Order	SeqName	SeqType	IsAE	Frontal_mRNA	Amygdala_mRNA	Frontal_Ribo	Amygdala_Ribo	Frontal_Ampl	Amygdala_Ampl
1	STAG1	Gene	0	5.95	6.04	16.09	14.72	6.11	5.07
2	483235	Transcript	0	0.00	0.61	0.87	0.00	0.00	0.00
3	236698	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
4	487065	Transcript	0	1.39	0.03	1.04	0.50	1.27	0.00
5	383202	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
6	480733	Transcript	0	0.00	0.21	3.92	3.37	2.68	4.75
7	462818	Transcript	0	1.56	0.47	4.16	1.78	32.15	20.44
8	492318	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
9	465961	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1b	ExonRegion	0	0.00	0.00	0.24	0.00	0.00	0.00
12	ER1c	ExonRegion	0	0.00	0.00	5.43	0.00	0.00	0.00
13	ER1d	ExonRegion	0	0.49	2.15	11.83	6.49	0.49	8.54
14	E1a_E2a	KnownJunction	0	6.93	3.04	22.26	12.40	5.08	78.67
15	I1_AR1	ActiveIntronRegion	0	0.00	0.43	0.00	0.00	10.32	2.53
16	I1_SR2	SilentIntronRegion	0	6.51	1.51	4.19	2.46	31.51	14.76
17	I1_AR2	ActiveIntronRegion	0	12.18	5.65	4.45	2.66	130.32	201.97
18	I1_AR4	ActiveIntronRegion	0	6.35	5.47	3.35	1.01	2.25	1.03
19	I1_AR5	ActiveIntronRegion	0	12.27	1.63	7.93	3.35	45.72	27.83
20	ER2a	ExonRegion	0	5.50	6.12	35.61	20.52	0.48	14.23
21	E2a_E3a	KnownJunction	0	9.76	13.61	60.74	57.58	0.00	45.92
22	ER3a	ExonRegion	0	13.20	17.99	27.15	40.74	1.93	12.51
23	E3a_E4a	KnownJunction	0	17.96	11.92	20.38	29.09	4.66	3.44
24	I3_AR1	ActiveIntronRegion	0	7.03	0.80	3.07	7.29	0.00	0.00
25	ER4a	ExonRegion	0	15.53	12.05	32.79	34.81	1.86	0.96
26	E4a_E5a	KnownJunction	0	0.00	0.00	3.19	0.00	0.00	0.00
27	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
28	E4a_E7a	KnownJunction	0	10.42	0.00	14.74	16.96	9.16	0.00
29	ER5a	ExonRegion	0	0.00	0.00	1.14	0.00	0.00	0.00
30	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
31	ER6a	ExonRegion	0	1.28	1.26	6.60	3.88	0.00	0.00
32	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
33	ER7a	ExonRegion	0	5.07	0.00	23.88	19.90	6.60	2.90
34	E7a_E8a	KnownJunction	0	5.72	0.00	15.54	21.80	4.99	0.00
35	ER8a	ExonRegion	0	5.62	1.21	16.90	17.49	2.89	1.01
36	E8a_E9a	KnownJunction	0	10.12	8.27	21.40	20.23	9.74	5.21
37	ER9a	ExonRegion	0	3.97	5.85	21.28	31.45	3.35	0.57
38	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	2.61	0.00	4.28
39	E9a_E11a	KnownJunction	0	3.74	0.00	15.20	12.07	0.00	0.00
40	I9_SR3	SilentIntronRegion	0	0.86	0.22	6.72	5.90	0.33	5.90
41	I9_AR3	ActiveIntronRegion	0	1.08	0.46	6.83	7.62	0.31	3.64
42	E10_Aa	NovelBoundary	0	3.43	3.49	9.34	6.04	4.49	15.36
43	ER10a	ExonRegion	0	1.91	1.34	5.95	9.42	0.82	4.76
44	E10_Da	KnownBoundary	0	0.00	2.92	2.79	2.94	4.33	10.16
45	E10a_E11a	KnownJunction	0	0.00	3.04	0.00	0.00	0.00	0.00
46	ER10b	ExonRegion	0	0.00	0.21	3.92	3.37	2.68	4.75
47	E10_Db	NovelBoundary	0	0.00	0.00	6.55	9.52	0.00	0.00
48	E11_Aa	NovelBoundary	0	0.00	0.00	5.98	3.04	9.49	5.21
49	ER11a	ExonRegion	0	5.65	4.13	36.58	43.75	17.15	7.23
50	E11a_E12a	KnownJunction	0	0.00	8.61	21.06	23.87	23.64	10.24
51	E12_Aa	NovelBoundary	0	0.00	0.00	3.53	8.92	0.00	9.65
52	ER12a	ExonRegion	0	5.56	8.14	22.11	36.01	16.25	9.18
53	E12_Da	KnownBoundary	0	6.57	3.26	3.53	0.00	36.12	13.18
54	E12a_E13a	KnownJunction	0	0.00	13.95	17.87	33.60	4.91	8.98
55	ER12b	ExonRegion	0	1.56	0.47	4.16	1.78	32.15	20.44
56	E12_Db	NovelBoundary	0	0.00	5.29	3.53	2.45	8.74	0.00
57	ER13a	ExonRegion	0	2.67	5.58	20.69	23.87	2.07	3.46
58	E13a_E14a	KnownJunction	0	0.00	3.49	21.29	15.61	8.32	7.81
59	E14_Aa	NovelBoundary	0	0.00	0.00	0.00	6.74	0.00	0.00
60	ER14a	ExonRegion	0	2.23	16.80	25.39	22.59	4.80	2.49
61	E14_Ab	KnownBoundary	0	3.74	26.21	37.86	35.99	13.40	4.53
62	ER14b	ExonRegion	0	1.55	20.78	44.84	29.79	5.82	0.64
63	E14a_E15a	KnownJunction	1	2.65	10.46	74.12	14.35	14.82	0.00
64	ER15a	ExonRegion	0	2.69	19.50	52.41	27.79	4.34	1.48
65	E15a_E16a	KnownJunction	0	6.09	24.80	30.68	30.83	16.40	3.61
66	E15a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
67	ER16a	ExonRegion	0	6.63	16.08	48.62	32.51	5.61	1.59
68	E16a_E17a	KnownJunction	0	9.94	19.29	78.90	48.72	8.74	8.90
69	ER17a	ExonRegion	0	5.27	12.56	33.61	14.84	2.72	3.41
70	E17a_E18a	KnownJunction	0	6.57	8.49	31.54	17.78	9.66	9.99
71	I17_AR2	ActiveIntronRegion	0	1.32	1.30	0.90	0.45	9.40	3.47
72	ER18a	ExonRegion	0	10.57	9.53	21.63	16.92	5.38	6.53
73	E18a_E19a	KnownJunction	0	17.17	6.36	25.90	27.68	4.25	4.79
74	ER19a	ExonRegion	0	5.75	12.27	28.74	18.00	3.62	2.17
75	E19_Da	NovelBoundary	0	0.00	0.00	0.00	3.37	16.73	12.51
76	E19a_E20a	KnownJunction	0	6.93	2.70	24.36	16.48	0.00	0.00
77	E20_Aa	NovelBoundary	0	6.27	0.00	0.00	5.44	0.00	0.00
78	ER20a	ExonRegion	0	8.04	4.13	38.61	21.91	3.21	0.08
79	E20b_E21a	KnownJunction	0	9.82	10.46	60.34	38.82	9.24	0.00
80	ER20b	ExonRegion	0	6.33	8.31	67.78	36.62	4.70	0.00
81	ER21a	ExonRegion	0	6.45	5.06	53.71	30.14	2.87	0.00
82	E21a_E22a	KnownJunction	0	6.33	6.36	18.79	12.61	9.49	0.00
83	ER22a	ExonRegion	0	8.05	10.09	38.73	42.18	2.97	0.08
84	E22a_E23a	KnownJunction	0	9.94	17.66	25.39	30.83	8.82	0.00
85	ER23a	ExonRegion	0	4.76	18.96	26.50	36.90	2.78	2.53
86	E23a_E24a	KnownJunction	1	2.89	6.52	12.87	34.64	0.00	7.39
87	ER24a	ExonRegion	0	4.99	10.62	42.14	45.56	3.12	2.57
88	E24_Da	KnownBoundary	0	3.37	0.00	0.00	0.00	3.75	0.00
89	E24a_E25a	KnownJunction	0	2.89	3.49	44.17	23.43	0.00	0.00
90	ER24b	ExonRegion	0	2.78	0.05	2.08	1.00	2.54	0.00
91	I24_AR1	ActiveIntronRegion	0	1.75	0.00	0.46	0.46	14.72	10.28
92	ER25a	ExonRegion	0	2.14	8.59	28.38	17.66	0.00	0.00
93	E25a_E26a	KnownJunction	0	3.25	6.86	20.21	12.83	0.00	0.00
94	I25_AR2	ActiveIntronRegion	0	1.92	0.00	4.35	0.00	20.55	7.91
95	I25_AR3	ActiveIntronRegion	0	2.11	0.00	3.72	0.00	17.05	7.40
96	I25_AR4	ActiveIntronRegion	0	2.11	0.00	3.86	0.96	17.68	4.94
97	ER26a	ExonRegion	0	2.00	11.64	22.12	26.92	0.14	0.00
98	E26a_E27a	KnownJunction	0	3.74	0.00	35.01	38.71	0.00	0.00
99	E27_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	12.59
100	ER27a	ExonRegion	0	4.62	7.47	19.64	22.18	0.77	3.22
101	E27a_E28a	KnownJunction	0	3.68	22.22	21.46	19.47	0.00	0.00
102	E28_Aa	NovelBoundary	0	0.00	0.00	12.18	0.00	4.58	0.00
103	ER28a	ExonRegion	0	6.53	5.76	19.77	18.40	1.89	2.01
104	E28a_E29a	KnownJunction	0	19.16	16.65	38.82	20.72	0.00	0.00
105	E28a_E30a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
106	ER29a	ExonRegion	0	16.83	7.78	33.87	20.55	1.38	7.17
107	E29_Da	NovelBoundary	0	7.47	0.00	0.00	3.32	10.32	0.00
108	E29a_E30a	KnownJunction	0	14.10	5.51	33.70	17.34	0.00	4.37
109	ER30a	ExonRegion	0	12.90	8.04	19.53	22.10	2.04	5.33
110	E30_Ab	KnownBoundary	0	18.26	11.92	15.83	28.49	4.99	4.37
111	ER30b	ExonRegion	0	21.01	9.63	33.38	28.90	1.23	3.30
112	E30a_E31a	KnownJunction	0	28.50	11.92	48.79	36.16	3.83	8.90
113	ER31a	ExonRegion	0	14.53	12.29	23.76	24.93	3.99	3.70
114	E31_Da	NovelBoundary	0	9.40	0.00	3.30	5.55	8.41	0.00
115	E31a_E32a	KnownJunction	0	17.05	24.92	21.40	16.09	4.16	5.04
116	ER32a	ExonRegion	0	9.99	16.84	16.27	14.59	4.51	5.15
117	E32_Da	KnownBoundary	0	0.00	0.00	2.62	0.00	5.16	0.00
118	E32a_E33a	KnownJunction	0	12.83	31.22	20.61	19.25	5.16	14.78
119	ER32b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00
120	E32_Db	NovelBoundary	0	6.63	0.00	0.00	3.04	24.55	32.66
121	I32_AR1	ActiveIntronRegion	0	3.07	0.32	2.46	0.00	4.80	9.35
122	ER33a	ExonRegion	0	14.57	11.72	19.99	19.61	7.13	3.53
123	E33a_E34a	KnownJunction	0	27.84	15.52	31.25	40.89	17.40	15.20
124	E33a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00
125	ER34a	ExonRegion	0	22.37	11.04	14.13	28.98	3.31	3.59
126	E34_Da	NovelBoundary	0	8.32	0.00	0.00	2.34	0.00	0.00
127	E34a_E35a	KnownJunction	0	6.57	23.96	14.17	21.04	4.08	4.37
128	ER35a	ExonRegion	0	16.05	14.78	25.79	27.35	8.69	4.43
129	E35a_E36a	KnownJunction	0	28.62	20.81	14.12	24.79	14.15	0.00
130	ER36a	ExonRegion	0	11.26	21.55	21.22	18.11	5.13	10.81
131	E36a_E37a	KnownJunction	0	5.84	22.10	24.31	2.23	8.32	36.44
132	E37_Aa	NovelBoundary	0	10.67	0.00	12.69	3.37	0.00	0.00
133	ER37a	ExonRegion	0	12.07	6.55	11.44	8.90	14.88	11.50
134	E37_Da	KnownBoundary	0	3.43	8.16	0.00	0.00	10.07	3.53
135	ER37b	ExonRegion	0	0.55	0.54	0.00	0.28	2.02	2.31
136	ER37c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00