0.00	0.93	6.19	5.11	3.68	19.97
110	Ix_SR2	SilentIntronRegion	0	0.98	2.35	7.73	5.90	1.25	7.68
111	Ix_AR2	ActiveIntronRegion	0	0.46	2.71	12.84	6.23	1.57	0.20
112	Ix_SR3	SilentIntronRegion	0	2.40	1.39	9.67	5.37	4.10	3.77
113	ER8a	ExonRegion	0	97.17	54.91	68.53	24.89	37.97	39.26
114	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
115	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
116	Ix	Intron	0	4.34	1.91	10.79	8.50	13.25	5.44
117	Ix_SR1	SilentIntronRegion	0	2.49	1.03	11.42	9.18	12.56	2.10
118	Ix_AR1	ActiveIntronRegion	0	20.43	9.49	12.73	10.23	118.64	51.35
119	Ix_SR2	SilentIntronRegion	0	9.67	2.71	11.79	8.47	2.00	0.62
120	Ix_AR2	ActiveIntronRegion	0	14.42	5.20	20.74	16.88	33.05	18.73
121	Ix_SR3	SilentIntronRegion	0	1.32	0.82	9.65	6.61	0.79	2.90
122	Ix_AR3	ActiveIntronRegion	0	0.56	1.86	10.68	13.14	0.00	0.46
123	Ix_SR4	SilentIntronRegion	0	0.68	0.83	7.45	5.74	0.74	0.28
124	ER9a	ExonRegion	0	47.42	16.23	28.81	8.20	35.38	16.03
125	E9_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
126	E9a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
127	ER9b	ExonRegion	0	1.54	0.00	32.55	9.28	1.70	1.78
128	E9_Db	KnownBoundary	0	0.00	3.15	11.56	6.74	0.00	5.21
129	ER9c	ExonRegion	0	2.85	2.26	12.47	3.77	1.46	0.99
130	E9_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
131	ER9d	ExonRegion	0	12.21	5.29	14.01	5.04	7.20	1.60
132	E9_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
133	E9c_E9d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
134	ER9e	ExonRegion	0	12.98	1.77	10.79	3.57	12.01	4.65
135	E9_Dd	KnownBoundary	1	15.91	5.91	23.34	0.00	14.65	8.40
136	ER9f	ExonRegion	0	17.77	4.68	21.82	8.88	18.10	7.76
137	E9_Ac	KnownBoundary	0	27.30	3.32	25.79	8.59	56.27	44.75
138	E9_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
139	ER9g	ExonRegion	0	30.77	5.49	31.27	6.46	44.49	24.93
140	ER9h	ExonRegion	0	18.71	3.88	16.25	3.17	22.43	11.84
141	E9e_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
142	Ix	Intron	0	5.03	1.38	10.44	5.89	10.38	6.80
143	Ix_SR1	SilentIntronRegion	0	0.37	0.00	6.52	7.10	4.57	0.00
144	Ix_AR1	ActiveIntronRegion	0	2.11	0.00	13.04	12.93	5.42	0.00
145	Ix_SR2	SilentIntronRegion	0	7.28	1.24	20.95	13.30	27.33	9.97
146	Ix_AR2	ActiveIntronRegion	0	7.21	2.88	8.14	4.23	26.82	14.34
147	Ix_SR3	SilentIntronRegion	0	4.26	1.13	9.01	4.82	4.15	4.85
148	ER10a	ExonRegion	0	12.15	30.55	10.58	0.00	15.23	29.86
149	E10_Da	KnownBoundary	0	21.87	21.09	19.35	3.32	17.81	17.21
150	ER10b	ExonRegion	0	10.24	11.21	16.20	5.35	7.12	10.10
151	E10_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00
152	E10b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
153	ER10c	ExonRegion	0	4.29	2.28	14.97	10.22	4.01	0.00
154	E10_Dc	KnownBoundary	0	2.47	0.00	0.00	2.88	9.07	0.00
155	ER10d	ExonRegion	0	5.16	1.09	15.89	6.83	52.26	27.02
156	E10_Dd	NovelBoundary	0	2.77	0.00	9.68	0.00	0.00	0.00
157	Ix	Intron	0	15.42	5.99	13.14	6.61	10.93	5.94
158	Ix_SR1	SilentIntronRegion	0	15.44	6.00	13.16	6.62	10.94	5.95
159	ER11a	ExonRegion	0	1.76	4.17	0.00	0.47	4.13	7.77
160	E11_Da	KnownBoundary	0	44.05	51.97	10.65	2.77	273.84	157.67
161	ER11b	ExonRegion	0	18.74	6.98	0.00	0.00	118.05	62.42
162	E11_Db	KnownBoundary	1	37.66	53.55	0.00	0.00	322.45	702.80
163	ER11c	ExonRegion	0	28.13	9.41	0.00	0.00	162.14	117.74
164	ER11d	ExonRegion	0	44.34	14.54	0.00	0.00	273.01	170.31
165	ER11e	ExonRegion	0	42.44	14.13	0.00	0.00	267.04	167.16
166	ER11f	ExonRegion	0	3.52	1.39	0.00	0.00	8.44	5.25
167	IG44_SR1	SilentIntergenicRegion	0	0.00	0.00	11.54	0.00	2.83	0.00